RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 ARHGAP4P98171 946 aa10.47□□□□□ -0.73
CUX1-206ENST00000437600 KCNMA1Q12791 1236 aa10.47□□□□□ -0.73
CUX1-206ENST00000437600 PDIA5Q14554 519 aa10.47□□□□□ -0.73
CUX1-206ENST00000437600 CCDC40Q4G0X9 1142 aa10.47□□□□□ -0.73
CUX1-206ENST00000437600 ARSHQ5FYA8 562 aa10.47□□□□□ -0.73
CUX1-206ENST00000437600 DPY19L2Q6NUT2 758 aa10.47□□□□□ -0.73
CUX1-206ENST00000437600 MOB2Q70IA6 237 aa10.47□□□□□ -0.73
CUX1-206ENST00000437600 MAEAQ7L5Y9 396 aa10.47□□□□□ -0.73
CUX1-206ENST00000437600 ZNF713Q8N859 430 aaPredicted RBP10.47□□□□□ -0.73
CUX1-206ENST00000437600 GMCL1Q96IK5 515 aa10.47□□□□□ -0.73
CUX1-206ENST00000437600 RAB34Q9BZG1 259 aa10.47□□□□□ -0.73
CUX1-206ENST00000437600 PGAP2Q9UHJ9 254 aa10.47□□□□□ -0.73
CUX1-206ENST00000437600 TMX2Q9Y320 296 aa10.47□□□□□ -0.73
CUX1-206ENST00000437600 CTAGE15A4D2H0 777 aa10.47□□□□□ -0.73
CUX1-206ENST00000437600 CLIC2O15247 247 aa10.47□□□□□ -0.73
CUX1-206ENST00000437600 AKR1B10O60218 316 aa10.47□□□□□ -0.73
CUX1-206ENST00000437600 PRPF6O94906 941 aaKnown RBP10.47□□□□□ -0.73
CUX1-206ENST00000437600 MOCS3O95396 460 aa10.47□□□□□ -0.73
CUX1-206ENST00000437600 CTAGE8P0CG41 777 aa10.47□□□□□ -0.73
CUX1-206ENST00000437600 SKIDA1Q1XH10 827 aa10.47□□□□□ -0.73
CUX1-206ENST00000437600 FAM26FQ5R3K3 315 aa10.47□□□□□ -0.73
CUX1-206ENST00000437600 CACNA2D4Q7Z3S7 1137 aa10.47□□□□□ -0.73
CUX1-206ENST00000437600 CTAGE6Q86UF2 777 aa10.47□□□□□ -0.73
CUX1-206ENST00000437600 CTAGE4Q8IX94 777 aa10.47□□□□□ -0.73
CUX1-206ENST00000437600 RABGGTAQ92696 567 aa10.47□□□□□ -0.73
CUX1-206ENST00000437600 FUT8Q9BYC5 575 aa10.47□□□□□ -0.73
CUX1-206ENST00000437600 CAPN6Q9Y6Q1 641 aa10.47□□□□□ -0.73
CUX1-206ENST00000437600 A0A1W2PQC6 194 aa10.47□□□□□ -0.73
CUX1-206ENST00000437600 CLGNO14967 610 aa10.47□□□□□ -0.73
CUX1-206ENST00000437600 ZNF76P36508 570 aa10.47□□□□□ -0.73
CUX1-206ENST00000437600 ZBED6P86452 979 aa10.47□□□□□ -0.73
CUX1-206ENST00000437600 CTTNQ14247 550 aaKnown RBP10.47□□□□□ -0.73
CUX1-206ENST00000437600 PLS1Q14651 629 aa10.47□□□□□ -0.73
CUX1-206ENST00000437600 TDRD12Q587J7 1177 aaKnown RBP10.47□□□□□ -0.73
CUX1-206ENST00000437600 PPP4R3AQ6IN85 833 aa10.47□□□□□ -0.73
CUX1-206ENST00000437600 MYOCDQ8IZQ8 938 aa10.47□□□□□ -0.73
CUX1-206ENST00000437600 AGBL1Q96MI9 1066 aa10.47□□□□□ -0.73
CUX1-206ENST00000437600 CUEDC2Q9H467 287 aa10.47□□□□□ -0.73
CUX1-206ENST00000437600 BMP2KQ9NSY1 1161 aaPredicted RBP10.47□□□□□ -0.73
CUX1-206ENST00000437600 ATAD5Q96QE3 1844 aa10.46□□□□□ -0.73
CUX1-206ENST00000437600 MYL1P05976 194 aa10.46□□□□□ -0.73
CUX1-206ENST00000437600 POLR2FP61218 127 aaKnown RBP10.46□□□□□ -0.73
CUX1-206ENST00000437600 SMC1AQ14683 1233 aaKnown RBP10.46□□□□□ -0.73
CUX1-206ENST00000437600 FAM43BQ6ZT52 329 aaPredicted RBP10.46□□□□□ -0.73
CUX1-206ENST00000437600 BHMT2Q9H2M3 363 aa10.46□□□□□ -0.73
CUX1-206ENST00000437600 GOPCQ9HD26 462 aa10.46□□□□□ -0.73
CUX1-206ENST00000437600 DDX39AO00148 427 aaKnown RBP10.46□□□□□ -0.74
CUX1-206ENST00000437600 EML1O00423 815 aa10.46□□□□□ -0.74
CUX1-206ENST00000437600 IPO7O95373 1038 aaKnown RBP10.46□□□□□ -0.74
CUX1-206ENST00000437600 CYP11B2P19099 503 aa10.46□□□□□ -0.74
CUX1-206ENST00000437600 FECHP22830 423 aa10.46□□□□□ -0.74
CUX1-206ENST00000437600 EPHX2P34913 555 aa10.46□□□□□ -0.74
CUX1-206ENST00000437600 MMP14P50281 582 aa10.46□□□□□ -0.74
CUX1-206ENST00000437600 PPARDQ03181 441 aa10.46□□□□□ -0.74
CUX1-206ENST00000437600 ADAM9Q13443 819 aa10.46□□□□□ -0.74
CUX1-206ENST00000437600 LRRC55Q6ZSA7 311 aa10.46□□□□□ -0.74
CUX1-206ENST00000437600 FAM83AQ86UY5 434 aa10.46□□□□□ -0.74
CUX1-206ENST00000437600 COG1Q8WTW3 980 aa10.46□□□□□ -0.74
CUX1-206ENST00000437600 SCFD1Q8WVM8 642 aa10.46□□□□□ -0.74
CUX1-206ENST00000437600 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.46□□□□□ -0.744e-6■■■■□ 23.2
CUX1-206ENST00000437600 GOLPH3Q9H4A6 298 aa10.46□□□□□ -0.74
CUX1-206ENST00000437600 VCPKMTQ9H867 229 aa10.46□□□□□ -0.74
CUX1-206ENST00000437600 PDE11AQ9HCR9 933 aa10.46□□□□□ -0.74
CUX1-206ENST00000437600 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.46□□□□□ -0.748e-7■■■■■ 154.8
CUX1-206ENST00000437600 ADARB2Q9NS39 739 aaKnown RBP10.46□□□□□ -0.74
CUX1-206ENST00000437600 EMILIN3Q9NT22 766 aa10.46□□□□□ -0.74
CUX1-206ENST00000437600 FAM53CQ9NYF3 392 aa10.46□□□□□ -0.74
CUX1-206ENST00000437600 PACSIN2Q9UNF0 486 aaPredicted RBP10.46□□□□□ -0.74
CUX1-206ENST00000437600 SIK3Q9Y2K2 1263 aa10.46□□□□□ -0.74
CUX1-206ENST00000437600 SAR1BQ9Y6B6 198 aa10.46□□□□□ -0.74
CUX1-206ENST00000437600 MYH10P35580 1976 aa10.45□□□□□ -0.74
CUX1-206ENST00000437600 GLTPD2A6NH11 291 aa10.45□□□□□ -0.74
CUX1-206ENST00000437600 H3BQF6 201 aa10.45□□□□□ -0.74
CUX1-206ENST00000437600 OAS2P29728 719 aaKnown RBP10.45□□□□□ -0.74
CUX1-206ENST00000437600 AMPD2Q01433 879 aa10.45□□□□□ -0.74
CUX1-206ENST00000437600 SLC7A5Q01650 507 aa10.45□□□□□ -0.74
CUX1-206ENST00000437600 TRIM14Q14142 442 aa10.45□□□□□ -0.74
CUX1-206ENST00000437600 PPP1R18Q6NYC8 613 aa10.45□□□□□ -0.74
CUX1-206ENST00000437600 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.45□□□□□ -0.74
CUX1-206ENST00000437600 TPH2Q8IWU9 490 aa10.45□□□□□ -0.74
CUX1-206ENST00000437600 GUF1Q8N442 669 aaKnown RBP10.45□□□□□ -0.74
CUX1-206ENST00000437600 PROCA1Q8NCQ7 364 aaPredicted RBP10.45□□□□□ -0.74
CUX1-206ENST00000437600 HDAC7Q8WUI4 952 aa10.45□□□□□ -0.74
CUX1-206ENST00000437600 TRERF1Q96PN7 1200 aa10.45□□□□□ -0.74
CUX1-206ENST00000437600 IFIH1Q9BYX4 1025 aaKnown RBP10.45□□□□□ -0.74
CUX1-206ENST00000437600 ZNF408Q9H9D4 720 aa10.45□□□□□ -0.74
CUX1-206ENST00000437600 CLEC11AQ9Y240 323 aa10.45□□□□□ -0.74
CUX1-206ENST00000437600 PVALEFA0A1B0GWK0 134 aa10.45□□□□□ -0.74
CUX1-206ENST00000437600 GRIN3BO60391 1043 aa10.45□□□□□ -0.74
CUX1-206ENST00000437600 C2orf54Q08AI8 447 aa10.45□□□□□ -0.74
CUX1-206ENST00000437600 KIF5AQ12840 1032 aa10.45□□□□□ -0.74
CUX1-206ENST00000437600 TNFAIP1Q13829 316 aa10.45□□□□□ -0.74
CUX1-206ENST00000437600 SPA17Q15506 151 aa10.45□□□□□ -0.74
CUX1-206ENST00000437600 TCERG1LQ5VWI1 586 aa10.45□□□□□ -0.74
CUX1-206ENST00000437600 MAP1SQ66K74 1059 aaPredicted RBP10.45□□□□□ -0.74
CUX1-206ENST00000437600 CEP112Q8N8E3 955 aa10.45□□□□□ -0.74
CUX1-206ENST00000437600 CAGE1Q8TC20 777 aa10.45□□□□□ -0.74
CUX1-206ENST00000437600 NOC3LQ8WTT2 800 aaKnown RBP10.45□□□□□ -0.74
CUX1-206ENST00000437600 WRNIP1Q96S55 665 aa10.45□□□□□ -0.74
CUX1-206ENST00000437600 HAUS4Q9H6D7 363 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms