RNA–Protein interactions for RNA: ENST00000456369.5

CHEK2-221, Transcript of checkpoint kinase 2, human

TSL 3

Gene CHEK2, Length 588 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHEK2-221	ENST00000456369	HAS3	O00219	553 aa		11.29	□□□□□ -0.6
CHEK2-221	ENST00000456369	STX6	O43752	255 aa		11.29	□□□□□ -0.6
CHEK2-221	ENST00000456369	PQBP1	O60828	265 aa	Known RBP	11.29	□□□□□ -0.6
CHEK2-221	ENST00000456369	MMP1	P03956	469 aa		11.29	□□□□□ -0.6
CHEK2-221	ENST00000456369	CYP3A7	P24462	503 aa		11.29	□□□□□ -0.6
CHEK2-221	ENST00000456369	PKP1	Q13835	747 aa		11.29	□□□□□ -0.6
CHEK2-221	ENST00000456369	EARS2	Q5JPH6	523 aa	Known RBP	11.29	□□□□□ -0.6
CHEK2-221	ENST00000456369	NFRKB	Q6P4R8	1299 aa		11.29	□□□□□ -0.6
CHEK2-221	ENST00000456369	SH3RF1	Q7Z6J0	888 aa		11.29	□□□□□ -0.6
CHEK2-221	ENST00000456369	SESTD1	Q86VW0	696 aa		11.29	□□□□□ -0.6
CHEK2-221	ENST00000456369	VTI1A	Q96AJ9	217 aa		11.29	□□□□□ -0.6
CHEK2-221	ENST00000456369	TRIM43	Q96BQ3	446 aa	Predicted RBP	11.29	□□□□□ -0.6
CHEK2-221	ENST00000456369	ZBED2	Q9BTP6	218 aa		11.29	□□□□□ -0.6
CHEK2-221	ENST00000456369	PRO3102	Q9H379	93 aa		11.29	□□□□□ -0.6
CHEK2-221	ENST00000456369	KIF3A	Q9Y496	699 aa		11.29	□□□□□ -0.6
CHEK2-221	ENST00000456369	NFASC	O94856	1347 aa		11.29	□□□□□ -0.6
CHEK2-221	ENST00000456369	GSTTP1	A0A1W2PQM5	241 aa		11.28	□□□□□ -0.6
CHEK2-221	ENST00000456369	KIAA0355	O15063	1070 aa		11.28	□□□□□ -0.6
CHEK2-221	ENST00000456369	DHX15	O43143	795 aa	Known RBP	11.28	□□□□□ -0.6
CHEK2-221	ENST00000456369	B4GALT4	O60513	344 aa		11.28	□□□□□ -0.6
CHEK2-221	ENST00000456369	CLTB	P09497	229 aa		11.28	□□□□□ -0.6
CHEK2-221	ENST00000456369	ZNF286B	P0CG31	522 aa		11.28	□□□□□ -0.6
CHEK2-221	ENST00000456369	ZSCAN22	P10073	491 aa	Predicted RBP	11.28	□□□□□ -0.6
CHEK2-221	ENST00000456369	SYN1	P17600	705 aa		11.28	□□□□□ -0.6
CHEK2-221	ENST00000456369	ITGB8	P26012	769 aa		11.28	□□□□□ -0.6
CHEK2-221	ENST00000456369	GJB2	P29033	226 aa		11.28	□□□□□ -0.6
CHEK2-221	ENST00000456369	HMGN5	P82970	282 aa	Known RBP	11.28	□□□□□ -0.6
CHEK2-221	ENST00000456369	NR5A1	Q13285	461 aa		11.28	□□□□□ -0.6
CHEK2-221	ENST00000456369	NBPF20	Q3BBV1	942 aa		11.28	□□□□□ -0.6
CHEK2-221	ENST00000456369	PRR16	Q569H4	304 aa		11.28	□□□□□ -0.6
CHEK2-221	ENST00000456369	KRT40	Q6A162	431 aa		11.28	□□□□□ -0.6
CHEK2-221	ENST00000456369	MOXD1	Q6UVY6	613 aa		11.28	□□□□□ -0.6
CHEK2-221	ENST00000456369	KRT25	Q7Z3Z0	450 aa		11.28	□□□□□ -0.6
CHEK2-221	ENST00000456369	PLA2G4D	Q86XP0	818 aa		11.28	□□□□□ -0.6
CHEK2-221	ENST00000456369	MBOAT7	Q96N66	472 aa		11.28	□□□□□ -0.6
CHEK2-221	ENST00000456369	CTAGE1	Q96RT6	745 aa		11.28	□□□□□ -0.6
CHEK2-221	ENST00000456369	TBX21	Q9UL17	535 aa		11.28	□□□□□ -0.6
CHEK2-221	ENST00000456369	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	11.28	□□□□□ -0.6
CHEK2-221	ENST00000456369	MROH7	Q68CQ1	1323 aa		11.28	□□□□□ -0.6
CHEK2-221	ENST00000456369	KIAA1217	Q5T5P2	1943 aa		11.27	□□□□□ -0.6
CHEK2-221	ENST00000456369	ALPK3	Q96L96	1907 aa		11.27	□□□□□ -0.6
CHEK2-221	ENST00000456369	DCDC2C	A8MYV0	355 aa		11.27	□□□□□ -0.61
CHEK2-221	ENST00000456369	BTBD18	B2RXH4	712 aa		11.27	□□□□□ -0.61
CHEK2-221	ENST00000456369	TK2	O00142	265 aa		11.27	□□□□□ -0.61
CHEK2-221	ENST00000456369	IPO5	O00410	1097 aa	Known RBP	11.27	□□□□□ -0.61
CHEK2-221	ENST00000456369	NOP56	O00567	594 aa	Known RBP	11.27	□□□□□ -0.61
CHEK2-221	ENST00000456369	CCNE2	O96020	404 aa		11.27	□□□□□ -0.61
CHEK2-221	ENST00000456369	LGALS2	P05162	132 aa		11.27	□□□□□ -0.61
CHEK2-221	ENST00000456369	SYT1	P21579	422 aa		11.27	□□□□□ -0.61
CHEK2-221	ENST00000456369	KRT2	P35908	639 aa		11.27	□□□□□ -0.61
CHEK2-221	ENST00000456369	ZNF76	P36508	570 aa		11.27	□□□□□ -0.61
CHEK2-221	ENST00000456369	SET	Q01105	290 aa	Predicted RBP	11.27	□□□□□ -0.61
CHEK2-221	ENST00000456369	PTPN11	Q06124	597 aa	Predicted RBP	11.27	□□□□□ -0.61
CHEK2-221	ENST00000456369	NONO	Q15233	471 aa	Known RBP eCLIP	11.27	□□□□□ -0.61
CHEK2-221	ENST00000456369	KLHL40	Q2TBA0	621 aa		11.27	□□□□□ -0.61
CHEK2-221	ENST00000456369	PROX2	Q3B8N5	592 aa		11.27	□□□□□ -0.61
CHEK2-221	ENST00000456369		Q4G0T1	1027 aa		11.27	□□□□□ -0.61
CHEK2-221	ENST00000456369	ADGRD1	Q6QNK2	874 aa		11.27	□□□□□ -0.61
CHEK2-221	ENST00000456369	FBXO18	Q8NFZ0	1043 aa		11.27	□□□□□ -0.61
CHEK2-221	ENST00000456369	PPP1R13L	Q8WUF5	828 aa		11.27	□□□□□ -0.61
CHEK2-221	ENST00000456369	GDF15	Q99988	308 aa		11.27	□□□□□ -0.61
CHEK2-221	ENST00000456369	SLC4A5	Q9BY07	1137 aa		11.27	□□□□□ -0.61
CHEK2-221	ENST00000456369	TRPV6	Q9H1D0	765 aa		11.27	□□□□□ -0.61
CHEK2-221	ENST00000456369	JPH1	Q9HDC5	661 aa	Predicted RBP	11.27	□□□□□ -0.61
CHEK2-221	ENST00000456369	PKD2L1	Q9P0L9	805 aa		11.27	□□□□□ -0.61
CHEK2-221	ENST00000456369	CEP290	O15078	2479 aa		11.26	□□□□□ -0.61
CHEK2-221	ENST00000456369	IGKV6D-21	A0A0A0MT36	114 aa		11.26	□□□□□ -0.61
CHEK2-221	ENST00000456369		H3BRB1	525 aa		11.26	□□□□□ -0.61
CHEK2-221	ENST00000456369	MSH4	O15457	936 aa		11.26	□□□□□ -0.61
CHEK2-221	ENST00000456369	ATG7	O95352	703 aa		11.26	□□□□□ -0.61
CHEK2-221	ENST00000456369	TDP2	O95551	362 aa		11.26	□□□□□ -0.61
CHEK2-221	ENST00000456369	F13A1	P00488	732 aa		11.26	□□□□□ -0.61
CHEK2-221	ENST00000456369	HOXC8	P31273	242 aa		11.26	□□□□□ -0.61
CHEK2-221	ENST00000456369	DEK	P35659	375 aa	Known RBP	11.26	□□□□□ -0.61
CHEK2-221	ENST00000456369	TCF7	P36402	384 aa	Predicted RBP	11.26	□□□□□ -0.61
CHEK2-221	ENST00000456369	ACTR2	P61160	394 aa		11.26	□□□□□ -0.61
CHEK2-221	ENST00000456369	SP4	Q02446	784 aa		11.26	□□□□□ -0.61
CHEK2-221	ENST00000456369	HIC1	Q14526	733 aa		11.26	□□□□□ -0.61
CHEK2-221	ENST00000456369	CSPP1	Q1MSJ5	1256 aa		11.26	□□□□□ -0.61
CHEK2-221	ENST00000456369	INF2	Q27J81	1249 aa		11.26	□□□□□ -0.61
CHEK2-221	ENST00000456369	KIAA0753	Q2KHM9	967 aa		11.26	□□□□□ -0.61
CHEK2-221	ENST00000456369	MCTP1	Q6DN14	999 aa		11.26	□□□□□ -0.61
CHEK2-221	ENST00000456369	PPP4R3A	Q6IN85	833 aa		11.26	□□□□□ -0.61
CHEK2-221	ENST00000456369	PIK3AP1	Q6ZUJ8	805 aa		11.26	□□□□□ -0.61
CHEK2-221	ENST00000456369	TRIM50	Q86XT4	487 aa		11.26	□□□□□ -0.61
CHEK2-221	ENST00000456369	DIS3L2	Q8IYB7	885 aa	Known RBP	11.26	□□□□□ -0.61
CHEK2-221	ENST00000456369	TMEM87A	Q8NBN3	555 aa		11.26	□□□□□ -0.61
CHEK2-221	ENST00000456369	SEPT1	Q8WYJ6	367 aa		11.26	□□□□□ -0.61
CHEK2-221	ENST00000456369	C8orf76	Q96K31	380 aa		11.26	□□□□□ -0.61
CHEK2-221	ENST00000456369	PCYT2	Q99447	389 aa		11.26	□□□□□ -0.61
CHEK2-221	ENST00000456369	SDF4	Q9BRK5	362 aa		11.26	□□□□□ -0.61
CHEK2-221	ENST00000456369	ZNF577	Q9BSK1	485 aa		11.26	□□□□□ -0.61
CHEK2-221	ENST00000456369	KATNAL1	Q9BW62	490 aa		11.26	□□□□□ -0.61
CHEK2-221	ENST00000456369	TUT1	Q9H6E5	874 aa	Known RBP	11.26	□□□□□ -0.61
CHEK2-221	ENST00000456369	NPDC1	Q9NQX5	325 aa	Predicted RBP	11.26	□□□□□ -0.61
CHEK2-221	ENST00000456369	TRMT13	Q9NUP7	481 aa	Known RBP	11.26	□□□□□ -0.61
CHEK2-221	ENST00000456369	TMEM39A	Q9NV64	488 aa		11.26	□□□□□ -0.61
CHEK2-221	ENST00000456369	SLC9A2	Q9UBY0	812 aa		11.26	□□□□□ -0.61
CHEK2-221	ENST00000456369	VPS9D1	Q9Y2B5	631 aa		11.26	□□□□□ -0.61
CHEK2-221	ENST00000456369	CCDC194	A0A1B0GVG4	234 aa		11.25	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 115.3 ms