RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 RDM1Q8NG50 284 aa16.45■□□□□ 0.22
CDK5RAP3-201ENST00000338399 CCDC47Q96A33 483 aaKnown RBP16.45■□□□□ 0.22
CDK5RAP3-201ENST00000338399 ZSWIM4Q9H7M6 989 aa16.45■□□□□ 0.22
CDK5RAP3-201ENST00000338399 BMP2KQ9NSY1 1161 aaPredicted RBP16.45■□□□□ 0.22
CDK5RAP3-201ENST00000338399 PCDHA10Q9Y5I2 948 aa16.45■□□□□ 0.22
CDK5RAP3-201ENST00000338399 LOXHD1Q8IVV2 1947 aa16.45■□□□□ 0.22
CDK5RAP3-201ENST00000338399 NPHP3-ACAD11A0A0J9YXS1 232 aa16.44■□□□□ 0.22
CDK5RAP3-201ENST00000338399 TGFB3P10600 412 aa16.44■□□□□ 0.22
CDK5RAP3-201ENST00000338399 IDEP14735 1019 aa16.44■□□□□ 0.22
CDK5RAP3-201ENST00000338399 CD44P16070 742 aaKnown RBP16.44■□□□□ 0.22
CDK5RAP3-201ENST00000338399 LY6KQ17RY6 165 aa16.44■□□□□ 0.22
CDK5RAP3-201ENST00000338399 ARSHQ5FYA8 562 aa16.44■□□□□ 0.22
CDK5RAP3-201ENST00000338399 CNNM4Q6P4Q7 775 aa16.44■□□□□ 0.22
CDK5RAP3-201ENST00000338399 UNC13DQ70J99 1090 aa16.44■□□□□ 0.22
CDK5RAP3-201ENST00000338399 DNAJC19Q96DA6 116 aa16.44■□□□□ 0.22
CDK5RAP3-201ENST00000338399 EXOC1Q9NV70 894 aa16.44■□□□□ 0.22
CDK5RAP3-201ENST00000338399 GDAQ9Y2T3 454 aa16.44■□□□□ 0.22
CDK5RAP3-201ENST00000338399 ZNF236Q9UL36 1845 aa16.44■□□□□ 0.22
CDK5RAP3-201ENST00000338399 PVALEFA0A1B0GWK0 134 aa16.44■□□□□ 0.22
CDK5RAP3-201ENST00000338399 GOLGA6L19H0YKK7 550 aa16.44■□□□□ 0.22
CDK5RAP3-201ENST00000338399 ARIH2O95376 493 aa16.44■□□□□ 0.22
CDK5RAP3-201ENST00000338399 ACTR2P61160 394 aa16.44■□□□□ 0.22
CDK5RAP3-201ENST00000338399 RAD51AP2Q09MP3 1159 aa16.44■□□□□ 0.22
CDK5RAP3-201ENST00000338399 UGCGQ16739 394 aa16.44■□□□□ 0.22
CDK5RAP3-201ENST00000338399 ZNF467Q7Z7K2 595 aaPredicted RBP16.44■□□□□ 0.22
CDK5RAP3-201ENST00000338399 MAML3Q96JK9 1138 aa16.44■□□□□ 0.22
CDK5RAP3-201ENST00000338399 DIS3Q9Y2L1 958 aaKnown RBP16.44■□□□□ 0.22
CDK5RAP3-201ENST00000338399 PPP1R3GB7ZBB8 358 aa16.43■□□□□ 0.22
CDK5RAP3-201ENST00000338399 KRT18P05783 430 aaKnown RBP16.43■□□□□ 0.22
CDK5RAP3-201ENST00000338399 PSAPP07602 524 aa16.43■□□□□ 0.22
CDK5RAP3-201ENST00000338399 PSMC5P62195 406 aa16.43■□□□□ 0.22
CDK5RAP3-201ENST00000338399 CACNB1Q02641 598 aaPredicted RBP16.43■□□□□ 0.22
CDK5RAP3-201ENST00000338399 NEDD9Q14511 834 aa16.43■□□□□ 0.22
CDK5RAP3-201ENST00000338399 MORN1Q5T089 497 aa16.43■□□□□ 0.22
CDK5RAP3-201ENST00000338399 KLHL10Q6JEL2 608 aa16.43■□□□□ 0.22
CDK5RAP3-201ENST00000338399 KCNV1Q6PIU1 500 aa16.43■□□□□ 0.22
CDK5RAP3-201ENST00000338399 GIMAP8Q8ND71 665 aaPredicted RBP16.43■□□□□ 0.22
CDK5RAP3-201ENST00000338399 NPLOC4Q8TAT6 608 aa16.43■□□□□ 0.22
CDK5RAP3-201ENST00000338399 PDGFCQ9NRA1 345 aa16.43■□□□□ 0.22
CDK5RAP3-201ENST00000338399 DDX41Q9UJV9 622 aaKnown RBP16.43■□□□□ 0.22
CDK5RAP3-201ENST00000338399 MYH9P35579 1960 aaKnown RBP16.43■□□□□ 0.22
CDK5RAP3-201ENST00000338399 FARP2O94887 1054 aaPredicted RBP16.42■□□□□ 0.22
CDK5RAP3-201ENST00000338399 GGPS1O95749 300 aa16.42■□□□□ 0.22
CDK5RAP3-201ENST00000338399 PLCB2Q00722 1185 aa16.42■□□□□ 0.22
CDK5RAP3-201ENST00000338399 SWSAP1Q6NVH7 229 aa16.42■□□□□ 0.22
CDK5RAP3-201ENST00000338399 ABHD15Q6UXT9 468 aa16.42■□□□□ 0.22
CDK5RAP3-201ENST00000338399 HPS3Q969F9 1004 aa16.42■□□□□ 0.22
CDK5RAP3-201ENST00000338399 RUSC1Q9BVN2 902 aa16.42■□□□□ 0.22
CDK5RAP3-201ENST00000338399 PANK4Q9NVE7 773 aa16.42■□□□□ 0.22
CDK5RAP3-201ENST00000338399 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.42■□□□□ 0.22
CDK5RAP3-201ENST00000338399 GABBR1Q9UBS5 961 aa16.42■□□□□ 0.22
CDK5RAP3-201ENST00000338399 MAPK8IP1Q9UQF2 711 aa16.42■□□□□ 0.22
CDK5RAP3-201ENST00000338399 SMTNL1A8MU46 457 aa16.42■□□□□ 0.22
CDK5RAP3-201ENST00000338399 MGAMO43451 1857 aa16.42■□□□□ 0.22
CDK5RAP3-201ENST00000338399 LYPLA2O95372 231 aa16.42■□□□□ 0.22
CDK5RAP3-201ENST00000338399 ALDH1A1P00352 501 aa16.42■□□□□ 0.22
CDK5RAP3-201ENST00000338399 PRCPP42785 496 aa16.42■□□□□ 0.22
CDK5RAP3-201ENST00000338399 STK4Q13043 487 aa16.42■□□□□ 0.22
CDK5RAP3-201ENST00000338399 MAP2K5Q13163 448 aa16.42■□□□□ 0.22
CDK5RAP3-201ENST00000338399 NCAPHQ15003 741 aa16.42■□□□□ 0.22
CDK5RAP3-201ENST00000338399 RINT1Q6NUQ1 792 aa16.42■□□□□ 0.22
CDK5RAP3-201ENST00000338399 MIS18BP1Q6P0N0 1132 aa16.42■□□□□ 0.22
CDK5RAP3-201ENST00000338399 MAMDC4Q6UXC1 1216 aa16.42■□□□□ 0.22
CDK5RAP3-201ENST00000338399 TRMT1LQ7Z2T5 733 aaKnown RBP16.42■□□□□ 0.22
CDK5RAP3-201ENST00000338399 C4orf19Q8IY42 314 aa16.42■□□□□ 0.22
CDK5RAP3-201ENST00000338399 MLXIPQ9HAP2 919 aa16.42■□□□□ 0.22
CDK5RAP3-201ENST00000338399 SLC5A4Q9NY91 659 aa16.42■□□□□ 0.22
CDK5RAP3-201ENST00000338399 SYNGAP1Q96PV0 1343 aa16.41■□□□□ 0.22
CDK5RAP3-201ENST00000338399 IKBKBO14920 756 aa16.41■□□□□ 0.22
CDK5RAP3-201ENST00000338399 ATG7O95352 703 aa16.41■□□□□ 0.22
CDK5RAP3-201ENST00000338399 SNAI1O95863 264 aaPredicted RBP16.41■□□□□ 0.22
CDK5RAP3-201ENST00000338399 SUPT20HL2P0C7V6 817 aa16.41■□□□□ 0.22
CDK5RAP3-201ENST00000338399 ERCC5P28715 1186 aaPredicted RBP16.41■□□□□ 0.22
CDK5RAP3-201ENST00000338399 YWHABP31946 246 aaKnown RBP16.41■□□□□ 0.22
CDK5RAP3-201ENST00000338399 MYL5Q02045 173 aa16.41■□□□□ 0.22
CDK5RAP3-201ENST00000338399 COASYQ13057 564 aa16.41■□□□□ 0.22
CDK5RAP3-201ENST00000338399 GIT2Q14161 759 aa16.41■□□□□ 0.22
CDK5RAP3-201ENST00000338399 TTLL4Q14679 1199 aa16.41■□□□□ 0.22
CDK5RAP3-201ENST00000338399 CT47A1Q5JQC4 288 aaPredicted RBP16.41■□□□□ 0.22
CDK5RAP3-201ENST00000338399 CCDC62Q6P9F0 684 aa16.41■□□□□ 0.22
CDK5RAP3-201ENST00000338399 CCDC60Q8IWA6 550 aaPredicted RBP16.41■□□□□ 0.22
CDK5RAP3-201ENST00000338399 CCDC65Q8IXS2 484 aa16.41■□□□□ 0.22
CDK5RAP3-201ENST00000338399 TRMT44Q8IYL2 757 aaKnown RBP16.41■□□□□ 0.22
CDK5RAP3-201ENST00000338399 SCFD2Q8WU76 684 aa16.41■□□□□ 0.22
CDK5RAP3-201ENST00000338399 ANP32BQ92688 251 aaKnown RBP16.41■□□□□ 0.22
CDK5RAP3-201ENST00000338399 REEP2Q9BRK0 252 aa16.41■□□□□ 0.22
CDK5RAP3-201ENST00000338399 TINF2Q9BSI4 451 aa16.41■□□□□ 0.22
CDK5RAP3-201ENST00000338399 VTA1Q9NP79 307 aa16.41■□□□□ 0.22
CDK5RAP3-201ENST00000338399 SLC39A2Q9NP94 309 aa16.41■□□□□ 0.22
CDK5RAP3-201ENST00000338399 ARHGEF35A5YM69 484 aa16.4■□□□□ 0.22
CDK5RAP3-201ENST00000338399 BACH1O14867 736 aa16.4■□□□□ 0.22
CDK5RAP3-201ENST00000338399 AP5Z1O43299 807 aa16.4■□□□□ 0.22
CDK5RAP3-201ENST00000338399 TXNP10599 105 aaKnown RBP16.4■□□□□ 0.22
CDK5RAP3-201ENST00000338399 STX17P56962 302 aa16.4■□□□□ 0.22
CDK5RAP3-201ENST00000338399 TMEM63BQ5T3F8 832 aa16.4■□□□□ 0.22
CDK5RAP3-201ENST00000338399 TAPT1Q6NXT6 567 aa16.4■□□□□ 0.22
CDK5RAP3-201ENST00000338399 METTL7BQ6UX53 244 aa16.4■□□□□ 0.22
CDK5RAP3-201ENST00000338399 C1orf186Q6ZWK4 172 aa16.4■□□□□ 0.22
CDK5RAP3-201ENST00000338399 COPS5Q92905 334 aa16.4■□□□□ 0.22
CDK5RAP3-201ENST00000338399 MED15Q96RN5 788 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms