RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 TMEM60Q9H2L4 133 aa14.3□□□□□ -0.12
PTPRN2-202ENST00000389416 THAP9Q9H5L6 903 aa14.3□□□□□ -0.12
PTPRN2-202ENST00000389416 PDS5AQ29RF7 1337 aaKnown RBP14.3□□□□□ -0.12
PTPRN2-202ENST00000389416 CCL15-CCL14A0A0B4J2E2 113 aa14.3□□□□□ -0.12
PTPRN2-202ENST00000389416 PVALEFA0A1B0GWK0 134 aa14.3□□□□□ -0.12
PTPRN2-202ENST00000389416 WNT10BO00744 389 aa14.3□□□□□ -0.12
PTPRN2-202ENST00000389416 ZEB2O60315 1214 aa14.3□□□□□ -0.12
PTPRN2-202ENST00000389416 TXNP10599 105 aaKnown RBP14.3□□□□□ -0.12
PTPRN2-202ENST00000389416 CCL15Q16663 113 aa14.3□□□□□ -0.12
PTPRN2-202ENST00000389416 TCP11X2Q5H9J9 407 aa14.3□□□□□ -0.12
PTPRN2-202ENST00000389416 LRP10Q7Z4F1 713 aa14.3□□□□□ -0.12
PTPRN2-202ENST00000389416 ERO1AQ96HE7 468 aa14.3□□□□□ -0.12
PTPRN2-202ENST00000389416 ANKRD36BP1Q96IX9 119 aa14.3□□□□□ -0.12
PTPRN2-202ENST00000389416 MAP3K14Q99558 947 aa14.3□□□□□ -0.12
PTPRN2-202ENST00000389416 HAUS4Q9H6D7 363 aa14.3□□□□□ -0.12
PTPRN2-202ENST00000389416 AMFRQ9UKV5 643 aa14.3□□□□□ -0.12
PTPRN2-202ENST00000389416 A0A1W2PRG0 241 aa14.29□□□□□ -0.12
PTPRN2-202ENST00000389416 SEC23AQ15436 765 aa14.29□□□□□ -0.12
PTPRN2-202ENST00000389416 FAM167AQ96KS9 214 aa14.29□□□□□ -0.12
PTPRN2-202ENST00000389416 ADARB2Q9NS39 739 aaKnown RBP14.29□□□□□ -0.12
PTPRN2-202ENST00000389416 ABL1P00519 1130 aa14.29□□□□□ -0.12
PTPRN2-202ENST00000389416 ETF1P62495 437 aaKnown RBP14.29□□□□□ -0.12
PTPRN2-202ENST00000389416 TUBB4BP68371 445 aa14.29□□□□□ -0.12
PTPRN2-202ENST00000389416 SCYL2Q6P3W7 929 aa14.29□□□□□ -0.12
PTPRN2-202ENST00000389416 FAM133AQ8N9E0 248 aa14.29□□□□□ -0.12
PTPRN2-202ENST00000389416 HPS3Q969F9 1004 aa14.29□□□□□ -0.12
PTPRN2-202ENST00000389416 LRRC45Q96CN5 670 aa14.29□□□□□ -0.12
PTPRN2-202ENST00000389416 SALL1Q9NSC2 1324 aa14.29□□□□□ -0.12
PTPRN2-202ENST00000389416 ZNF233A6NK53 670 aa14.29□□□□□ -0.12
PTPRN2-202ENST00000389416 GFPT2O94808 682 aa14.29□□□□□ -0.12
PTPRN2-202ENST00000389416 NSFP46459 744 aaKnown RBP14.29□□□□□ -0.12
PTPRN2-202ENST00000389416 APOBEC3HQ6NTF7 200 aaKnown RBP14.29□□□□□ -0.12
PTPRN2-202ENST00000389416 CYFIP1Q7L576 1253 aa14.29□□□□□ -0.12
PTPRN2-202ENST00000389416 CCDC91Q7Z6B0 441 aa14.29□□□□□ -0.12
PTPRN2-202ENST00000389416 TRIM58Q8NG06 486 aa14.29□□□□□ -0.12
PTPRN2-202ENST00000389416 PSPC1Q8WXF1 523 aaKnown RBP14.29□□□□□ -0.12
PTPRN2-202ENST00000389416 UBE2TQ9NPD8 197 aaPredicted RBP14.29□□□□□ -0.12
PTPRN2-202ENST00000389416 SLC9A2Q9UBY0 812 aa14.29□□□□□ -0.12
PTPRN2-202ENST00000389416 SAR1BQ9Y6B6 198 aa14.29□□□□□ -0.12
PTPRN2-202ENST00000389416 DENND3A2RUS2 1198 aa14.29□□□□□ -0.12
PTPRN2-202ENST00000389416 ZSCAN20P17040 1043 aaPredicted RBP14.29□□□□□ -0.12
PTPRN2-202ENST00000389416 PPM1FP49593 454 aaPredicted RBP14.29□□□□□ -0.12
PTPRN2-202ENST00000389416 EPHA7Q15375 998 aa14.29□□□□□ -0.12
PTPRN2-202ENST00000389416 MAPK6Q16659 721 aa14.29□□□□□ -0.12
PTPRN2-202ENST00000389416 CCDC117Q8IWD4 279 aaPredicted RBP14.29□□□□□ -0.12
PTPRN2-202ENST00000389416 NEK9Q8TD19 979 aa14.29□□□□□ -0.12
PTPRN2-202ENST00000389416 SMIM22K7EJ46 135 aa14.28□□□□□ -0.12
PTPRN2-202ENST00000389416 KCNK3O14649 394 aa14.28□□□□□ -0.12
PTPRN2-202ENST00000389416 XPOTO43592 962 aaKnown RBP14.28□□□□□ -0.12
PTPRN2-202ENST00000389416 EPHX2P34913 555 aa14.28□□□□□ -0.12
PTPRN2-202ENST00000389416 GPBP1L1Q9HC44 474 aaPredicted RBP14.28□□□□□ -0.12
PTPRN2-202ENST00000389416 JPH1Q9HDC5 661 aaPredicted RBP14.28□□□□□ -0.12
PTPRN2-202ENST00000389416 GGPS1O95749 300 aa14.28□□□□□ -0.12
PTPRN2-202ENST00000389416 CD58P19256 250 aa14.28□□□□□ -0.12
PTPRN2-202ENST00000389416 RPS6P62753 249 aaKnown RBP14.28□□□□□ -0.12
PTPRN2-202ENST00000389416 ZFPM1Q8IX07 1006 aa14.28□□□□□ -0.12
PTPRN2-202ENST00000389416 ASIC3Q9UHC3 531 aa14.28□□□□□ -0.12
PTPRN2-202ENST00000389416 CD2APQ9Y5K6 639 aa14.28□□□□□ -0.12
PTPRN2-202ENST00000389416 CLDN3O15551 220 aa14.28□□□□□ -0.12
PTPRN2-202ENST00000389416 PDIA5Q14554 519 aa14.28□□□□□ -0.12
PTPRN2-202ENST00000389416 CFAP221Q4G0U5 840 aa14.28□□□□□ -0.12
PTPRN2-202ENST00000389416 CLEC17AQ6ZS10 378 aa14.28□□□□□ -0.12
PTPRN2-202ENST00000389416 METTL16Q86W50 562 aaKnown RBP14.28□□□□□ -0.12
PTPRN2-202ENST00000389416 CCSER1Q9C0I3 900 aa14.28□□□□□ -0.12
PTPRN2-202ENST00000389416 SLIT3O75094 1523 aa14.28□□□□□ -0.12
PTPRN2-202ENST00000389416 CAPN9O14815 690 aa14.27□□□□□ -0.12
PTPRN2-202ENST00000389416 RRP9O43818 475 aaKnown RBP14.27□□□□□ -0.12
PTPRN2-202ENST00000389416 NBPF11Q86T75 865 aa14.27□□□□□ -0.12
PTPRN2-202ENST00000389416 RHPN2Q8IUC4 686 aa14.27□□□□□ -0.12
PTPRN2-202ENST00000389416 VSTM4Q8IW00 320 aa14.27□□□□□ -0.12
PTPRN2-202ENST00000389416 C7orf31Q8N865 590 aa14.27□□□□□ -0.12
PTPRN2-202ENST00000389416 PAIP2Q9BPZ3 127 aaKnown RBP14.27□□□□□ -0.12
PTPRN2-202ENST00000389416 FHDC1Q9C0D6 1143 aaPredicted RBP14.27□□□□□ -0.12
PTPRN2-202ENST00000389416 ASB14A6NK59 587 aa14.27□□□□□ -0.12
PTPRN2-202ENST00000389416 NR3C1P04150 777 aa14.27□□□□□ -0.12
PTPRN2-202ENST00000389416 FERP16591 822 aa14.27□□□□□ -0.12
PTPRN2-202ENST00000389416 ALCAMQ13740 583 aa14.27□□□□□ -0.12
PTPRN2-202ENST00000389416 PPP4R3CPQ6ZMV5 832 aa14.27□□□□□ -0.12
PTPRN2-202ENST00000389416 CCDC105Q8IYK2 499 aa14.27□□□□□ -0.12
PTPRN2-202ENST00000389416 TCP11Q8WWU5 503 aa14.27□□□□□ -0.12
PTPRN2-202ENST00000389416 CYP27A1Q02318 531 aa14.27□□□□□ -0.13
PTPRN2-202ENST00000389416 GRIN1Q05586 938 aa14.27□□□□□ -0.13
PTPRN2-202ENST00000389416 RASGRP2Q7LDG7 609 aa14.27□□□□□ -0.13
PTPRN2-202ENST00000389416 ADAT2Q7Z6V5 191 aaKnown RBP14.27□□□□□ -0.13
PTPRN2-202ENST00000389416 UBE2Q2Q8WVN8 375 aa14.27□□□□□ -0.13
PTPRN2-202ENST00000389416 SHMT1P34896 483 aa14.27□□□□□ -0.13
PTPRN2-202ENST00000389416 BPIFB4P59827 614 aa14.27□□□□□ -0.13
PTPRN2-202ENST00000389416 DNAJC21Q5F1R6 531 aaKnown RBP14.27□□□□□ -0.13
PTPRN2-202ENST00000389416 MAP1SQ66K74 1059 aaPredicted RBP14.27□□□□□ -0.13
PTPRN2-202ENST00000389416 CCDC97Q96F63 343 aaPredicted RBP14.27□□□□□ -0.13
PTPRN2-202ENST00000389416 TRIM9Q9C026 710 aa14.27□□□□□ -0.13
PTPRN2-202ENST00000389416 IQCGQ9H095 443 aaKnown RBP14.27□□□□□ -0.13
PTPRN2-202ENST00000389416 FAM204AQ9H8W3 233 aa14.27□□□□□ -0.13
PTPRN2-202ENST00000389416 AK9Q5TCS8 1911 aa14.26□□□□□ -0.13
PTPRN2-202ENST00000389416 COPB2P35606 906 aa14.26□□□□□ -0.13
PTPRN2-202ENST00000389416 STAT5BP51692 787 aa14.26□□□□□ -0.13
PTPRN2-202ENST00000389416 RNASELQ05823 741 aaKnown RBP14.26□□□□□ -0.13
PTPRN2-202ENST00000389416 ELF2Q15723 593 aa14.26□□□□□ -0.13
PTPRN2-202ENST00000389416 PLCD3Q8N3E9 789 aa14.26□□□□□ -0.13
PTPRN2-202ENST00000389416 XXYLT1Q8NBI6 393 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms