RNA–Protein interactions for RNA: ENST00000544327.1

SCARB1-208, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 1,812 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-208ENST00000544327 GAP43P17677 238 aa19.51■□□□□ 0.71
SCARB1-208ENST00000544327 TCP1P17987 556 aaKnown RBP19.51■□□□□ 0.71
SCARB1-208ENST00000544327 MUTP22033 750 aa19.51■□□□□ 0.71
SCARB1-208ENST00000544327 HOXA13P31271 388 aaPredicted RBP19.51■□□□□ 0.71
SCARB1-208ENST00000544327 RAD51AP2Q09MP3 1159 aa19.51■□□□□ 0.71
SCARB1-208ENST00000544327 KCNH2Q12809 1159 aa19.51■□□□□ 0.71
SCARB1-208ENST00000544327 MAP9Q49MG5 647 aa19.51■□□□□ 0.71
SCARB1-208ENST00000544327 DPY19L2P1Q6NXN4 242 aa19.51■□□□□ 0.71
SCARB1-208ENST00000544327 RSBN1LQ6PCB5 846 aaPredicted RBP19.51■□□□□ 0.71
SCARB1-208ENST00000544327 CAPZA3Q96KX2 299 aa19.51■□□□□ 0.71
SCARB1-208ENST00000544327 RANBP17Q9H2T7 1088 aaKnown RBP19.51■□□□□ 0.71
SCARB1-208ENST00000544327 VIPAS39Q9H9C1 493 aa19.51■□□□□ 0.71
SCARB1-208ENST00000544327 LUC7LQ9NQ29 371 aaKnown RBP19.51■□□□□ 0.71
SCARB1-208ENST00000544327 JADE2Q9NQC1 790 aa19.51■□□□□ 0.71
SCARB1-208ENST00000544327 TYW1Q9NV66 732 aaKnown RBP19.51■□□□□ 0.71
SCARB1-208ENST00000544327 H3BQF6 201 aa19.51■□□□□ 0.71
SCARB1-208ENST00000544327 ZNF76P36508 570 aa19.51■□□□□ 0.71
SCARB1-208ENST00000544327 POLR2FP61218 127 aaKnown RBP19.51■□□□□ 0.71
SCARB1-208ENST00000544327 GFPT1Q06210 699 aaPredicted RBP19.51■□□□□ 0.71
SCARB1-208ENST00000544327 PPP2R5CQ13362 524 aa19.51■□□□□ 0.71
SCARB1-208ENST00000544327 CASP8Q14790 479 aa19.51■□□□□ 0.71
SCARB1-208ENST00000544327 SLC15A2Q16348 729 aa19.51■□□□□ 0.71
SCARB1-208ENST00000544327 CAGE1Q8TC20 777 aa19.51■□□□□ 0.71
SCARB1-208ENST00000544327 GMLQ99445 158 aa19.51■□□□□ 0.71
SCARB1-208ENST00000544327 HSD17B14Q9BPX1 270 aa19.51■□□□□ 0.71
SCARB1-208ENST00000544327 NLRC4Q9NPP4 1024 aa19.51■□□□□ 0.71
SCARB1-208ENST00000544327 OLFML3Q9NRN5 406 aa19.51■□□□□ 0.71
SCARB1-208ENST00000544327 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.51■□□□□ 0.71
SCARB1-208ENST00000544327 TSKSQ9UJT2 592 aa19.51■□□□□ 0.71
SCARB1-208ENST00000544327 HDAC9Q9UKV0 1011 aa19.51■□□□□ 0.71
SCARB1-208ENST00000544327 RABGAP1Q9Y3P9 1069 aa19.51■□□□□ 0.71
SCARB1-208ENST00000544327 HYOU1Q9Y4L1 999 aa19.51■□□□□ 0.71
SCARB1-208ENST00000544327 EML1O00423 815 aa19.5■□□□□ 0.71
SCARB1-208ENST00000544327 ZNF185O15231 689 aa19.5■□□□□ 0.71
SCARB1-208ENST00000544327 POLR3GO15318 223 aaPredicted RBP19.5■□□□□ 0.71
SCARB1-208ENST00000544327 TAL1P17542 331 aaPredicted RBP19.5■□□□□ 0.71
SCARB1-208ENST00000544327 ERCC3P19447 782 aa19.5■□□□□ 0.71
SCARB1-208ENST00000544327 ECE1P42892 770 aa19.5■□□□□ 0.71
SCARB1-208ENST00000544327 NFIL3Q16649 462 aa19.5■□□□□ 0.71
SCARB1-208ENST00000544327 KIAA1755Q5JYT7 1200 aa19.5■□□□□ 0.71
SCARB1-208ENST00000544327 SLC5A5Q92911 643 aa19.5■□□□□ 0.71
SCARB1-208ENST00000544327 NOX5Q96PH1 765 aa19.5■□□□□ 0.71
SCARB1-208ENST00000544327 ZHX3Q9H4I2 956 aa19.5■□□□□ 0.71
SCARB1-208ENST00000544327 METTL14Q9HCE5 456 aaKnown RBP19.5■□□□□ 0.71
SCARB1-208ENST00000544327 ZNF70Q9UC06 446 aaPredicted RBP19.5■□□□□ 0.71
SCARB1-208ENST00000544327 ARMCX3Q9UH62 379 aaPredicted RBP19.5■□□□□ 0.71
SCARB1-208ENST00000544327 ZHX1Q9UKY1 873 aaPredicted RBP19.5■□□□□ 0.71
SCARB1-208ENST00000544327 CNTNAP1P78357 1384 aa19.49■□□□□ 0.71
SCARB1-208ENST00000544327 EIF3DO15371 548 aaKnown RBP eCLIP19.49■□□□□ 0.71
SCARB1-208ENST00000544327 TBC1D12O60347 775 aa19.49■□□□□ 0.71
SCARB1-208ENST00000544327 PSMD10O75832 226 aa19.49■□□□□ 0.71
SCARB1-208ENST00000544327 SLC18A3Q16572 532 aa19.49■□□□□ 0.71
SCARB1-208ENST00000544327 TDRD12Q587J7 1177 aaKnown RBP19.49■□□□□ 0.71
SCARB1-208ENST00000544327 FKBP1CQ5VVH2 108 aa19.49■□□□□ 0.71
SCARB1-208ENST00000544327 OTOP1Q7RTM1 612 aa19.49■□□□□ 0.71
SCARB1-208ENST00000544327 SPICE1Q8N0Z3 855 aa19.49■□□□□ 0.71
SCARB1-208ENST00000544327 CYP2W1Q8TAV3 490 aa19.49■□□□□ 0.71
SCARB1-208ENST00000544327 CHURC1Q8WUH1 139 aa19.49■□□□□ 0.71
SCARB1-208ENST00000544327 OSBPL9Q96SU4 736 aa19.49■□□□□ 0.71
SCARB1-208ENST00000544327 WDR18Q9BV38 432 aa19.49■□□□□ 0.71
SCARB1-208ENST00000544327 RUSC1Q9BVN2 902 aa19.49■□□□□ 0.71
SCARB1-208ENST00000544327 BHMT2Q9H2M3 363 aa19.49■□□□□ 0.71
SCARB1-208ENST00000544327 EHMT1Q9H9B1 1298 aa19.49■□□□□ 0.71
SCARB1-208ENST00000544327 FBXL5Q9UKA1 691 aa19.49■□□□□ 0.71
SCARB1-208ENST00000544327 ZBTB21Q9ULJ3 1066 aa19.49■□□□□ 0.71
SCARB1-208ENST00000544327 GCOM1H8Y6P7 765 aaPredicted RBP19.48■□□□□ 0.71
SCARB1-208ENST00000544327 TBCAO75347 108 aaKnown RBP19.48■□□□□ 0.71
SCARB1-208ENST00000544327 AFPP02771 609 aaKnown RBP19.48■□□□□ 0.71
SCARB1-208ENST00000544327 VIL1P09327 827 aaKnown RBP19.48■□□□□ 0.71
SCARB1-208ENST00000544327 POLR2MP0CAP2 368 aa19.48■□□□□ 0.71
SCARB1-208ENST00000544327 MYBP10242 640 aa19.48■□□□□ 0.71
SCARB1-208ENST00000544327 RPL13P26373 211 aaKnown RBP19.48■□□□□ 0.71
SCARB1-208ENST00000544327 EPS15P42566 896 aa19.48■□□□□ 0.71
SCARB1-208ENST00000544327 RINT1Q6NUQ1 792 aa19.48■□□□□ 0.71
SCARB1-208ENST00000544327 ACER1Q8TDN7 264 aa19.48■□□□□ 0.71
SCARB1-208ENST00000544327 DEFB129Q9H1M3 183 aa19.48■□□□□ 0.71
SCARB1-208ENST00000544327 ACBD3Q9H3P7 528 aa19.48■□□□□ 0.71
SCARB1-208ENST00000544327 PDE11AQ9HCR9 933 aa19.48■□□□□ 0.71
SCARB1-208ENST00000544327 PSD3Q9NYI0 1048 aa19.48■□□□□ 0.71
SCARB1-208ENST00000544327 SALL4Q9UJQ4 1053 aa19.48■□□□□ 0.71
SCARB1-208ENST00000544327 MRPL11Q9Y3B7 192 aaKnown RBP19.48■□□□□ 0.71
SCARB1-208ENST00000544327 ASTN1O14525 1302 aa19.48■□□□□ 0.71
SCARB1-208ENST00000544327 ATP8B3O60423 1300 aa19.48■□□□□ 0.71
SCARB1-208ENST00000544327 TCP10L2B9ZVM9 353 aa19.48■□□□□ 0.71
SCARB1-208ENST00000544327 RASSF7Q02833 373 aa19.48■□□□□ 0.71
SCARB1-208ENST00000544327 ASIC2Q16515 512 aa19.48■□□□□ 0.71
SCARB1-208ENST00000544327 SPDYE2Q495Y8 402 aa19.48■□□□□ 0.71
SCARB1-208ENST00000544327 FAM160B2Q86V87 743 aa19.48■□□□□ 0.71
SCARB1-208ENST00000544327 PSMD1Q99460 953 aa19.48■□□□□ 0.71
SCARB1-208ENST00000544327 SUGCTQ9HAC7 445 aa19.48■□□□□ 0.71
SCARB1-208ENST00000544327 UBE4BO95155 1302 aa19.48■□□□□ 0.71
SCARB1-208ENST00000544327 BTNL10A8MVZ5 291 aa19.47■□□□□ 0.71
SCARB1-208ENST00000544327 PRPF6O94906 941 aaKnown RBP19.47■□□□□ 0.71
SCARB1-208ENST00000544327 NR3C1P04150 777 aa19.47■□□□□ 0.71
SCARB1-208ENST00000544327 ANXA13P27216 316 aa19.47■□□□□ 0.71
SCARB1-208ENST00000544327 CYP4A11Q02928 519 aa19.47■□□□□ 0.71
SCARB1-208ENST00000544327 NAB2Q15742 525 aa19.47■□□□□ 0.71
SCARB1-208ENST00000544327 C10orf76Q5T2E6 689 aa19.47■□□□□ 0.71
SCARB1-208ENST00000544327 KLHDC7AQ5VTJ3 777 aa19.47■□□□□ 0.71
SCARB1-208ENST00000544327 CCDC70Q6NSX1 233 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 377.7 ms