RNA–Protein interactions for RNA: ENST00000547825.5

LIMA1-203, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMA1, Length 3,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-203ENST00000547825 CASP8Q14790 479 aa6.06□□□□□ -1.44
LIMA1-203ENST00000547825 CATIPQ7Z7H3 387 aa6.06□□□□□ -1.44
LIMA1-203ENST00000547825 FBXO18Q8NFZ0 1043 aa6.06□□□□□ -1.44
LIMA1-203ENST00000547825 TBC1D31Q96DN5 1066 aa6.06□□□□□ -1.44
LIMA1-203ENST00000547825 SPACA7Q96KW9 195 aa6.06□□□□□ -1.44
LIMA1-203ENST00000547825 OSBPL2Q9H1P3 480 aa6.06□□□□□ -1.44
LIMA1-203ENST00000547825 ZNF408Q9H9D4 720 aa6.06□□□□□ -1.44
LIMA1-203ENST00000547825 KANSL3Q9P2N6 904 aa6.06□□□□□ -1.44
LIMA1-203ENST00000547825 TRMT112Q9UI30 125 aaKnown RBP6.06□□□□□ -1.44
LIMA1-203ENST00000547825 DBNLQ9UJU6 430 aaKnown RBP6.06□□□□□ -1.44
LIMA1-203ENST00000547825 CDC23Q9UJX2 597 aa6.06□□□□□ -1.44
LIMA1-203ENST00000547825 SAR1BQ9Y6B6 198 aa6.06□□□□□ -1.44
LIMA1-203ENST00000547825 SALL1Q9NSC2 1324 aa6.06□□□□□ -1.44
LIMA1-203ENST00000547825 PSMA7O14818 248 aa6.06□□□□□ -1.44
LIMA1-203ENST00000547825 SRGAP2O75044 1071 aa6.06□□□□□ -1.44
LIMA1-203ENST00000547825 IFT88Q13099 833 aa6.06□□□□□ -1.44
LIMA1-203ENST00000547825 SYCP1Q15431 976 aa6.06□□□□□ -1.44
LIMA1-203ENST00000547825 C8orf74Q6P047 294 aa6.06□□□□□ -1.44
LIMA1-203ENST00000547825 PRICKLE2Q7Z3G6 844 aa6.06□□□□□ -1.44
LIMA1-203ENST00000547825 CCDC25Q86WR0 208 aa6.06□□□□□ -1.44
LIMA1-203ENST00000547825 KBTBD3Q8NAB2 608 aa6.06□□□□□ -1.44
LIMA1-203ENST00000547825 MICAL1Q8TDZ2 1067 aa6.06□□□□□ -1.44
LIMA1-203ENST00000547825 RIN2Q8WYP3 895 aaPredicted RBP6.06□□□□□ -1.44
LIMA1-203ENST00000547825 DPF2Q92785 391 aa6.06□□□□□ -1.44
LIMA1-203ENST00000547825 JAKMIP2Q96AA8 810 aa6.06□□□□□ -1.44
LIMA1-203ENST00000547825 GPRASP2Q96D09 838 aa6.06□□□□□ -1.44
LIMA1-203ENST00000547825 LLPHQ9BRT6 129 aaKnown RBP6.06□□□□□ -1.44
LIMA1-203ENST00000547825 CWC25Q9NXE8 425 aaPredicted RBP6.06□□□□□ -1.44
LIMA1-203ENST00000547825 ADAMTS1Q9UHI8 967 aa6.06□□□□□ -1.44
LIMA1-203ENST00000547825 STX8Q9UNK0 236 aa6.06□□□□□ -1.44
LIMA1-203ENST00000547825 WASF2Q9Y6W5 498 aa6.06□□□□□ -1.44
LIMA1-203ENST00000547825 CCDC151A5D8V7 595 aa6.06□□□□□ -1.44
LIMA1-203ENST00000547825 POTECB2RU33 542 aa6.06□□□□□ -1.44
LIMA1-203ENST00000547825 VIMP08670 466 aaKnown RBP6.06□□□□□ -1.44
LIMA1-203ENST00000547825 CDC25AP30304 524 aa6.06□□□□□ -1.44
LIMA1-203ENST00000547825 MLKLQ8NB16 471 aa6.06□□□□□ -1.44
LIMA1-203ENST00000547825 UHMK1Q8TAS1 419 aaKnown RBP6.06□□□□□ -1.44
LIMA1-203ENST00000547825 EXOC4Q96A65 974 aa6.06□□□□□ -1.44
LIMA1-203ENST00000547825 GRIP2Q9C0E4 1043 aa6.06□□□□□ -1.44
LIMA1-203ENST00000547825 INCENPQ9NQS7 918 aa6.06□□□□□ -1.44
LIMA1-203ENST00000547825 FAM207AQ9NSI2 230 aaPredicted RBP6.06□□□□□ -1.44
LIMA1-203ENST00000547825 TTF2Q9UNY4 1162 aaKnown RBP6.06□□□□□ -1.44
LIMA1-203ENST00000547825 JAG2Q9Y219 1238 aa6.06□□□□□ -1.44
LIMA1-203ENST00000547825 MROH7-TTC4A0A0A0MT08 1334 aa6.06□□□□□ -1.44
LIMA1-203ENST00000547825 EIF4E1BA6NMX2 242 aaKnown RBP6.06□□□□□ -1.44
LIMA1-203ENST00000547825 NFKBIEO00221 500 aa6.06□□□□□ -1.44
LIMA1-203ENST00000547825 N4BP1O75113 896 aaKnown RBP6.06□□□□□ -1.44
LIMA1-203ENST00000547825 GGCXP38435 758 aa6.06□□□□□ -1.44
LIMA1-203ENST00000547825 SLC7A5Q01650 507 aa6.06□□□□□ -1.44
LIMA1-203ENST00000547825 SPAG1Q07617 926 aa6.06□□□□□ -1.44
LIMA1-203ENST00000547825 PPP2R5AQ15172 486 aa6.06□□□□□ -1.44
LIMA1-203ENST00000547825 CYP26C1Q6V0L0 522 aa6.06□□□□□ -1.44
LIMA1-203ENST00000547825 BTLAQ7Z6A9 289 aa6.06□□□□□ -1.44
LIMA1-203ENST00000547825 NLRP10Q86W26 655 aa6.06□□□□□ -1.44
LIMA1-203ENST00000547825 LINC00301Q8NCQ3 95 aa6.06□□□□□ -1.44
LIMA1-203ENST00000547825 PLBD2Q8NHP8 589 aa6.06□□□□□ -1.44
LIMA1-203ENST00000547825 FAM89AQ96GI7 184 aa6.06□□□□□ -1.44
LIMA1-203ENST00000547825 CCDC43Q96MW1 224 aaKnown RBP6.06□□□□□ -1.44
LIMA1-203ENST00000547825 SPAG5Q96R06 1193 aa6.06□□□□□ -1.44
LIMA1-203ENST00000547825 CAPS2Q9BXY5 557 aa6.06□□□□□ -1.44
LIMA1-203ENST00000547825 MKNK2Q9HBH9 465 aa6.06□□□□□ -1.44
LIMA1-203ENST00000547825 TCP11L1Q9NUJ3 509 aa6.06□□□□□ -1.44
LIMA1-203ENST00000547825 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.06□□□□□ -1.44
LIMA1-203ENST00000547825 FAM8A1Q9UBU6 413 aa6.06□□□□□ -1.44
LIMA1-203ENST00000547825 SLC4A4Q9Y6R1 1079 aa6.06□□□□□ -1.44
LIMA1-203ENST00000547825 PARP14Q460N5 1801 aa6.05□□□□□ -1.44
LIMA1-203ENST00000547825 SYNRGQ9UMZ2 1314 aa6.05□□□□□ -1.44
LIMA1-203ENST00000547825 POLR2AP24928 1970 aaKnown RBP6.05□□□□□ -1.44
LIMA1-203ENST00000547825 ATAD5Q96QE3 1844 aa6.05□□□□□ -1.44
LIMA1-203ENST00000547825 GPAA1O43292 621 aa6.05□□□□□ -1.44
LIMA1-203ENST00000547825 PFKFB2O60825 505 aa6.05□□□□□ -1.44
LIMA1-203ENST00000547825 TFRCP02786 760 aaKnown RBP6.05□□□□□ -1.44
LIMA1-203ENST00000547825 SERPINB2P05120 415 aa6.05□□□□□ -1.44
LIMA1-203ENST00000547825 DPEP1P16444 411 aa6.05□□□□□ -1.44
LIMA1-203ENST00000547825 CMA1P23946 247 aa6.05□□□□□ -1.44
LIMA1-203ENST00000547825 ETFBP38117 255 aa6.05□□□□□ -1.44
LIMA1-203ENST00000547825 MAP3K10Q02779 954 aa6.05□□□□□ -1.44
LIMA1-203ENST00000547825 POU4F2Q12837 409 aa6.05□□□□□ -1.44
LIMA1-203ENST00000547825 SUSD4Q5VX71 490 aa6.05□□□□□ -1.44
LIMA1-203ENST00000547825 ATL3Q6DD88 541 aa6.05□□□□□ -1.44
LIMA1-203ENST00000547825 SLC51AQ86UW1 340 aa6.05□□□□□ -1.44
LIMA1-203ENST00000547825 SNX29Q8TEQ0 813 aa6.05□□□□□ -1.44
LIMA1-203ENST00000547825 EXOC1Q9NV70 894 aa6.05□□□□□ -1.44
LIMA1-203ENST00000547825 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.05□□□□□ -1.44
LIMA1-203ENST00000547825 ANGEL1Q9UNK9 670 aaKnown RBP6.05□□□□□ -1.44
LIMA1-203ENST00000547825 LOC285556D6RIA3 1793 aa6.05□□□□□ -1.44
LIMA1-203ENST00000547825 STX10O60499 249 aa6.05□□□□□ -1.44
LIMA1-203ENST00000547825 BUB1BO60566 1050 aaPredicted RBP6.05□□□□□ -1.44
LIMA1-203ENST00000547825 STK10O94804 968 aaKnown RBP6.05□□□□□ -1.44
LIMA1-203ENST00000547825 HSPD1P10809 573 aaKnown RBP6.05□□□□□ -1.44
LIMA1-203ENST00000547825 CYP27A1Q02318 531 aa6.05□□□□□ -1.44
LIMA1-203ENST00000547825 CEP85LQ5SZL2 805 aa6.05□□□□□ -1.44
LIMA1-203ENST00000547825 C1orf53Q5VUE5 145 aa6.05□□□□□ -1.44
LIMA1-203ENST00000547825 B4GALNT4Q76KP1 1039 aa6.05□□□□□ -1.44
LIMA1-203ENST00000547825 TMTC1Q8IUR5 882 aa6.05□□□□□ -1.44
LIMA1-203ENST00000547825 IQUBQ8NA54 791 aa6.05□□□□□ -1.44
LIMA1-203ENST00000547825 NLRC4Q9NPP4 1024 aa6.05□□□□□ -1.44
LIMA1-203ENST00000547825 VPS54Q9P1Q0 977 aa6.05□□□□□ -1.44
LIMA1-203ENST00000547825 TLR6Q9Y2C9 796 aa6.05□□□□□ -1.44
LIMA1-203ENST00000547825 PTPRFP10586 1907 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 151.6 ms