RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 CC2D1AQ6P1N0 951 aaPredicted RBP6.38□□□□□ -1.39
HMGB3P6-201ENST00000444896 FKBP9P1Q75LS8 142 aa6.38□□□□□ -1.39
HMGB3P6-201ENST00000444896 SMARCC2Q8TAQ2 1214 aa6.38□□□□□ -1.39
HMGB3P6-201ENST00000444896 GOLGA2P5Q9HBQ8 144 aa6.38□□□□□ -1.39
HMGB3P6-201ENST00000444896 EPB41L4AQ9HCS5 686 aaPredicted RBP6.38□□□□□ -1.39
HMGB3P6-201ENST00000444896 ATP8A1Q9Y2Q0 1164 aa6.38□□□□□ -1.39
HMGB3P6-201ENST00000444896 H7C1D1 291 aa6.37□□□□□ -1.39
HMGB3P6-201ENST00000444896 MED14OSP0DP75 135 aa6.37□□□□□ -1.39
HMGB3P6-201ENST00000444896 GLDCP23378 1020 aa6.37□□□□□ -1.39
HMGB3P6-201ENST00000444896 LSSP48449 732 aa6.37□□□□□ -1.39
HMGB3P6-201ENST00000444896 KIF11P52732 1056 aa6.37□□□□□ -1.39
HMGB3P6-201ENST00000444896 DBPQ10586 325 aaPredicted RBP6.37□□□□□ -1.39
HMGB3P6-201ENST00000444896 TMEM132BQ14DG7 1078 aa6.37□□□□□ -1.39
HMGB3P6-201ENST00000444896 CATSPEREQ5SY80 951 aa6.37□□□□□ -1.39
HMGB3P6-201ENST00000444896 LIPIQ6XZB0 460 aa6.37□□□□□ -1.39
HMGB3P6-201ENST00000444896 B3GNT8Q7Z7M8 397 aa6.37□□□□□ -1.39
HMGB3P6-201ENST00000444896 KIAA1958Q8N8K9 716 aa6.37□□□□□ -1.39
HMGB3P6-201ENST00000444896 USP7Q93009 1102 aa6.37□□□□□ -1.39
HMGB3P6-201ENST00000444896 DDX11Q96FC9 970 aa6.37□□□□□ -1.39
HMGB3P6-201ENST00000444896 ELF4Q99607 663 aaPredicted RBP6.37□□□□□ -1.39
HMGB3P6-201ENST00000444896 IFT22Q9H7X7 185 aa6.37□□□□□ -1.39
HMGB3P6-201ENST00000444896 SPO11Q9Y5K1 396 aa6.37□□□□□ -1.39
HMGB3P6-201ENST00000444896 PRAMEF25A6NGN4 478 aa6.36□□□□□ -1.39
HMGB3P6-201ENST00000444896 ZEB2O60315 1214 aa6.36□□□□□ -1.39
HMGB3P6-201ENST00000444896 HIP1RO75146 1068 aa6.36□□□□□ -1.39
HMGB3P6-201ENST00000444896 PFKLP17858 780 aa6.36□□□□□ -1.39
HMGB3P6-201ENST00000444896 PTX3P26022 381 aaPredicted RBP6.36□□□□□ -1.39
HMGB3P6-201ENST00000444896 CDKN1CP49918 316 aaPredicted RBP6.36□□□□□ -1.39
HMGB3P6-201ENST00000444896 KPNA1P52294 538 aaPredicted RBP6.36□□□□□ -1.39
HMGB3P6-201ENST00000444896 IL2P60568 153 aa6.36□□□□□ -1.39
HMGB3P6-201ENST00000444896 HERVK_113P62684 666 aa6.36□□□□□ -1.39
HMGB3P6-201ENST00000444896 NKX3-2P78367 333 aa6.36□□□□□ -1.39
HMGB3P6-201ENST00000444896 SART3Q15020 963 aaKnown RBP6.36□□□□□ -1.39
HMGB3P6-201ENST00000444896 CD276Q5ZPR3 534 aa6.36□□□□□ -1.39
HMGB3P6-201ENST00000444896 ATG14Q6ZNE5 492 aa6.36□□□□□ -1.39
HMGB3P6-201ENST00000444896 STK32CQ86UX6 486 aa6.36□□□□□ -1.39
HMGB3P6-201ENST00000444896 NOX5Q96PH1 765 aa6.36□□□□□ -1.39
HMGB3P6-201ENST00000444896 TTC1Q99614 292 aa6.36□□□□□ -1.39
HMGB3P6-201ENST00000444896 GORASP1Q9BQQ3 440 aa6.36□□□□□ -1.39
HMGB3P6-201ENST00000444896 YIPF4Q9BSR8 244 aa6.36□□□□□ -1.39
HMGB3P6-201ENST00000444896 EMC7Q9NPA0 242 aa6.36□□□□□ -1.39
HMGB3P6-201ENST00000444896 NGRNQ9NPE2 291 aaKnown RBP6.36□□□□□ -1.39
HMGB3P6-201ENST00000444896 BTBD7Q9P203 1132 aa6.36□□□□□ -1.39
HMGB3P6-201ENST00000444896 PHLDB1Q86UU1 1377 aa6.35□□□□□ -1.39
HMGB3P6-201ENST00000444896 PLA2G1BP04054 148 aaKnown RBP6.35□□□□□ -1.39
HMGB3P6-201ENST00000444896 MMEP08473 750 aa6.35□□□□□ -1.39
HMGB3P6-201ENST00000444896 C1QTNF9P0C862 333 aa6.35□□□□□ -1.39
HMGB3P6-201ENST00000444896 NCLP19338 710 aaKnown RBP6.35□□□□□ -1.39
HMGB3P6-201ENST00000444896 LIMS1P48059 325 aa6.35□□□□□ -1.39
HMGB3P6-201ENST00000444896 STAT4Q14765 748 aa6.35□□□□□ -1.39
HMGB3P6-201ENST00000444896 ZNF174Q15697 407 aa6.35□□□□□ -1.39
HMGB3P6-201ENST00000444896 ZC3H18Q86VM9 953 aaKnown RBP6.35□□□□□ -1.39
HMGB3P6-201ENST00000444896 EFHBQ8N7U6 833 aa6.35□□□□□ -1.39
HMGB3P6-201ENST00000444896 BHLHE22Q8NFJ8 381 aaPredicted RBP6.35□□□□□ -1.39
HMGB3P6-201ENST00000444896 ZCRB1Q8TBF4 217 aaKnown RBP6.35□□□□□ -1.39
HMGB3P6-201ENST00000444896 ASB15Q8WXK1 588 aa6.35□□□□□ -1.39
HMGB3P6-201ENST00000444896 C16orf92Q96LL3 132 aa6.35□□□□□ -1.39
HMGB3P6-201ENST00000444896 TOX2Q96NM4 488 aa6.35□□□□□ -1.39
HMGB3P6-201ENST00000444896 ACSS2Q9NR19 701 aa6.35□□□□□ -1.39
HMGB3P6-201ENST00000444896 NOP58Q9Y2X3 529 aaKnown RBP6.35□□□□□ -1.39
HMGB3P6-201ENST00000444896 RFXAPO00287 272 aa6.34□□□□□ -1.39
HMGB3P6-201ENST00000444896 FOXP2O15409 715 aa6.34□□□□□ -1.39
HMGB3P6-201ENST00000444896 BRINP1O60477 761 aa6.34□□□□□ -1.39
HMGB3P6-201ENST00000444896 TSPAN15O95858 294 aa6.34□□□□□ -1.39
HMGB3P6-201ENST00000444896 ENO2P09104 434 aaPredicted RBP6.34□□□□□ -1.39
HMGB3P6-201ENST00000444896 CYP2C8P10632 490 aa6.34□□□□□ -1.39
HMGB3P6-201ENST00000444896 CDK11BP21127 795 aaKnown RBP6.34□□□□□ -1.39
HMGB3P6-201ENST00000444896 AOAHP28039 575 aa6.34□□□□□ -1.39
HMGB3P6-201ENST00000444896 EVA1CP58658 441 aa6.34□□□□□ -1.39
HMGB3P6-201ENST00000444896 SMAD3P84022 425 aaKnown RBP6.34□□□□□ -1.39
HMGB3P6-201ENST00000444896 PFKPQ01813 784 aa6.34□□□□□ -1.39
HMGB3P6-201ENST00000444896 ADAM9Q13443 819 aa6.34□□□□□ -1.39
HMGB3P6-201ENST00000444896 SSPNQ14714 243 aa6.34□□□□□ -1.39
HMGB3P6-201ENST00000444896 SMAD2Q15796 467 aaKnown RBP6.34□□□□□ -1.39
HMGB3P6-201ENST00000444896 ESRP1Q6NXG1 681 aaKnown RBP6.34□□□□□ -1.39
HMGB3P6-201ENST00000444896 TMC5Q6UXY8 1006 aa6.34□□□□□ -1.39
HMGB3P6-201ENST00000444896 RPUSD2Q8IZ73 545 aaKnown RBP6.34□□□□□ -1.39
HMGB3P6-201ENST00000444896 LINC00482Q8N8I6 264 aa6.34□□□□□ -1.39
HMGB3P6-201ENST00000444896 PRPF38AQ8NAV1 312 aaKnown RBP6.34□□□□□ -1.39
HMGB3P6-201ENST00000444896 ZSCAN18Q8TBC5 510 aaPredicted RBP6.34□□□□□ -1.39
HMGB3P6-201ENST00000444896 FOXRED1Q96CU9 486 aaPredicted RBP6.34□□□□□ -1.39
HMGB3P6-201ENST00000444896 SIGLEC10Q96LC7 697 aa6.34□□□□□ -1.39
HMGB3P6-201ENST00000444896 KRTAP4-8Q9BYQ9 185 aa6.34□□□□□ -1.39
HMGB3P6-201ENST00000444896 ZMAT4Q9H898 229 aa6.34□□□□□ -1.39
HMGB3P6-201ENST00000444896 SLC39A2Q9NP94 309 aa6.34□□□□□ -1.39
HMGB3P6-201ENST00000444896 ZNF839A8K0R7 811 aa6.33□□□□□ -1.4
HMGB3P6-201ENST00000444896 GOLGA6L22H0YM25 854 aa6.33□□□□□ -1.4
HMGB3P6-201ENST00000444896 GPR39O43194 453 aa6.33□□□□□ -1.4
HMGB3P6-201ENST00000444896 MPIG6BO95866 241 aa6.33□□□□□ -1.4
HMGB3P6-201ENST00000444896 CYP17A1P05093 508 aa6.33□□□□□ -1.4
HMGB3P6-201ENST00000444896 MC4RP32245 332 aa6.33□□□□□ -1.4
HMGB3P6-201ENST00000444896 FNTBP49356 437 aa6.33□□□□□ -1.4
HMGB3P6-201ENST00000444896 ITGA1P56199 1179 aa6.33□□□□□ -1.4
HMGB3P6-201ENST00000444896 HTRA3P83110 453 aa6.33□□□□□ -1.4
HMGB3P6-201ENST00000444896 OCRLQ01968 901 aa6.33□□□□□ -1.4
HMGB3P6-201ENST00000444896 RTP5Q14D33 572 aa6.33□□□□□ -1.4
HMGB3P6-201ENST00000444896 ATP13A4Q4VNC1 1196 aa6.33□□□□□ -1.4
HMGB3P6-201ENST00000444896 CIAPIN1Q6FI81 312 aa6.33□□□□□ -1.4
HMGB3P6-201ENST00000444896 RTN4RL1Q86UN2 441 aaPredicted RBP6.33□□□□□ -1.4
HMGB3P6-201ENST00000444896 FAM129CQ86XR2 697 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms