RNA–Protein interactions for RNA: ENST00000556167.1

PSMA6-212, Transcript of proteasome subunit alpha 6, humanhuman

TSL 2

Gene PSMA6, Length 601 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA6-212ENST00000556167 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.35■□□□□ 0.53
PSMA6-212ENST00000556167 GTF2IRD1Q9UHL9 959 aa18.35■□□□□ 0.53
PSMA6-212ENST00000556167 VAV3Q9UKW4 847 aa18.35■□□□□ 0.53
PSMA6-212ENST00000556167 DKC1O60832 514 aaKnown RBP eCLIP18.34■□□□□ 0.53
PSMA6-212ENST00000556167 CD4P01730 458 aa18.34■□□□□ 0.53
PSMA6-212ENST00000556167 TXKP42681 527 aa18.34■□□□□ 0.53
PSMA6-212ENST00000556167 RESTQ13127 1097 aa18.34■□□□□ 0.53
PSMA6-212ENST00000556167 TMEM266Q2M3C6 531 aa18.34■□□□□ 0.53
PSMA6-212ENST00000556167 SWSAP1Q6NVH7 229 aa18.34■□□□□ 0.53
PSMA6-212ENST00000556167 PDXDC2PQ6P474 469 aa18.34■□□□□ 0.53
PSMA6-212ENST00000556167 CCDC60Q8IWA6 550 aaPredicted RBP18.34■□□□□ 0.53
PSMA6-212ENST00000556167 TMEM60Q9H2L4 133 aa18.34■□□□□ 0.53
PSMA6-212ENST00000556167 HDAC6Q9UBN7 1215 aa18.34■□□□□ 0.53
PSMA6-212ENST00000556167 GABBR1Q9UBS5 961 aa18.34■□□□□ 0.53
PSMA6-212ENST00000556167 CEP131Q9UPN4 1083 aa18.34■□□□□ 0.53
PSMA6-212ENST00000556167 NOD1Q9Y239 953 aa18.34■□□□□ 0.53
PSMA6-212ENST00000556167 PCDHB6Q9Y5E3 794 aa18.34■□□□□ 0.53
PSMA6-212ENST00000556167 MAFBQ9Y5Q3 323 aaPredicted RBP18.34■□□□□ 0.53
PSMA6-212ENST00000556167 EVPLQ92817 2033 aa18.33■□□□□ 0.53
PSMA6-212ENST00000556167 TNRC18O15417 2968 aaPredicted RBP18.33■□□□□ 0.53
PSMA6-212ENST00000556167 NRCAMQ92823 1304 aa18.33■□□□□ 0.53
PSMA6-212ENST00000556167 IGSF9BQ9UPX0 1349 aa18.33■□□□□ 0.53
PSMA6-212ENST00000556167 C17orf102A2RUQ5 167 aa18.33■□□□□ 0.52
PSMA6-212ENST00000556167 SMIM10L2AP0DMW4 78 aa18.33■□□□□ 0.52
PSMA6-212ENST00000556167 SMIM10L2BP0DMW5 78 aa18.33■□□□□ 0.52
PSMA6-212ENST00000556167 ANP32AP39687 249 aaKnown RBP18.33■□□□□ 0.52
PSMA6-212ENST00000556167 PRPHP41219 470 aa18.33■□□□□ 0.52
PSMA6-212ENST00000556167 PTGDRQ13258 359 aa18.33■□□□□ 0.52
PSMA6-212ENST00000556167 EPHA7Q15375 998 aa18.33■□□□□ 0.52
PSMA6-212ENST00000556167 ATP6V0A1Q93050 837 aa18.33■□□□□ 0.52
PSMA6-212ENST00000556167 FAM167AQ96KS9 214 aa18.33■□□□□ 0.52
PSMA6-212ENST00000556167 RAB34Q9BZG1 259 aa18.33■□□□□ 0.52
PSMA6-212ENST00000556167 LOXHD1Q8IVV2 1947 aa18.33■□□□□ 0.52
PSMA6-212ENST00000556167 POTEB3A0JP26 581 aa18.32■□□□□ 0.52
PSMA6-212ENST00000556167 HBP1O60381 514 aa18.32■□□□□ 0.52
PSMA6-212ENST00000556167 B4GALT4O60513 344 aa18.32■□□□□ 0.52
PSMA6-212ENST00000556167 MARK3P27448 753 aa18.32■□□□□ 0.52
PSMA6-212ENST00000556167 FAAP100Q0VG06 881 aa18.32■□□□□ 0.52
PSMA6-212ENST00000556167 NBR1Q14596 966 aa18.32■□□□□ 0.52
PSMA6-212ENST00000556167 PLCB4Q15147 1175 aa18.32■□□□□ 0.52
PSMA6-212ENST00000556167 PTGISQ16647 500 aa18.32■□□□□ 0.52
PSMA6-212ENST00000556167 NCAPH2Q6IBW4 605 aa18.32■□□□□ 0.52
PSMA6-212ENST00000556167 POTEBQ6S5H4 581 aa18.32■□□□□ 0.52
PSMA6-212ENST00000556167 CKAP2LQ8IYA6 745 aa18.32■□□□□ 0.52
PSMA6-212ENST00000556167 C4orf32Q8N8J7 132 aa18.32■□□□□ 0.52
PSMA6-212ENST00000556167 NEK9Q8TD19 979 aa18.32■□□□□ 0.52
PSMA6-212ENST00000556167 ATP8B4Q8TF62 1192 aa18.32■□□□□ 0.52
PSMA6-212ENST00000556167 BBXQ8WY36 941 aaPredicted RBP18.32■□□□□ 0.52
PSMA6-212ENST00000556167 RNPEPQ9H4A4 650 aa18.32■□□□□ 0.52
PSMA6-212ENST00000556167 PDLIM7Q9NR12 457 aa18.32■□□□□ 0.52
PSMA6-212ENST00000556167 TMEM39AQ9NV64 488 aa18.32■□□□□ 0.52
PSMA6-212ENST00000556167 DAXXQ9UER7 740 aaPredicted RBP18.32■□□□□ 0.52
PSMA6-212ENST00000556167 TRPC6Q9Y210 931 aa18.32■□□□□ 0.52
PSMA6-212ENST00000556167 STK24Q9Y6E0 443 aa18.32■□□□□ 0.52
PSMA6-212ENST00000556167 CEP290O15078 2479 aa18.32■□□□□ 0.52
PSMA6-212ENST00000556167 LTBP2Q14767 1821 aa18.32■□□□□ 0.52
PSMA6-212ENST00000556167 RRN3P2A6NIE6 340 aa18.31■□□□□ 0.52
PSMA6-212ENST00000556167 KIAA0355O15063 1070 aa18.31■□□□□ 0.52
PSMA6-212ENST00000556167 P4HBP07237 508 aaKnown RBP18.31■□□□□ 0.52
PSMA6-212ENST00000556167 ZSCAN22P10073 491 aaPredicted RBP18.31■□□□□ 0.52
PSMA6-212ENST00000556167 HOXC8P31273 242 aa18.31■□□□□ 0.52
PSMA6-212ENST00000556167 PSMC5P62195 406 aa18.31■□□□□ 0.52
PSMA6-212ENST00000556167 ATP2C1P98194 919 aaPredicted RBP18.31■□□□□ 0.52
PSMA6-212ENST00000556167 SPIRE1Q08AE8 756 aa18.31■□□□□ 0.52
PSMA6-212ENST00000556167 PPFIA1Q13136 1202 aa18.31■□□□□ 0.52
PSMA6-212ENST00000556167 ARL6IP4Q66PJ3 421 aaKnown RBP18.31■□□□□ 0.52
PSMA6-212ENST00000556167 GDF6Q6KF10 455 aaPredicted RBP18.31■□□□□ 0.52
PSMA6-212ENST00000556167 CCDC155Q8N6L0 562 aa18.31■□□□□ 0.52
PSMA6-212ENST00000556167 TRPV6Q9H1D0 765 aa18.31■□□□□ 0.52
PSMA6-212ENST00000556167 PRDM5Q9NQX1 630 aaPredicted RBP18.31■□□□□ 0.52
PSMA6-212ENST00000556167 NRBP2Q9NSY0 501 aa18.31■□□□□ 0.52
PSMA6-212ENST00000556167 TRMT13Q9NUP7 481 aaKnown RBP18.31■□□□□ 0.52
PSMA6-212ENST00000556167 COL1A2P08123 1366 aa18.3■□□□□ 0.52
PSMA6-212ENST00000556167 EML1O00423 815 aa18.3■□□□□ 0.52
PSMA6-212ENST00000556167 QARSP47897 775 aaKnown RBP18.3■□□□□ 0.52
PSMA6-212ENST00000556167 FXR2P51116 673 aaKnown RBP eCLIP18.3■□□□□ 0.52
PSMA6-212ENST00000556167 ZNF484Q5JVG2 852 aa18.3■□□□□ 0.52
PSMA6-212ENST00000556167 DTHD1Q6ZMT9 781 aa18.3■□□□□ 0.52
PSMA6-212ENST00000556167 ERMNQ8TAM6 284 aa18.3■□□□□ 0.52
PSMA6-212ENST00000556167 TBX21Q9UL17 535 aa18.3■□□□□ 0.52
PSMA6-212ENST00000556167 TANC1Q9C0D5 1861 aa18.29■□□□□ 0.52
PSMA6-212ENST00000556167 ARID2Q68CP9 1835 aa18.29■□□□□ 0.52
PSMA6-212ENST00000556167 F13A1P00488 732 aa18.29■□□□□ 0.52
PSMA6-212ENST00000556167 OATP04181 439 aa18.29■□□□□ 0.52
PSMA6-212ENST00000556167 RPLP2P05387 115 aaKnown RBP18.29■□□□□ 0.52
PSMA6-212ENST00000556167 INSRRP14616 1297 aa18.29■□□□□ 0.52
PSMA6-212ENST00000556167 RAG1P15918 1043 aa18.29■□□□□ 0.52
PSMA6-212ENST00000556167 TECP42680 631 aa18.29■□□□□ 0.52
PSMA6-212ENST00000556167 PTK7Q13308 1070 aa18.29■□□□□ 0.52
PSMA6-212ENST00000556167 BFSP2Q13515 415 aa18.29■□□□□ 0.52
PSMA6-212ENST00000556167 PDIA5Q14554 519 aa18.29■□□□□ 0.52
PSMA6-212ENST00000556167 GRIK4Q16099 956 aa18.29■□□□□ 0.52
PSMA6-212ENST00000556167 CAGE1Q8TC20 777 aa18.29■□□□□ 0.52
PSMA6-212ENST00000556167 LMBR1Q8WVP7 490 aa18.29■□□□□ 0.52
PSMA6-212ENST00000556167 ZNF396Q96N95 335 aaPredicted RBP18.29■□□□□ 0.52
PSMA6-212ENST00000556167 SETD4Q9NVD3 440 aa18.29■□□□□ 0.52
PSMA6-212ENST00000556167 TCHHQ07283 1943 aa18.28■□□□□ 0.52
PSMA6-212ENST00000556167 PRKCEQ02156 737 aa18.28■□□□□ 0.52
PSMA6-212ENST00000556167 SF3A1Q15459 793 aaKnown RBP18.28■□□□□ 0.52
PSMA6-212ENST00000556167 XKR3Q5GH77 459 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms