RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 APAF1O14727 1248 aa6.12□□□□□ -1.43
USP48-202ENST00000374730 TBX1O43435 398 aa6.12□□□□□ -1.43
USP48-202ENST00000374730 NTRK1P04629 796 aa6.12□□□□□ -1.43
USP48-202ENST00000374730 SNRPB2P08579 225 aaKnown RBP6.12□□□□□ -1.43
USP48-202ENST00000374730 HSP90B1P14625 803 aaKnown RBP6.12□□□□□ -1.43
USP48-202ENST00000374730 CPS1P31327 1500 aa6.12□□□□□ -1.43
USP48-202ENST00000374730 MC3RP41968 323 aa6.12□□□□□ -1.43
USP48-202ENST00000374730 SLC6A11P48066 632 aa6.12□□□□□ -1.43
USP48-202ENST00000374730 RPL11P62913 178 aaKnown RBP6.12□□□□□ -1.43
USP48-202ENST00000374730 AKAP12Q02952 1782 aa6.12□□□□□ -1.43
USP48-202ENST00000374730 CACNB2Q08289 660 aaPredicted RBP6.12□□□□□ -1.43
USP48-202ENST00000374730 ITSN1Q15811 1721 aa6.12□□□□□ -1.43
USP48-202ENST00000374730 INF2Q27J81 1249 aa6.12□□□□□ -1.43
USP48-202ENST00000374730 VMACQ2NL98 169 aa6.12□□□□□ -1.43
USP48-202ENST00000374730 SAPCD2Q86UD0 394 aa6.12□□□□□ -1.43
USP48-202ENST00000374730 RIOX2Q8IUF8 465 aa6.12□□□□□ -1.43
USP48-202ENST00000374730 UBR1Q8IWV7 1749 aa6.12□□□□□ -1.43
USP48-202ENST00000374730 CCDC146Q8IYE0 955 aa6.12□□□□□ -1.43
USP48-202ENST00000374730 MICAL1Q8TDZ2 1067 aa6.12□□□□□ -1.43
USP48-202ENST00000374730 DIO2Q92813 273 aa6.12□□□□□ -1.43
USP48-202ENST00000374730 CFAP53Q96M91 514 aa6.12□□□□□ -1.43
USP48-202ENST00000374730 RIMS2Q9UQ26 1411 aa6.12□□□□□ -1.43
USP48-202ENST00000374730 TECPR2O15040 1411 aa6.11□□□□□ -1.43
USP48-202ENST00000374730 KDM2BQ8NHM5 1336 aa6.11□□□□□ -1.43
USP48-202ENST00000374730 SH3D21A4FU49 640 aa6.11□□□□□ -1.43
USP48-202ENST00000374730 B8ZZF3 427 aa6.11□□□□□ -1.43
USP48-202ENST00000374730 PRRG2O14669 202 aa6.11□□□□□ -1.43
USP48-202ENST00000374730 MEFVO15553 781 aaPredicted RBP6.11□□□□□ -1.43
USP48-202ENST00000374730 GJB6O95452 261 aa6.11□□□□□ -1.43
USP48-202ENST00000374730 DNAJA1P31689 397 aaKnown RBP6.11□□□□□ -1.43
USP48-202ENST00000374730 GFRA1P56159 465 aa6.11□□□□□ -1.43
USP48-202ENST00000374730 NFIXQ14938 502 aa6.11□□□□□ -1.43
USP48-202ENST00000374730 SLC10A6Q3KNW5 377 aa6.11□□□□□ -1.43
USP48-202ENST00000374730 MROH9Q5TGP6 573 aa6.11□□□□□ -1.43
USP48-202ENST00000374730 KREMEN2Q8NCW0 462 aa6.11□□□□□ -1.43
USP48-202ENST00000374730 SEC14L1Q92503 715 aa6.11□□□□□ -1.43
USP48-202ENST00000374730 RELTQ969Z4 430 aa6.11□□□□□ -1.43
USP48-202ENST00000374730 RUNDC1Q96C34 613 aa6.11□□□□□ -1.43
USP48-202ENST00000374730 AP5M1Q9H0R1 490 aa6.11□□□□□ -1.43
USP48-202ENST00000374730 PCDH18Q9HCL0 1135 aa6.11□□□□□ -1.43
USP48-202ENST00000374730 R3HCC1Q9Y3T6 440 aaKnown RBP6.11□□□□□ -1.43
USP48-202ENST00000374730 TIMM13Q9Y5L4 95 aaPredicted RBP6.11□□□□□ -1.43
USP48-202ENST00000374730 OTOL1A6NHN0 477 aaPredicted RBP6.1□□□□□ -1.43
USP48-202ENST00000374730 C22orf46C9J442 243 aa6.1□□□□□ -1.43
USP48-202ENST00000374730 AGRPO00253 132 aa6.1□□□□□ -1.43
USP48-202ENST00000374730 MYO1BO43795 1136 aa6.1□□□□□ -1.43
USP48-202ENST00000374730 PLIN1O60240 522 aa6.1□□□□□ -1.43
USP48-202ENST00000374730 CAPNS1P04632 268 aa6.1□□□□□ -1.43
USP48-202ENST00000374730 LIPIQ6XZB0 460 aa6.1□□□□□ -1.43
USP48-202ENST00000374730 CENPQQ7L2Z9 268 aaPredicted RBP6.1□□□□□ -1.43
USP48-202ENST00000374730 MIB1Q86YT6 1006 aa6.1□□□□□ -1.43
USP48-202ENST00000374730 CCDC103Q8IW40 242 aa6.1□□□□□ -1.43
USP48-202ENST00000374730 TEX2Q8IWB9 1127 aa6.1□□□□□ -1.43
USP48-202ENST00000374730 WDR63Q8IWG1 891 aa6.1□□□□□ -1.43
USP48-202ENST00000374730 SMARCC2Q8TAQ2 1214 aa6.1□□□□□ -1.43
USP48-202ENST00000374730 FEZF2Q8TBJ5 459 aa6.1□□□□□ -1.43
USP48-202ENST00000374730 BCAS3Q9H6U6 928 aa6.1□□□□□ -1.43
USP48-202ENST00000374730 X6R8D5 127 aa6.1□□□□□ -1.43
USP48-202ENST00000374730 MAP2P11137 1827 aaKnown RBP6.1□□□□□ -1.43
USP48-202ENST00000374730 C3P01024 1663 aa6.1□□□□□ -1.43
USP48-202ENST00000374730 TOPAZ1Q8N9V7 1692 aa6.1□□□□□ -1.43
USP48-202ENST00000374730 LMTK3Q96Q04 1460 aa6.09□□□□□ -1.43
USP48-202ENST00000374730 FAM135BQ49AJ0 1406 aa6.09□□□□□ -1.43
USP48-202ENST00000374730 LTBRP36941 435 aa6.09□□□□□ -1.43
USP48-202ENST00000374730 ECI1P42126 302 aa6.09□□□□□ -1.43
USP48-202ENST00000374730 MTHFSP49914 203 aa6.09□□□□□ -1.43
USP48-202ENST00000374730 SLURP1P55000 103 aa6.09□□□□□ -1.43
USP48-202ENST00000374730 DLX2Q07687 328 aaPredicted RBP6.09□□□□□ -1.43
USP48-202ENST00000374730 C20orf194Q5TEA3 1177 aa6.09□□□□□ -1.43
USP48-202ENST00000374730 ETV3LQ6ZN32 361 aa6.09□□□□□ -1.43
USP48-202ENST00000374730 NLRP10Q86W26 655 aa6.09□□□□□ -1.43
USP48-202ENST00000374730 PPIL6Q8IXY8 311 aa6.09□□□□□ -1.43
USP48-202ENST00000374730 CXorf38Q8TB03 319 aa6.09□□□□□ -1.43
USP48-202ENST00000374730 HNRNPLLQ8WVV9 542 aaKnown RBP6.09□□□□□ -1.43
USP48-202ENST00000374730 C1orf159Q96HA4 380 aa6.09□□□□□ -1.43
USP48-202ENST00000374730 TEPSINQ96N21 525 aa6.09□□□□□ -1.43
USP48-202ENST00000374730 PRAM1Q96QH2 718 aa6.09□□□□□ -1.43
USP48-202ENST00000374730 BTG4Q9NY30 223 aa6.09□□□□□ -1.43
USP48-202ENST00000374730 TERF2IPQ9NYB0 399 aa6.09□□□□□ -1.43
USP48-202ENST00000374730 TMEFF2Q9UIK5 374 aaPredicted RBP6.09□□□□□ -1.43
USP48-202ENST00000374730 SIT1Q9Y3P8 196 aa6.09□□□□□ -1.43
USP48-202ENST00000374730 PNPLA6Q8IY17 1366 aa6.08□□□□□ -1.44
USP48-202ENST00000374730 H7BY64 318 aa6.08□□□□□ -1.44
USP48-202ENST00000374730 ARNTLO00327 626 aa6.08□□□□□ -1.44
USP48-202ENST00000374730 SGSM2O43147 1006 aa6.08□□□□□ -1.44
USP48-202ENST00000374730 CYP2C8P10632 490 aa6.08□□□□□ -1.44
USP48-202ENST00000374730 SYN1P17600 705 aa6.08□□□□□ -1.44
USP48-202ENST00000374730 FPR2P25090 351 aa6.08□□□□□ -1.44
USP48-202ENST00000374730 ANP32AP39687 249 aaKnown RBP6.08□□□□□ -1.44
USP48-202ENST00000374730 KCNJ6P48051 423 aa6.08□□□□□ -1.44
USP48-202ENST00000374730 KCNC1P48547 511 aa6.08□□□□□ -1.44
USP48-202ENST00000374730 MAP4K2Q12851 820 aa6.08□□□□□ -1.44
USP48-202ENST00000374730 DDR2Q16832 855 aa6.08□□□□□ -1.44
USP48-202ENST00000374730 SLC35F1Q5T1Q4 408 aa6.08□□□□□ -1.44
USP48-202ENST00000374730 ANKS3Q6ZW76 656 aa6.08□□□□□ -1.44
USP48-202ENST00000374730 FRMD5Q7Z6J6 570 aa6.08□□□□□ -1.44
USP48-202ENST00000374730 TMEM145Q8NBT3 493 aa6.08□□□□□ -1.44
USP48-202ENST00000374730 TMEM169Q96HH4 297 aa6.08□□□□□ -1.44
USP48-202ENST00000374730 POGKQ9P215 609 aa6.08□□□□□ -1.44
USP48-202ENST00000374730 STK26Q9P289 416 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms