RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 RTN1Q16799 776 aa8.88□□□□□ -0.99
VTI1A-202ENST00000432306 PRPF38BQ5VTL8 546 aaKnown RBP8.88□□□□□ -0.99
VTI1A-202ENST00000432306 NBPF10Q6P3W6 841 aaKnown RBP8.88□□□□□ -0.99
VTI1A-202ENST00000432306 PDXDC2PQ6P474 469 aa8.88□□□□□ -0.99
VTI1A-202ENST00000432306 KDM7AQ6ZMT4 941 aa8.88□□□□□ -0.99
VTI1A-202ENST00000432306 TAX1BP1Q86VP1 789 aa8.88□□□□□ -0.99
VTI1A-202ENST00000432306 IRF2BP1Q8IU81 584 aa8.88□□□□□ -0.99
VTI1A-202ENST00000432306 CREG2Q8IUH2 290 aa8.88□□□□□ -0.99
VTI1A-202ENST00000432306 DNAJC10Q8IXB1 793 aa8.88□□□□□ -0.99
VTI1A-202ENST00000432306 NBPF15Q8N660 670 aa8.88□□□□□ -0.99
VTI1A-202ENST00000432306 MB21D1Q8N884 522 aa8.88□□□□□ -0.99
VTI1A-202ENST00000432306 TRIM58Q8NG06 486 aa8.88□□□□□ -0.99
VTI1A-202ENST00000432306 MAGEC3Q8TD91 643 aa8.88□□□□□ -0.99
VTI1A-202ENST00000432306 NOC3LQ8WTT2 800 aaKnown RBP8.88□□□□□ -0.99
VTI1A-202ENST00000432306 CPLX3Q8WVH0 158 aa8.88□□□□□ -0.99
VTI1A-202ENST00000432306 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.88□□□□□ -0.99
VTI1A-202ENST00000432306 CABS1Q96KC9 395 aa8.88□□□□□ -0.99
VTI1A-202ENST00000432306 CHP1Q99653 195 aa8.88□□□□□ -0.99
VTI1A-202ENST00000432306 PHF20Q9BVI0 1012 aa8.88□□□□□ -0.99
VTI1A-202ENST00000432306 PUS3Q9BZE2 481 aaKnown RBP8.88□□□□□ -0.99
VTI1A-202ENST00000432306 THAP9Q9H5L6 903 aa8.88□□□□□ -0.99
VTI1A-202ENST00000432306 RNF14Q9UBS8 474 aa8.88□□□□□ -0.99
VTI1A-202ENST00000432306 DENND2AQ9ULE3 1009 aa8.88□□□□□ -0.99
VTI1A-202ENST00000432306 LUC7L2Q9Y383 392 aaKnown RBP8.88□□□□□ -0.99
VTI1A-202ENST00000432306 COL11A2P13942 1736 aaPredicted RBP8.88□□□□□ -0.99
VTI1A-202ENST00000432306 SLX4Q8IY92 1834 aa8.88□□□□□ -0.99
VTI1A-202ENST00000432306 MYH7P12883 1935 aa8.88□□□□□ -0.99
VTI1A-202ENST00000432306 UBR2Q8IWV8 1755 aa8.88□□□□□ -0.99
VTI1A-202ENST00000432306 TTC26A0AVF1 554 aa8.88□□□□□ -0.99
VTI1A-202ENST00000432306 CCDC85CA6NKD9 419 aa8.88□□□□□ -0.99
VTI1A-202ENST00000432306 USP17L5A8MUK1 530 aa8.88□□□□□ -0.99
VTI1A-202ENST00000432306 PDE2AO00408 941 aaPredicted RBP8.88□□□□□ -0.99
VTI1A-202ENST00000432306 LDHBP07195 334 aaKnown RBP8.88□□□□□ -0.99
VTI1A-202ENST00000432306 SRGNP10124 158 aa8.88□□□□□ -0.99
VTI1A-202ENST00000432306 XBP1P17861 261 aa8.88□□□□□ -0.99
VTI1A-202ENST00000432306 GPTP24298 496 aa8.88□□□□□ -0.99
VTI1A-202ENST00000432306 ADORA1P30542 326 aa8.88□□□□□ -0.99
VTI1A-202ENST00000432306 MAP2K2P36507 400 aa8.88□□□□□ -0.99
VTI1A-202ENST00000432306 MASP1P48740 699 aa8.88□□□□□ -0.99
VTI1A-202ENST00000432306 DNM2P50570 870 aa8.88□□□□□ -0.99
VTI1A-202ENST00000432306 EPHB1P54762 984 aa8.88□□□□□ -0.99
VTI1A-202ENST00000432306 PSMD2Q13200 908 aa8.88□□□□□ -0.99
VTI1A-202ENST00000432306 DEFB115Q30KQ5 88 aa8.88□□□□□ -0.99
VTI1A-202ENST00000432306 CCDC122Q5T0U0 273 aa8.88□□□□□ -0.99
VTI1A-202ENST00000432306 AKNAD1Q5T1N1 836 aa8.88□□□□□ -0.99
VTI1A-202ENST00000432306 GJC2Q5T442 439 aaPredicted RBP8.88□□□□□ -0.99
VTI1A-202ENST00000432306 WLSQ5T9L3 541 aa8.88□□□□□ -0.99
VTI1A-202ENST00000432306 MICALCLQ6ZW33 695 aa8.88□□□□□ -0.99
VTI1A-202ENST00000432306 KIAA0907Q7Z7F0 614 aaPredicted RBP8.88□□□□□ -0.99
VTI1A-202ENST00000432306 RAB11FIP4Q86YS3 637 aa8.88□□□□□ -0.99
VTI1A-202ENST00000432306 VGLL2Q8N8G2 317 aa8.88□□□□□ -0.99
VTI1A-202ENST00000432306 SYMPKQ92797 1274 aaKnown RBP8.88□□□□□ -0.99
VTI1A-202ENST00000432306 LRRC27Q9C0I9 530 aa8.88□□□□□ -0.99
VTI1A-202ENST00000432306 ZNHIT6Q9NWK9 470 aaKnown RBP8.88□□□□□ -0.99
VTI1A-202ENST00000432306 ZSWIM5Q9P217 1185 aa8.88□□□□□ -0.99
VTI1A-202ENST00000432306 POLG2Q9UHN1 485 aa8.88□□□□□ -0.99
VTI1A-202ENST00000432306 GUCA1BQ9UMX6 200 aa8.88□□□□□ -0.99
VTI1A-202ENST00000432306 SNX12Q9UMY4 172 aa8.88□□□□□ -0.99
VTI1A-202ENST00000432306 CEP83Q9Y592 693 aa8.88□□□□□ -0.99
VTI1A-202ENST00000432306 TRPM7Q96QT4 1865 aa8.87□□□□□ -0.99
VTI1A-202ENST00000432306 AKAP11Q9UKA4 1901 aa8.87□□□□□ -0.99
VTI1A-202ENST00000432306 RASSF10A6NK89 507 aa8.87□□□□□ -0.99
VTI1A-202ENST00000432306 PIK3CDO00329 1044 aa8.87□□□□□ -0.99
VTI1A-202ENST00000432306 CHUKO15111 745 aa8.87□□□□□ -0.99
VTI1A-202ENST00000432306 PRPF3O43395 683 aaKnown RBP8.87□□□□□ -0.99
VTI1A-202ENST00000432306 RASSF9O75901 435 aa8.87□□□□□ -0.99
VTI1A-202ENST00000432306 PCCAP05165 728 aaPredicted RBP8.87□□□□□ -0.99
VTI1A-202ENST00000432306 CYP19A1P11511 503 aaPredicted RBP8.87□□□□□ -0.99
VTI1A-202ENST00000432306 TCP1P17987 556 aaKnown RBP8.87□□□□□ -0.99
VTI1A-202ENST00000432306 GNAT2P19087 354 aa8.87□□□□□ -0.99
VTI1A-202ENST00000432306 RASA1P20936 1047 aa8.87□□□□□ -0.99
VTI1A-202ENST00000432306 VAV2P52735 878 aa8.87□□□□□ -0.99
VTI1A-202ENST00000432306 SMTNP53814 917 aa8.87□□□□□ -0.99
VTI1A-202ENST00000432306 RACK1P63244 317 aaKnown RBP8.87□□□□□ -0.99
VTI1A-202ENST00000432306 ZBED6P86452 979 aa8.87□□□□□ -0.99
VTI1A-202ENST00000432306 CTDSPL2Q05D32 466 aa8.87□□□□□ -0.99
VTI1A-202ENST00000432306 NR5A1Q13285 461 aa8.87□□□□□ -0.99
VTI1A-202ENST00000432306 SART3Q15020 963 aaKnown RBP8.87□□□□□ -0.99
VTI1A-202ENST00000432306 CCDC57Q2TAC2 916 aa8.87□□□□□ -0.99
VTI1A-202ENST00000432306 GRAMD1BQ3KR37 738 aa8.87□□□□□ -0.99
VTI1A-202ENST00000432306 COBLL1Q53SF7 1204 aa8.87□□□□□ -0.99
VTI1A-202ENST00000432306 BRDTQ58F21 947 aaPredicted RBP8.87□□□□□ -0.99
VTI1A-202ENST00000432306 ACBD5Q5T8D3 534 aaPredicted RBP8.87□□□□□ -0.99
VTI1A-202ENST00000432306 ARL6IP4Q66PJ3 421 aaKnown RBP8.87□□□□□ -0.99
VTI1A-202ENST00000432306 NFXL1Q6ZNB6 911 aa8.87□□□□□ -0.99
VTI1A-202ENST00000432306 TMC7Q7Z402 723 aa8.87□□□□□ -0.99
VTI1A-202ENST00000432306 ADSSL1Q8N142 457 aa8.87□□□□□ -0.99
VTI1A-202ENST00000432306 PGBD3Q8N328 593 aa8.87□□□□□ -0.99
VTI1A-202ENST00000432306 PNMA1Q8ND90 353 aa8.87□□□□□ -0.99
VTI1A-202ENST00000432306 RIN2Q8WYP3 895 aaPredicted RBP8.87□□□□□ -0.99
VTI1A-202ENST00000432306 CNKSR1Q969H4 720 aa8.87□□□□□ -0.99
VTI1A-202ENST00000432306 EPSTI1Q96J88 318 aa8.87□□□□□ -0.99
VTI1A-202ENST00000432306 BRIP1Q9BX63 1249 aa8.87□□□□□ -0.99
VTI1A-202ENST00000432306 RBCK1Q9BYM8 510 aa8.87□□□□□ -0.99
VTI1A-202ENST00000432306 ZBTB3Q9H5J0 574 aa8.87□□□□□ -0.99
VTI1A-202ENST00000432306 TAF1DQ9H5J8 278 aaPredicted RBP8.87□□□□□ -0.99
VTI1A-202ENST00000432306 EPB41L4AQ9HCS5 686 aaPredicted RBP8.87□□□□□ -0.99
VTI1A-202ENST00000432306 SIRPGQ9P1W8 387 aa8.87□□□□□ -0.99
VTI1A-202ENST00000432306 CTNND2Q9UQB3 1225 aa8.87□□□□□ -0.99
VTI1A-202ENST00000432306 MRPS23Q9Y3D9 190 aaKnown RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms