RNA–Protein interactions for RNA: ENST00000374826.8

PMS1-202, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best) BASIC

Gene PMS1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-202ENST00000374826 PRSS53Q2L4Q9 553 aa6.61□□□□□ -1.35
PMS1-202ENST00000374826 CRIP3Q6Q6R5 217 aa6.61□□□□□ -1.35
PMS1-202ENST00000374826 DNERQ8NFT8 737 aa6.61□□□□□ -1.35
PMS1-202ENST00000374826 DIO2Q92813 273 aa6.61□□□□□ -1.35
PMS1-202ENST00000374826 CCDC140Q96MF4 163 aa6.61□□□□□ -1.35
PMS1-202ENST00000374826 YTHDC1Q96MU7 727 aaKnown RBP6.61□□□□□ -1.35
PMS1-202ENST00000374826 CDK5RAP1Q96SZ6 601 aaKnown RBP6.61□□□□□ -1.35
PMS1-202ENST00000374826 YIPF4Q9BSR8 244 aa6.61□□□□□ -1.35
PMS1-202ENST00000374826 MRIQ9BWK5 157 aa6.61□□□□□ -1.35
PMS1-202ENST00000374826 TMEM168Q9H0V1 697 aa6.61□□□□□ -1.35
PMS1-202ENST00000374826 L2HGDHQ9H9P8 463 aa6.61□□□□□ -1.35
PMS1-202ENST00000374826 TMEFF2Q9UIK5 374 aaPredicted RBP6.61□□□□□ -1.35
PMS1-202ENST00000374826 PLXNC1O60486 1568 aa6.61□□□□□ -1.35
PMS1-202ENST00000374826 REREQ9P2R6 1566 aa6.61□□□□□ -1.35
PMS1-202ENST00000374826 FGD6Q6ZV73 1430 aa6.6□□□□□ -1.35
PMS1-202ENST00000374826 CYR61O00622 381 aa6.6□□□□□ -1.35
PMS1-202ENST00000374826 SLPIP03973 132 aa6.6□□□□□ -1.35
PMS1-202ENST00000374826 GTF2A2P52657 109 aa6.6□□□□□ -1.35
PMS1-202ENST00000374826 MLLT6P55198 1093 aaPredicted RBP6.6□□□□□ -1.35
PMS1-202ENST00000374826 KCNAB2Q13303 367 aa6.6□□□□□ -1.35
PMS1-202ENST00000374826 CCDC103Q8IW40 242 aa6.6□□□□□ -1.35
PMS1-202ENST00000374826 PPIL6Q8IXY8 311 aa6.6□□□□□ -1.35
PMS1-202ENST00000374826 KREMEN2Q8NCW0 462 aa6.6□□□□□ -1.35
PMS1-202ENST00000374826 TOE1Q96GM8 510 aaKnown RBP6.6□□□□□ -1.35
PMS1-202ENST00000374826 TMEM169Q96HH4 297 aa6.6□□□□□ -1.35
PMS1-202ENST00000374826 CLTCQ00610 1675 aaKnown RBP6.6□□□□□ -1.35
PMS1-202ENST00000374826 TCOF1Q13428 1488 aaKnown RBP6.6□□□□□ -1.35
PMS1-202ENST00000374826 MAGI2Q86UL8 1455 aa6.6□□□□□ -1.35
PMS1-202ENST00000374826 MBD5Q9P267 1494 aa6.6□□□□□ -1.35
PMS1-202ENST00000374826 MLH3Q9UHC1 1453 aa6.6□□□□□ -1.35
PMS1-202ENST00000374826 MIA2Q96PC5 1412 aa6.59□□□□□ -1.35
PMS1-202ENST00000374826 KIAA1107Q9UPP5 1409 aa6.59□□□□□ -1.35
PMS1-202ENST00000374826 HGSO14964 777 aaPredicted RBP6.59□□□□□ -1.35
PMS1-202ENST00000374826 STK10O94804 968 aaKnown RBP6.59□□□□□ -1.35
PMS1-202ENST00000374826 HNRNPMP52272 730 aaKnown RBP eCLIP6.59□□□□□ -1.354e-6■■■■□ 23.6
PMS1-202ENST00000374826 EPHB4P54760 987 aa6.59□□□□□ -1.35
PMS1-202ENST00000374826 PPP2R2AP63151 447 aa6.59□□□□□ -1.35
PMS1-202ENST00000374826 ACBD5Q5T8D3 534 aaPredicted RBP6.59□□□□□ -1.35
PMS1-202ENST00000374826 PKN3Q6P5Z2 889 aa6.59□□□□□ -1.35
PMS1-202ENST00000374826 NLRP10Q86W26 655 aa6.59□□□□□ -1.35
PMS1-202ENST00000374826 CIR1Q86X95 450 aaPredicted RBP6.59□□□□□ -1.35
PMS1-202ENST00000374826 ZFPM1Q8IX07 1006 aa6.59□□□□□ -1.35
PMS1-202ENST00000374826 TMEM145Q8NBT3 493 aa6.59□□□□□ -1.35
PMS1-202ENST00000374826 ARRDC4Q8NCT1 418 aa6.59□□□□□ -1.35
PMS1-202ENST00000374826 IGDCC4Q8TDY8 1250 aa6.59□□□□□ -1.35
PMS1-202ENST00000374826 CLIC6Q96NY7 704 aa6.59□□□□□ -1.35
PMS1-202ENST00000374826 ZNF747Q9BV97 191 aa6.59□□□□□ -1.35
PMS1-202ENST00000374826 TRIM55Q9BYV6 548 aa6.59□□□□□ -1.35
PMS1-202ENST00000374826 ZNF652Q9Y2D9 606 aa6.59□□□□□ -1.35
PMS1-202ENST00000374826 C9orf84Q5VXU9 1444 aa6.59□□□□□ -1.36
PMS1-202ENST00000374826 C3P01024 1663 aa6.58□□□□□ -1.36
PMS1-202ENST00000374826 GCC2Q8IWJ2 1684 aa6.58□□□□□ -1.36
PMS1-202ENST00000374826 A0A1W2PQU0 124 aa6.58□□□□□ -1.36
PMS1-202ENST00000374826 MYO1BO43795 1136 aa6.58□□□□□ -1.36
PMS1-202ENST00000374826 TADA3O75528 432 aa6.58□□□□□ -1.36
PMS1-202ENST00000374826 CYP7B1O75881 506 aa6.58□□□□□ -1.36
PMS1-202ENST00000374826 GRIA2P42262 883 aa6.58□□□□□ -1.36
PMS1-202ENST00000374826 RAB33AQ14088 237 aa6.58□□□□□ -1.36
PMS1-202ENST00000374826 TESK1Q15569 626 aa6.58□□□□□ -1.36
PMS1-202ENST00000374826 ARHGEF18Q6ZSZ5 1173 aa6.58□□□□□ -1.36
PMS1-202ENST00000374826 AFAP1Q8N556 730 aa6.58□□□□□ -1.36
PMS1-202ENST00000374826 C1orf159Q96HA4 380 aa6.58□□□□□ -1.36
PMS1-202ENST00000374826 DEF6Q9H4E7 631 aa6.58□□□□□ -1.36
PMS1-202ENST00000374826 MROH2AA6NES4 1674 aa6.58□□□□□ -1.36
PMS1-202ENST00000374826 EIF2AK4Q9P2K8 1649 aaKnown RBP6.58□□□□□ -1.36
PMS1-202ENST00000374826 TCRBV5S2A0A599 114 aa6.57□□□□□ -1.36
PMS1-202ENST00000374826 B4GALT4O60513 344 aa6.57□□□□□ -1.36
PMS1-202ENST00000374826 FZD7O75084 574 aa6.57□□□□□ -1.36
PMS1-202ENST00000374826 AMHP03971 560 aa6.57□□□□□ -1.36
PMS1-202ENST00000374826 CAPNS1P04632 268 aa6.57□□□□□ -1.36
PMS1-202ENST00000374826 CHRNA2Q15822 529 aa6.57□□□□□ -1.36
PMS1-202ENST00000374826 SLC35F1Q5T1Q4 408 aa6.57□□□□□ -1.36
PMS1-202ENST00000374826 TEPPQ6URK8 271 aa6.57□□□□□ -1.36
PMS1-202ENST00000374826 KBTBD2Q8IY47 623 aa6.57□□□□□ -1.36
PMS1-202ENST00000374826 CKAP2LQ8IYA6 745 aa6.57□□□□□ -1.36
PMS1-202ENST00000374826 RCBTB1Q8NDN9 531 aa6.57□□□□□ -1.36
PMS1-202ENST00000374826 ZSWIM3Q96MP5 696 aa6.57□□□□□ -1.36
PMS1-202ENST00000374826 PTPN18Q99952 460 aa6.57□□□□□ -1.36
PMS1-202ENST00000374826 JADE2Q9NQC1 790 aa6.57□□□□□ -1.36
PMS1-202ENST00000374826 DTLQ9NZJ0 730 aa6.57□□□□□ -1.36
PMS1-202ENST00000374826 CROTQ9UKG9 612 aa6.57□□□□□ -1.36
PMS1-202ENST00000374826 COA3Q9Y2R0 106 aaPredicted RBP6.57□□□□□ -1.36
PMS1-202ENST00000374826 ATP10AO60312 1499 aa6.57□□□□□ -1.36
PMS1-202ENST00000374826 SHANK2Q9UPX8 1470 aa6.57□□□□□ -1.36
PMS1-202ENST00000374826 RNF17Q9BXT8 1623 aaKnown RBP6.57□□□□□ -1.36
PMS1-202ENST00000374826 SETD1BQ9UPS6 1966 aaKnown RBP6.57□□□□□ -1.36
PMS1-202ENST00000374826 SPAG9O60271 1321 aaKnown RBP6.56□□□□□ -1.36
PMS1-202ENST00000374826 H7BY64 318 aa6.56□□□□□ -1.36
PMS1-202ENST00000374826 OVOL3O00110 214 aa6.56□□□□□ -1.36
PMS1-202ENST00000374826 LRG1P02750 347 aa6.56□□□□□ -1.36
PMS1-202ENST00000374826 LTBRP36941 435 aa6.56□□□□□ -1.36
PMS1-202ENST00000374826 MAP4K2Q12851 820 aa6.56□□□□□ -1.36
PMS1-202ENST00000374826 HSP90AA2PQ14568 343 aaPredicted RBP6.56□□□□□ -1.36
PMS1-202ENST00000374826 STEAP3Q658P3 488 aa6.56□□□□□ -1.36
PMS1-202ENST00000374826 DENND5AQ6IQ26 1287 aa6.56□□□□□ -1.36
PMS1-202ENST00000374826 ZNF585AQ6P3V2 769 aa6.56□□□□□ -1.36
PMS1-202ENST00000374826 ZCCHC14Q8WYQ9 949 aaKnown RBP6.56□□□□□ -1.36
PMS1-202ENST00000374826 KCTD13Q8WZ19 329 aa6.56□□□□□ -1.36
PMS1-202ENST00000374826 SGSM3Q96HU1 749 aa6.56□□□□□ -1.36
PMS1-202ENST00000374826 WWC2-AS2Q96NR7 200 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms