RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 KLF18A0A0U1RQI7 1052 aa7.55□□□□□ -1.2
SLIRP-203ENST00000554074 RRN3P2A6NIE6 340 aa7.55□□□□□ -1.2
SLIRP-203ENST00000554074 GOLGA8AA7E2F4 631 aa7.55□□□□□ -1.2
SLIRP-203ENST00000554074 GOLGA8BA8MQT2 603 aa7.55□□□□□ -1.2
SLIRP-203ENST00000554074 RFXAPO00287 272 aa7.55□□□□□ -1.2
SLIRP-203ENST00000554074 MEIS1O00470 390 aa7.55□□□□□ -1.2
SLIRP-203ENST00000554074 CHRNA1P02708 482 aa7.55□□□□□ -1.2
SLIRP-203ENST00000554074 BMP1P13497 986 aa7.55□□□□□ -1.2
SLIRP-203ENST00000554074 HSPA4P34932 840 aa7.55□□□□□ -1.2
SLIRP-203ENST00000554074 SLC26A2P50443 739 aa7.55□□□□□ -1.2
SLIRP-203ENST00000554074 SP4Q02446 784 aa7.55□□□□□ -1.2
SLIRP-203ENST00000554074 MGAT3Q09327 533 aa7.55□□□□□ -1.2
SLIRP-203ENST00000554074 PPFIA1Q13136 1202 aa7.55□□□□□ -1.2
SLIRP-203ENST00000554074 GRIK4Q16099 956 aa7.55□□□□□ -1.2
SLIRP-203ENST00000554074 PFKFB3Q16875 520 aaPredicted RBP7.55□□□□□ -1.2
SLIRP-203ENST00000554074 CEP55Q53EZ4 464 aa7.55□□□□□ -1.2
SLIRP-203ENST00000554074 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.55□□□□□ -1.2
SLIRP-203ENST00000554074 PLPPR4Q7Z2D5 763 aa7.55□□□□□ -1.2
SLIRP-203ENST00000554074 TMCO2Q7Z6W1 182 aaPredicted RBP7.55□□□□□ -1.2
SLIRP-203ENST00000554074 RSPH3Q86UC2 560 aa7.55□□□□□ -1.2
SLIRP-203ENST00000554074 MYOCDQ8IZQ8 938 aa7.55□□□□□ -1.2
SLIRP-203ENST00000554074 IL27Q8NEV9 243 aa7.55□□□□□ -1.2
SLIRP-203ENST00000554074 ADAMTS19Q8TE59 1207 aa7.55□□□□□ -1.2
SLIRP-203ENST00000554074 CRYGNQ8WXF5 182 aa7.55□□□□□ -1.2
SLIRP-203ENST00000554074 GLG1Q92896 1179 aa7.55□□□□□ -1.2
SLIRP-203ENST00000554074 SDF4Q9BRK5 362 aa7.55□□□□□ -1.2
SLIRP-203ENST00000554074 ANO3Q9BYT9 981 aa7.55□□□□□ -1.2
SLIRP-203ENST00000554074 AGXT2Q9BYV1 514 aa7.55□□□□□ -1.2
SLIRP-203ENST00000554074 IFIH1Q9BYX4 1025 aaKnown RBP7.55□□□□□ -1.2
SLIRP-203ENST00000554074 FAM217BQ9NTX9 383 aaPredicted RBP7.55□□□□□ -1.2
SLIRP-203ENST00000554074 SLC9A2Q9UBY0 812 aa7.55□□□□□ -1.2
SLIRP-203ENST00000554074 TUBE1Q9UJT0 475 aa7.55□□□□□ -1.2
SLIRP-203ENST00000554074 SQORQ9Y6N5 450 aa7.55□□□□□ -1.2
SLIRP-203ENST00000554074 V9GY48 417 aaPredicted RBP7.55□□□□□ -1.2
SLIRP-203ENST00000554074 MUC3AQ02505 3323 aa7.55□□□□□ -1.2
SLIRP-203ENST00000554074 IGKV6D-21A0A0A0MT36 114 aa7.54□□□□□ -1.2
SLIRP-203ENST00000554074 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.54□□□□□ -1.2
SLIRP-203ENST00000554074 SMCO2A6NFE2 343 aa7.54□□□□□ -1.2
SLIRP-203ENST00000554074 REC8O95072 547 aa7.54□□□□□ -1.2
SLIRP-203ENST00000554074 ATG7O95352 703 aa7.54□□□□□ -1.2
SLIRP-203ENST00000554074 CYP3A4P08684 503 aa7.54□□□□□ -1.2
SLIRP-203ENST00000554074 CTSHP09668 335 aa7.54□□□□□ -1.2
SLIRP-203ENST00000554074 CDC27P30260 824 aa7.54□□□□□ -1.2
SLIRP-203ENST00000554074 METAP2P50579 478 aaKnown RBP eCLIP7.54□□□□□ -1.27e-8■□□□□ 9.9
SLIRP-203ENST00000554074 EVCP57679 992 aa7.54□□□□□ -1.2
SLIRP-203ENST00000554074 ACTR2P61160 394 aa7.54□□□□□ -1.2
SLIRP-203ENST00000554074 FGD1P98174 961 aa7.54□□□□□ -1.2
SLIRP-203ENST00000554074 SKIV2LQ15477 1246 aaKnown RBP7.54□□□□□ -1.2
SLIRP-203ENST00000554074 MARCH8Q5T0T0 291 aa7.54□□□□□ -1.2
SLIRP-203ENST00000554074 SPRED2Q7Z698 418 aa7.54□□□□□ -1.2
SLIRP-203ENST00000554074 SKAP1Q86WV1 359 aa7.54□□□□□ -1.2
SLIRP-203ENST00000554074 MICALL1Q8N3F8 863 aa7.54□□□□□ -1.2
SLIRP-203ENST00000554074 CCDC12Q8WUD4 166 aaPredicted RBP7.54□□□□□ -1.2
SLIRP-203ENST00000554074 HLA-CQ95604 372 aa7.54□□□□□ -1.2
SLIRP-203ENST00000554074 TCEANC2Q96MN5 208 aa7.54□□□□□ -1.2
SLIRP-203ENST00000554074 UHRF1Q96T88 793 aaPredicted RBP7.54□□□□□ -1.2
SLIRP-203ENST00000554074 PCYT2Q99447 389 aa7.54□□□□□ -1.2
SLIRP-203ENST00000554074 ZMYND12Q9H0C1 365 aa7.54□□□□□ -1.2
SLIRP-203ENST00000554074 AZI2Q9H6S1 392 aa7.54□□□□□ -1.2
SLIRP-203ENST00000554074 AGO4Q9HCK5 861 aaKnown RBP7.54□□□□□ -1.2
SLIRP-203ENST00000554074 KDM3AQ9Y4C1 1321 aa7.53□□□□□ -1.2
SLIRP-203ENST00000554074 PLXNA4Q9HCM2 1894 aa7.53□□□□□ -1.2
SLIRP-203ENST00000554074 PRPF3O43395 683 aaKnown RBP7.53□□□□□ -1.2
SLIRP-203ENST00000554074 RB1P06400 928 aa7.53□□□□□ -1.2
SLIRP-203ENST00000554074 ARP10275 920 aa7.53□□□□□ -1.2
SLIRP-203ENST00000554074 SCG2P13521 617 aa7.53□□□□□ -1.2
SLIRP-203ENST00000554074 INSRRP14616 1297 aa7.53□□□□□ -1.2
SLIRP-203ENST00000554074 MARK3P27448 753 aa7.53□□□□□ -1.2
SLIRP-203ENST00000554074 STAT5BP51692 787 aa7.53□□□□□ -1.2
SLIRP-203ENST00000554074 MRPS6P82932 125 aaKnown RBP7.53□□□□□ -1.2
SLIRP-203ENST00000554074 SETQ01105 290 aaPredicted RBP7.53□□□□□ -1.2
SLIRP-203ENST00000554074 ITGB3BPQ13352 177 aaPredicted RBP7.53□□□□□ -1.2
SLIRP-203ENST00000554074 LPIN1Q14693 890 aa7.53□□□□□ -1.2
SLIRP-203ENST00000554074 PLCB4Q15147 1175 aa7.53□□□□□ -1.2
SLIRP-203ENST00000554074 EPC2Q52LR7 807 aa7.53□□□□□ -1.2
SLIRP-203ENST00000554074 FBXO47Q5MNV8 452 aa7.53□□□□□ -1.2
SLIRP-203ENST00000554074 IER5Q5VY09 327 aa7.53□□□□□ -1.2
SLIRP-203ENST00000554074 KRT40Q6A162 431 aa7.53□□□□□ -1.2
SLIRP-203ENST00000554074 BLOC1S2Q6QNY1 142 aa7.53□□□□□ -1.2
SLIRP-203ENST00000554074 RUFY4Q6ZNE9 571 aa7.53□□□□□ -1.2
SLIRP-203ENST00000554074 TSHZ1Q6ZSZ6 1077 aa7.53□□□□□ -1.2
SLIRP-203ENST00000554074 Q6ZUG5 572 aa7.53□□□□□ -1.2
SLIRP-203ENST00000554074 NME8Q8N427 588 aa7.53□□□□□ -1.2
SLIRP-203ENST00000554074 FBXO22Q8NEZ5 403 aa7.53□□□□□ -1.2
SLIRP-203ENST00000554074 CYP2W1Q8TAV3 490 aa7.53□□□□□ -1.2
SLIRP-203ENST00000554074 GDPD5Q8WTR4 605 aa7.53□□□□□ -1.2
SLIRP-203ENST00000554074 MRPL38Q96DV4 380 aaKnown RBP7.53□□□□□ -1.2
SLIRP-203ENST00000554074 JAKMIP1Q96N16 626 aaKnown RBP7.53□□□□□ -1.2
SLIRP-203ENST00000554074 YME1L1Q96TA2 773 aa7.53□□□□□ -1.2
SLIRP-203ENST00000554074 FTHL17Q9BXU8 183 aa7.53□□□□□ -1.2
SLIRP-203ENST00000554074 OSBPL7Q9BZF2 842 aa7.53□□□□□ -1.2
SLIRP-203ENST00000554074 RC3H2Q9HBD1 1191 aaKnown RBP7.53□□□□□ -1.2
SLIRP-203ENST00000554074 PKD2L1Q9P0L9 805 aa7.53□□□□□ -1.2
SLIRP-203ENST00000554074 RWDD3Q9Y3V2 267 aa7.53□□□□□ -1.2
SLIRP-203ENST00000554074 PCDHA2Q9Y5H9 948 aa7.53□□□□□ -1.2
SLIRP-203ENST00000554074 SNX14Q9Y5W7 946 aa7.53□□□□□ -1.2
SLIRP-203ENST00000554074 COL1A2P08123 1366 aa7.53□□□□□ -1.2
SLIRP-203ENST00000554074 XIRP2A4UGR9 3374 aa7.52□□□□□ -1.21
SLIRP-203ENST00000554074 IGLV3-22A0A075B6J6 115 aa7.52□□□□□ -1.21
SLIRP-203ENST00000554074 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms