RNA–Protein interactions for RNA: ENST00000532149.1

CHD7-211, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-211ENST00000532149 TMEM174Q8WUU8 243 aa13.61□□□□□ -0.23
CHD7-211ENST00000532149 GPRASP2Q96D09 838 aa13.61□□□□□ -0.23
CHD7-211ENST00000532149 IWS1Q96ST2 819 aa13.61□□□□□ -0.23
CHD7-211ENST00000532149 MPHOSPH6Q99547 160 aaKnown RBP13.61□□□□□ -0.23
CHD7-211ENST00000532149 NOC4LQ9BVI4 516 aaKnown RBP13.61□□□□□ -0.23
CHD7-211ENST00000532149 TEX13BQ9BXU2 312 aa13.61□□□□□ -0.23
CHD7-211ENST00000532149 KRTAP3-3Q9BYR6 98 aa13.61□□□□□ -0.23
CHD7-211ENST00000532149 KRTAP3-2Q9BYR7 98 aa13.61□□□□□ -0.23
CHD7-211ENST00000532149 ZSWIM4Q9H7M6 989 aa13.61□□□□□ -0.23
CHD7-211ENST00000532149 METTL14Q9HCE5 456 aaKnown RBP13.61□□□□□ -0.23
CHD7-211ENST00000532149 MYO1AQ9UBC5 1043 aa13.61□□□□□ -0.23
CHD7-211ENST00000532149 DBR1Q9UK59 544 aaKnown RBP13.61□□□□□ -0.23
CHD7-211ENST00000532149 CAPN11Q9UMQ6 739 aa13.61□□□□□ -0.23
CHD7-211ENST00000532149 TRAF3IP3Q9Y228 551 aa13.61□□□□□ -0.23
CHD7-211ENST00000532149 CSADQ9Y600 493 aa13.61□□□□□ -0.23
CHD7-211ENST00000532149 ZNF541Q9H0D2 1346 aa13.61□□□□□ -0.23
CHD7-211ENST00000532149 LOC102724159A0A0B4J2E5 919 aa13.6□□□□□ -0.23
CHD7-211ENST00000532149 POTECB2RU33 542 aa13.6□□□□□ -0.23
CHD7-211ENST00000532149 CETN3O15182 167 aa13.6□□□□□ -0.23
CHD7-211ENST00000532149 MED24O75448 989 aa13.6□□□□□ -0.23
CHD7-211ENST00000532149 SBF1O95248 1867 aa13.6□□□□□ -0.23
CHD7-211ENST00000532149 ALAS1P13196 640 aa13.6□□□□□ -0.23
CHD7-211ENST00000532149 GUCY2CP25092 1073 aa13.6□□□□□ -0.23
CHD7-211ENST00000532149 CCND2P30279 289 aa13.6□□□□□ -0.23
CHD7-211ENST00000532149 ZBED6P86452 979 aa13.6□□□□□ -0.23
CHD7-211ENST00000532149 PABPC4Q13310 644 aaKnown RBP eCLIP13.6□□□□□ -0.23
CHD7-211ENST00000532149 PWP2Q15269 919 aaKnown RBP13.6□□□□□ -0.23
CHD7-211ENST00000532149 RNF207Q6ZRF8 634 aa13.6□□□□□ -0.23
CHD7-211ENST00000532149 DYMQ7RTS9 669 aa13.6□□□□□ -0.23
CHD7-211ENST00000532149 ZC3H3Q8IXZ2 948 aaKnown RBP13.6□□□□□ -0.23
CHD7-211ENST00000532149 CCDC170Q8IYT3 715 aa13.6□□□□□ -0.23
CHD7-211ENST00000532149 PROCA1Q8NCQ7 364 aaPredicted RBP13.6□□□□□ -0.23
CHD7-211ENST00000532149 DNERQ8NFT8 737 aa13.6□□□□□ -0.23
CHD7-211ENST00000532149 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.6□□□□□ -0.23
CHD7-211ENST00000532149 SYTL5Q8TDW5 730 aaPredicted RBP13.6□□□□□ -0.23
CHD7-211ENST00000532149 NSUN6Q8TEA1 469 aaKnown RBP13.6□□□□□ -0.23
CHD7-211ENST00000532149 CNOT6LQ96LI5 555 aaKnown RBP13.6□□□□□ -0.23
CHD7-211ENST00000532149 TRERF1Q96PN7 1200 aa13.6□□□□□ -0.23
CHD7-211ENST00000532149 SENP7Q9BQF6 1050 aa13.6□□□□□ -0.23
CHD7-211ENST00000532149 NUDT12Q9BQG2 462 aa13.6□□□□□ -0.23
CHD7-211ENST00000532149 VPS16Q9H269 839 aa13.6□□□□□ -0.23
CHD7-211ENST00000532149 SLC39A2Q9NP94 309 aa13.6□□□□□ -0.23
CHD7-211ENST00000532149 GGA3Q9NZ52 723 aa13.6□□□□□ -0.23
CHD7-211ENST00000532149 ZHX2Q9Y6X8 837 aa13.6□□□□□ -0.23
CHD7-211ENST00000532149 PHLPP2Q6ZVD8 1323 aa13.6□□□□□ -0.23
CHD7-211ENST00000532149 CXCL11O14625 94 aa13.59□□□□□ -0.23
CHD7-211ENST00000532149 SLITRK3O94933 977 aa13.59□□□□□ -0.23
CHD7-211ENST00000532149 IPO7O95373 1038 aaKnown RBP13.59□□□□□ -0.23
CHD7-211ENST00000532149 SSBP05455 408 aaKnown RBP eCLIP13.59□□□□□ -0.23
CHD7-211ENST00000532149 SNAP25P60880 206 aa13.59□□□□□ -0.23
CHD7-211ENST00000532149 ETF1P62495 437 aaKnown RBP13.59□□□□□ -0.23
CHD7-211ENST00000532149 PPATQ06203 517 aa13.59□□□□□ -0.23
CHD7-211ENST00000532149 RBL2Q08999 1139 aa13.59□□□□□ -0.23
CHD7-211ENST00000532149 GIT2Q14161 759 aa13.59□□□□□ -0.23
CHD7-211ENST00000532149 GNPTABQ3T906 1256 aa13.59□□□□□ -0.23
CHD7-211ENST00000532149 VWA3BQ502W6 1294 aa13.59□□□□□ -0.23
CHD7-211ENST00000532149 ZCWPW2Q504Y3 356 aa13.59□□□□□ -0.23
CHD7-211ENST00000532149 E4F1Q66K89 784 aaPredicted RBP13.59□□□□□ -0.23
CHD7-211ENST00000532149 ZNF662Q6ZS27 426 aa13.59□□□□□ -0.23
CHD7-211ENST00000532149 FRMD5Q7Z6J6 570 aa13.59□□□□□ -0.23
CHD7-211ENST00000532149 SMAP1Q8IYB5 467 aaPredicted RBP13.59□□□□□ -0.23
CHD7-211ENST00000532149 LRRC15Q8TF66 581 aa13.59□□□□□ -0.23
CHD7-211ENST00000532149 GTF3C2Q8WUA4 911 aaPredicted RBP13.59□□□□□ -0.23
CHD7-211ENST00000532149 AGBL1Q96MI9 1066 aa13.59□□□□□ -0.23
CHD7-211ENST00000532149 P2RX7Q99572 595 aaKnown RBP13.59□□□□□ -0.23
CHD7-211ENST00000532149 SEMA6BQ9H3T3 888 aa13.59□□□□□ -0.23
CHD7-211ENST00000532149 FBXO28Q9NVF7 368 aa13.59□□□□□ -0.23
CHD7-211ENST00000532149 AFG3L2Q9Y4W6 797 aa13.59□□□□□ -0.23
CHD7-211ENST00000532149 PCDHA2Q9Y5H9 948 aa13.59□□□□□ -0.23
CHD7-211ENST00000532149 E9PMD0 336 aa13.58□□□□□ -0.24
CHD7-211ENST00000532149 SLC16A3O15427 465 aaKnown RBP13.58□□□□□ -0.24
CHD7-211ENST00000532149 TEX33O43247 280 aa13.58□□□□□ -0.24
CHD7-211ENST00000532149 EGFRP00533 1210 aa13.58□□□□□ -0.24
CHD7-211ENST00000532149 FCER1AP12319 257 aa13.58□□□□□ -0.24
CHD7-211ENST00000532149 RPS6P62753 249 aaKnown RBP13.58□□□□□ -0.24
CHD7-211ENST00000532149 KRT83P78385 493 aa13.58□□□□□ -0.24
CHD7-211ENST00000532149 MTMR1Q13613 665 aa13.58□□□□□ -0.24
CHD7-211ENST00000532149 ECM1Q16610 540 aa13.58□□□□□ -0.24
CHD7-211ENST00000532149 KNOP1Q1ED39 458 aaKnown RBP13.58□□□□□ -0.24
CHD7-211ENST00000532149 ZNF746Q6NUN9 644 aaPredicted RBP13.58□□□□□ -0.24
CHD7-211ENST00000532149 LBX2Q6XYB7 198 aa13.58□□□□□ -0.24
CHD7-211ENST00000532149 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.58□□□□□ -0.24
CHD7-211ENST00000532149 KCNK18Q7Z418 384 aa13.58□□□□□ -0.24
CHD7-211ENST00000532149 TMEM139Q8IV31 216 aa13.58□□□□□ -0.24
CHD7-211ENST00000532149 NLGN2Q8NFZ4 835 aa13.58□□□□□ -0.24
CHD7-211ENST00000532149 PPP1R13BQ96KQ4 1090 aa13.58□□□□□ -0.24
CHD7-211ENST00000532149 MAP7D2Q96T17 732 aa13.58□□□□□ -0.24
CHD7-211ENST00000532149 RMDN3Q96TC7 470 aa13.58□□□□□ -0.24
CHD7-211ENST00000532149 DNAJC7Q99615 494 aa13.58□□□□□ -0.24
CHD7-211ENST00000532149 MKNK1Q9BUB5 465 aa13.58□□□□□ -0.24
CHD7-211ENST00000532149 GLIS2Q9BZE0 524 aaPredicted RBP13.58□□□□□ -0.24
CHD7-211ENST00000532149 NDST4Q9H3R1 872 aa13.58□□□□□ -0.24
CHD7-211ENST00000532149 ACAD9Q9H845 621 aa13.58□□□□□ -0.24
CHD7-211ENST00000532149 C17orf75Q9HAS0 396 aa13.58□□□□□ -0.24
CHD7-211ENST00000532149 PARVGQ9HBI0 331 aa13.58□□□□□ -0.24
CHD7-211ENST00000532149 KCNH7Q9NS40 1196 aa13.58□□□□□ -0.24
CHD7-211ENST00000532149 ANKEF1Q9NU02 776 aa13.58□□□□□ -0.24
CHD7-211ENST00000532149 TYW1Q9NV66 732 aaKnown RBP13.58□□□□□ -0.24
CHD7-211ENST00000532149 TAB2Q9NYJ8 693 aa13.58□□□□□ -0.24
CHD7-211ENST00000532149 MAPK8IP1Q9UQF2 711 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms