RNA–Protein interactions for RNA: ENST00000513819.1

NIPBL-207, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 452 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-207ENST00000513819 NR1I3Q14994 352 aa5.87□□□□□ -1.47
NIPBL-207ENST00000513819 CATSPEREQ5SY80 951 aa5.87□□□□□ -1.47
NIPBL-207ENST00000513819 TRIM48Q8IWZ4 208 aa5.87□□□□□ -1.47
NIPBL-207ENST00000513819 CBARPQ8N350 705 aaPredicted RBP5.87□□□□□ -1.47
NIPBL-207ENST00000513819 RTF1Q92541 710 aaKnown RBP5.87□□□□□ -1.47
NIPBL-207ENST00000513819 TOPORSQ9NS56 1045 aaPredicted RBP5.87□□□□□ -1.47
NIPBL-207ENST00000513819 KLHL14Q9P2G3 628 aa5.87□□□□□ -1.47
NIPBL-207ENST00000513819 NOC2LQ9Y3T9 749 aaKnown RBP5.87□□□□□ -1.47
NIPBL-207ENST00000513819 TNKSO95271 1327 aa5.87□□□□□ -1.47
NIPBL-207ENST00000513819 KRTAP9-6A0A140TA67 174 aa5.86□□□□□ -1.47
NIPBL-207ENST00000513819 K7ESF4 209 aa5.86□□□□□ -1.47
NIPBL-207ENST00000513819 FOXP2O15409 715 aa5.86□□□□□ -1.47
NIPBL-207ENST00000513819 FBXO21O94952 628 aa5.86□□□□□ -1.47
NIPBL-207ENST00000513819 ZBTB7AO95365 584 aa5.86□□□□□ -1.47
NIPBL-207ENST00000513819 MT-CO1P00395 513 aa5.86□□□□□ -1.47
NIPBL-207ENST00000513819 CYP17A1P05093 508 aa5.86□□□□□ -1.47
NIPBL-207ENST00000513819 MMEP08473 750 aa5.86□□□□□ -1.47
NIPBL-207ENST00000513819 TMEM253P0C7T8 217 aa5.86□□□□□ -1.47
NIPBL-207ENST00000513819 MYBL2P10244 700 aa5.86□□□□□ -1.47
NIPBL-207ENST00000513819 SDHAP31040 664 aa5.86□□□□□ -1.47
NIPBL-207ENST00000513819 EPHB1P54762 984 aa5.86□□□□□ -1.47
NIPBL-207ENST00000513819 SCAND1P57086 179 aa5.86□□□□□ -1.47
NIPBL-207ENST00000513819 PHC1P78364 1004 aa5.86□□□□□ -1.47
NIPBL-207ENST00000513819 PLEKHN1Q494U1 663 aaPredicted RBP5.86□□□□□ -1.47
NIPBL-207ENST00000513819 PAN2Q504Q3 1202 aaKnown RBP5.86□□□□□ -1.47
NIPBL-207ENST00000513819 RASSF3Q86WH2 238 aa5.86□□□□□ -1.47
NIPBL-207ENST00000513819 FMNL3Q8IVF7 1028 aa5.86□□□□□ -1.47
NIPBL-207ENST00000513819 ZNF610Q8N9Z0 462 aa5.86□□□□□ -1.47
NIPBL-207ENST00000513819 MENTQ9BUN1 341 aa5.86□□□□□ -1.47
NIPBL-207ENST00000513819 SLC6A17Q9H1V8 727 aa5.86□□□□□ -1.47
NIPBL-207ENST00000513819 PLA2G2DQ9UNK4 145 aa5.86□□□□□ -1.47
NIPBL-207ENST00000513819 OAS3Q9Y6K5 1087 aaKnown RBP5.86□□□□□ -1.47
NIPBL-207ENST00000513819 OR14I1A6ND48 311 aa5.85□□□□□ -1.47
NIPBL-207ENST00000513819 FAHP16930 419 aa5.85□□□□□ -1.47
NIPBL-207ENST00000513819 CD40P25942 277 aa5.85□□□□□ -1.47
NIPBL-207ENST00000513819 MAPKAPK2P49137 400 aa5.85□□□□□ -1.47
NIPBL-207ENST00000513819 RAB27AP51159 221 aa5.85□□□□□ -1.47
NIPBL-207ENST00000513819 FAPQ12884 760 aa5.85□□□□□ -1.47
NIPBL-207ENST00000513819 KLF1Q13351 362 aaPredicted RBP5.85□□□□□ -1.47
NIPBL-207ENST00000513819 SLC9A5Q14940 896 aa5.85□□□□□ -1.47
NIPBL-207ENST00000513819 PDCD1Q15116 288 aa5.85□□□□□ -1.47
NIPBL-207ENST00000513819 LRRC41Q15345 812 aa5.85□□□□□ -1.47
NIPBL-207ENST00000513819 PTPN21Q16825 1174 aa5.85□□□□□ -1.47
NIPBL-207ENST00000513819 INAVAQ3KP66 663 aa5.85□□□□□ -1.47
NIPBL-207ENST00000513819 ARTNQ5T4W7 220 aa5.85□□□□□ -1.47
NIPBL-207ENST00000513819 GPR158Q5T848 1215 aa5.85□□□□□ -1.47
NIPBL-207ENST00000513819 CBLL1Q75N03 491 aa5.85□□□□□ -1.47
NIPBL-207ENST00000513819 ATG4DQ86TL0 474 aaPredicted RBP5.85□□□□□ -1.47
NIPBL-207ENST00000513819 ZBTB46Q86UZ6 589 aa5.85□□□□□ -1.47
NIPBL-207ENST00000513819 Q8N3U1 123 aa5.85□□□□□ -1.47
NIPBL-207ENST00000513819 TTLL11Q8NHH1 800 aa5.85□□□□□ -1.47
NIPBL-207ENST00000513819 ERCC4Q92889 916 aaPredicted RBP5.85□□□□□ -1.47
NIPBL-207ENST00000513819 TSR2Q969E8 191 aaKnown RBP5.85□□□□□ -1.47
NIPBL-207ENST00000513819 HOOK2Q96ED9 719 aa5.85□□□□□ -1.47
NIPBL-207ENST00000513819 TSPAN17Q96FV3 270 aa5.85□□□□□ -1.47
NIPBL-207ENST00000513819 C16orf92Q96LL3 132 aa5.85□□□□□ -1.47
NIPBL-207ENST00000513819 ZDHHC5Q9C0B5 715 aa5.85□□□□□ -1.47
NIPBL-207ENST00000513819 PDGFDQ9GZP0 370 aaPredicted RBP5.85□□□□□ -1.47
NIPBL-207ENST00000513819 AASDHPPTQ9NRN7 309 aa5.85□□□□□ -1.47
NIPBL-207ENST00000513819 TCEAL9Q9UHQ7 104 aa5.85□□□□□ -1.47
NIPBL-207ENST00000513819 MSRAQ9UJ68 235 aa5.85□□□□□ -1.47
NIPBL-207ENST00000513819 WASHC2AQ641Q2 1341 aa5.84□□□□□ -1.47
NIPBL-207ENST00000513819 SHTN1A0MZ66 631 aa5.84□□□□□ -1.47
NIPBL-207ENST00000513819 GOLGA8AA7E2F4 631 aa5.84□□□□□ -1.47
NIPBL-207ENST00000513819 GOLGA8BA8MQT2 603 aa5.84□□□□□ -1.47
NIPBL-207ENST00000513819 KDM1AO60341 852 aa5.84□□□□□ -1.47
NIPBL-207ENST00000513819 STAT5AP42229 794 aa5.84□□□□□ -1.47
NIPBL-207ENST00000513819 FNTBP49356 437 aa5.84□□□□□ -1.47
NIPBL-207ENST00000513819 LRRC32Q14392 662 aa5.84□□□□□ -1.47
NIPBL-207ENST00000513819 KCNMB1Q16558 191 aa5.84□□□□□ -1.47
NIPBL-207ENST00000513819 NFE2Q16621 373 aaPredicted RBP5.84□□□□□ -1.47
NIPBL-207ENST00000513819 ZC3H14Q6PJT7 736 aaKnown RBP5.84□□□□□ -1.47
NIPBL-207ENST00000513819 ZZZ3Q8IYH5 903 aa5.84□□□□□ -1.47
NIPBL-207ENST00000513819 ASB15Q8WXK1 588 aa5.84□□□□□ -1.47
NIPBL-207ENST00000513819 ALG3Q92685 438 aa5.84□□□□□ -1.47
NIPBL-207ENST00000513819 CHMP4CQ96CF2 233 aa5.84□□□□□ -1.47
NIPBL-207ENST00000513819 FUBP3Q96I24 572 aaKnown RBP eCLIP5.84□□□□□ -1.47
NIPBL-207ENST00000513819 ZNF496Q96IT1 587 aaPredicted RBP5.84□□□□□ -1.47
NIPBL-207ENST00000513819 GBP4Q96PP9 640 aa5.84□□□□□ -1.47
NIPBL-207ENST00000513819 SEMA4AQ9H3S1 761 aa5.84□□□□□ -1.47
NIPBL-207ENST00000513819 DTLQ9NZJ0 730 aa5.84□□□□□ -1.47
NIPBL-207ENST00000513819 PRAMEF22A3QJZ6 481 aa5.83□□□□□ -1.48
NIPBL-207ENST00000513819 AKAP10O43572 662 aa5.83□□□□□ -1.48
NIPBL-207ENST00000513819 H2AFYO75367 372 aaKnown RBP5.83□□□□□ -1.48
NIPBL-207ENST00000513819 LRG1P02750 347 aa5.83□□□□□ -1.48
NIPBL-207ENST00000513819 GLI1P08151 1106 aa5.83□□□□□ -1.48
NIPBL-207ENST00000513819 PCBP2Q15366 365 aaKnown RBP eCLIP5.83□□□□□ -1.48
NIPBL-207ENST00000513819 EPHA7Q15375 998 aa5.83□□□□□ -1.48
NIPBL-207ENST00000513819 PRAMEF18Q5VWM3 479 aa5.83□□□□□ -1.48
NIPBL-207ENST00000513819 FRMD7Q6ZUT3 714 aa5.83□□□□□ -1.48
NIPBL-207ENST00000513819 TMC6Q7Z403 805 aa5.83□□□□□ -1.48
NIPBL-207ENST00000513819 ZSWIM9Q86XI8 627 aa5.83□□□□□ -1.48
NIPBL-207ENST00000513819 FAM126BQ8IXS8 530 aa5.83□□□□□ -1.48
NIPBL-207ENST00000513819 HIPK4Q8NE63 616 aa5.83□□□□□ -1.48
NIPBL-207ENST00000513819 TGFBRAP1Q8WUH2 860 aa5.83□□□□□ -1.48
NIPBL-207ENST00000513819 FOXRED1Q96CU9 486 aaPredicted RBP5.83□□□□□ -1.48
NIPBL-207ENST00000513819 TOE1Q96GM8 510 aaKnown RBP5.83□□□□□ -1.48
NIPBL-207ENST00000513819 ZFP64Q9NPA5 681 aa5.83□□□□□ -1.48
NIPBL-207ENST00000513819 ZIM2Q9NZV7 527 aa5.83□□□□□ -1.48
NIPBL-207ENST00000513819 RBPJLQ9UBG7 517 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms