RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 PPP1R15BQ5SWA1 713 aa22.44■■□□□ 1.18
TMEFF1-201ENST00000374879 C4orf32Q8N8J7 132 aa22.44■■□□□ 1.18
TMEFF1-201ENST00000374879 EPAS1Q99814 870 aa22.44■■□□□ 1.18
TMEFF1-201ENST00000374879 PACSIN1Q9BY11 444 aa22.44■■□□□ 1.18
TMEFF1-201ENST00000374879 ARHGEF3Q9NR81 526 aa22.44■■□□□ 1.18
TMEFF1-201ENST00000374879 KBTBD4Q9NVX7 518 aa22.44■■□□□ 1.18
TMEFF1-201ENST00000374879 ANKRD36CQ5JPF3 1778 aa22.44■■□□□ 1.18
TMEFF1-201ENST00000374879 A0A1B0GVG6 124 aa22.44■■□□□ 1.18
TMEFF1-201ENST00000374879 LRRD1A4D1F6 860 aa22.44■■□□□ 1.18
TMEFF1-201ENST00000374879 GSG1L2A8MUP6 293 aa22.44■■□□□ 1.18
TMEFF1-201ENST00000374879 IFNAR2P48551 515 aa22.44■■□□□ 1.18
TMEFF1-201ENST00000374879 COPS2P61201 443 aa22.44■■□□□ 1.18
TMEFF1-201ENST00000374879 GOLPH3Q9H4A6 298 aa22.44■■□□□ 1.18
TMEFF1-201ENST00000374879 NLRC4Q9NPP4 1024 aa22.44■■□□□ 1.18
TMEFF1-201ENST00000374879 INTS9Q9NV88 658 aaKnown RBP22.44■■□□□ 1.18
TMEFF1-201ENST00000374879 MROH5Q6ZUA9 1318 aa22.44■■□□□ 1.18
TMEFF1-201ENST00000374879 BCL9O00512 1426 aa22.44■■□□□ 1.18
TMEFF1-201ENST00000374879 RCAN1P53805 252 aa22.44■■□□□ 1.18
TMEFF1-201ENST00000374879 RASGRF1Q13972 1273 aa22.44■■□□□ 1.18
TMEFF1-201ENST00000374879 RPS6KA1Q15418 735 aa22.44■■□□□ 1.18
TMEFF1-201ENST00000374879 MTHFD1LQ6UB35 978 aa22.44■■□□□ 1.18
TMEFF1-201ENST00000374879 HPS3Q969F9 1004 aa22.44■■□□□ 1.18
TMEFF1-201ENST00000374879 DPH5Q9H2P9 285 aa22.44■■□□□ 1.18
TMEFF1-201ENST00000374879 RPS6KL1Q9Y6S9 549 aa22.44■■□□□ 1.18
TMEFF1-201ENST00000374879 GOLGA6L10A0A0M3HER8 536 aa22.43■■□□□ 1.18
TMEFF1-201ENST00000374879 ZNF131P52739 623 aa22.43■■□□□ 1.18
TMEFF1-201ENST00000374879 ATP11AP98196 1134 aa22.43■■□□□ 1.18
TMEFF1-201ENST00000374879 BNIP1Q12981 228 aa22.43■■□□□ 1.18
TMEFF1-201ENST00000374879 CNBD1Q8NA66 436 aa22.43■■□□□ 1.18
TMEFF1-201ENST00000374879 PBKQ96KB5 322 aa22.43■■□□□ 1.18
TMEFF1-201ENST00000374879 MOV10L1Q9BXT6 1211 aaKnown RBP22.43■■□□□ 1.18
TMEFF1-201ENST00000374879 RAB17Q9H0T7 212 aa22.43■■□□□ 1.18
TMEFF1-201ENST00000374879 SEMA6BQ9H3T3 888 aa22.43■■□□□ 1.18
TMEFF1-201ENST00000374879 RGL1Q9NZL6 768 aa22.43■■□□□ 1.18
TMEFF1-201ENST00000374879 NUP98P52948 1817 aa22.43■■□□□ 1.18
TMEFF1-201ENST00000374879 TLDC2A0PJX2 215 aa22.43■■□□□ 1.18
TMEFF1-201ENST00000374879 SNX3O60493 162 aa22.43■■□□□ 1.18
TMEFF1-201ENST00000374879 ITGA4P13612 1032 aa22.43■■□□□ 1.18
TMEFF1-201ENST00000374879 LACTBP83111 547 aaPredicted RBP22.43■■□□□ 1.18
TMEFF1-201ENST00000374879 KIAA0753Q2KHM9 967 aa22.43■■□□□ 1.18
TMEFF1-201ENST00000374879 ARL6IP4Q66PJ3 421 aaKnown RBP22.43■■□□□ 1.18
TMEFF1-201ENST00000374879 SYT15Q9BQS2 421 aa22.43■■□□□ 1.18
TMEFF1-201ENST00000374879 NKX1-2Q9UD57 310 aaPredicted RBP22.43■■□□□ 1.18
TMEFF1-201ENST00000374879 PNMA3Q9UL41 463 aa22.43■■□□□ 1.18
TMEFF1-201ENST00000374879 C2CD2Q9Y426 696 aa22.43■■□□□ 1.18
TMEFF1-201ENST00000374879 ERVV-1B6SEH8 477 aa22.42■■□□□ 1.18
TMEFF1-201ENST00000374879 TTI1O43156 1089 aa22.42■■□□□ 1.18
TMEFF1-201ENST00000374879 TLR2O60603 784 aa22.42■■□□□ 1.18
TMEFF1-201ENST00000374879 RNF8O76064 485 aa22.42■■□□□ 1.18
TMEFF1-201ENST00000374879 PDHA1P08559 390 aa22.42■■□□□ 1.18
TMEFF1-201ENST00000374879 SLC5A1P13866 664 aa22.42■■□□□ 1.18
TMEFF1-201ENST00000374879 IFI35P80217 286 aaPredicted RBP22.42■■□□□ 1.18
TMEFF1-201ENST00000374879 CCDC84Q86UT8 332 aaPredicted RBP22.42■■□□□ 1.18
TMEFF1-201ENST00000374879 B4GALNT2Q8NHY0 566 aa22.42■■□□□ 1.18
TMEFF1-201ENST00000374879 CELF4Q9BZC1 486 aaKnown RBP22.42■■□□□ 1.18
TMEFF1-201ENST00000374879 TNKSO95271 1327 aa22.42■■□□□ 1.18
TMEFF1-201ENST00000374879 EIF3BP55884 814 aaKnown RBP22.42■■□□□ 1.18
TMEFF1-201ENST00000374879 SLC9C1Q4G0N8 1177 aa22.42■■□□□ 1.18
TMEFF1-201ENST00000374879 TBC1D5Q92609 795 aa22.42■■□□□ 1.18
TMEFF1-201ENST00000374879 ANKS1AQ92625 1134 aa22.42■■□□□ 1.18
TMEFF1-201ENST00000374879 ZMYND8Q9ULU4 1186 aaPredicted RBP22.42■■□□□ 1.18
TMEFF1-201ENST00000374879 SMIM23A6NLE4 172 aa22.41■■□□□ 1.18
TMEFF1-201ENST00000374879 SEC23AQ15436 765 aa22.41■■□□□ 1.18
TMEFF1-201ENST00000374879 NUGGCQ68CJ6 796 aa22.41■■□□□ 1.18
TMEFF1-201ENST00000374879 HOOK3Q86VS8 718 aa22.41■■□□□ 1.18
TMEFF1-201ENST00000374879 ZNF34Q8IZ26 560 aa22.41■■□□□ 1.18
TMEFF1-201ENST00000374879 ANKIB1Q9P2G1 1089 aa22.41■■□□□ 1.18
TMEFF1-201ENST00000374879 LRRC42Q9Y546 428 aa22.41■■□□□ 1.18
TMEFF1-201ENST00000374879 GPR75-ASB3A0A0A6YYF3 556 aa22.41■■□□□ 1.18
TMEFF1-201ENST00000374879 TRAPPC10P48553 1259 aa22.41■■□□□ 1.18
TMEFF1-201ENST00000374879 ACTRT1Q8TDG2 376 aa22.41■■□□□ 1.18
TMEFF1-201ENST00000374879 TRIM31Q9BZY9 425 aa22.41■■□□□ 1.18
TMEFF1-201ENST00000374879 ASB3Q9Y575 518 aa22.41■■□□□ 1.18
TMEFF1-201ENST00000374879 BAZ2BQ9UIF8 2168 aaKnown RBP22.4■■□□□ 1.18
TMEFF1-201ENST00000374879 KRIT1O00522 736 aa22.4■■□□□ 1.18
TMEFF1-201ENST00000374879 IL6STP40189 918 aaPredicted RBP22.4■■□□□ 1.18
TMEFF1-201ENST00000374879 NLRP5P59047 1200 aa22.4■■□□□ 1.18
TMEFF1-201ENST00000374879 ZNF526Q8TF50 670 aaPredicted RBP22.4■■□□□ 1.18
TMEFF1-201ENST00000374879 ZFAND2BQ8WV99 257 aa22.4■■□□□ 1.18
TMEFF1-201ENST00000374879 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.4■■□□□ 1.18
TMEFF1-201ENST00000374879 ZNF335Q9H4Z2 1342 aaPredicted RBP22.4■■□□□ 1.18
TMEFF1-201ENST00000374879 CES2O00748 559 aa22.4■■□□□ 1.18
TMEFF1-201ENST00000374879 NPTXRO95502 500 aa22.4■■□□□ 1.18
TMEFF1-201ENST00000374879 MYL1P05976 194 aa22.4■■□□□ 1.18
TMEFF1-201ENST00000374879 ADAM9Q13443 819 aa22.4■■□□□ 1.18
TMEFF1-201ENST00000374879 MAN2A1Q16706 1144 aa22.4■■□□□ 1.18
TMEFF1-201ENST00000374879 ASRGL1Q7L266 308 aa22.4■■□□□ 1.18
TMEFF1-201ENST00000374879 NSRP1Q9H0G5 558 aaKnown RBP22.4■■□□□ 1.18
TMEFF1-201ENST00000374879 EPB41L4BQ9H329 900 aa22.4■■□□□ 1.18
TMEFF1-201ENST00000374879 AZI2Q9H6S1 392 aa22.4■■□□□ 1.18
TMEFF1-201ENST00000374879 LMCD1Q9NZU5 365 aa22.4■■□□□ 1.18
TMEFF1-201ENST00000374879 NOC2LQ9Y3T9 749 aaKnown RBP22.4■■□□□ 1.18
TMEFF1-201ENST00000374879 USP15Q9Y4E8 981 aaPredicted RBP22.4■■□□□ 1.18
TMEFF1-201ENST00000374879 A0A087X0T9 212 aa22.39■■□□□ 1.18
TMEFF1-201ENST00000374879 PPFIA2O75334 1257 aa22.39■■□□□ 1.18
TMEFF1-201ENST00000374879 OAS1P00973 400 aaKnown RBP22.39■■□□□ 1.18
TMEFF1-201ENST00000374879 FAM228BP0C875 321 aa22.39■■□□□ 1.18
TMEFF1-201ENST00000374879 VEGFAP15692 232 aaPredicted RBP22.39■■□□□ 1.18
TMEFF1-201ENST00000374879 GNAZP19086 355 aa22.39■■□□□ 1.18
TMEFF1-201ENST00000374879 PCK1P35558 622 aa22.39■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms