RNA–Protein interactions for RNA: ENST00000323926.10

FN1-201, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-201ENST00000323926 GTF2IP78347 998 aa13.58□□□□□ -0.24
FN1-201ENST00000323926 APOBEC3FQ8IUX4 373 aaKnown RBP13.58□□□□□ -0.24
FN1-201ENST00000323926 RAB42Q8N4Z0 105 aa13.58□□□□□ -0.24
FN1-201ENST00000323926 KDM4CQ9H3R0 1056 aa13.58□□□□□ -0.24
FN1-201ENST00000323926 DLC1Q96QB1 1528 aa13.58□□□□□ -0.24
FN1-201ENST00000323926 ABCB4P21439 1286 aa13.57□□□□□ -0.24
FN1-201ENST00000323926 IFRD2Q12894 506 aaPredicted RBP13.57□□□□□ -0.24
FN1-201ENST00000323926 CRLF3Q8IUI8 442 aa13.57□□□□□ -0.24
FN1-201ENST00000323926 SIX6OS1Q8N1H7 587 aa13.57□□□□□ -0.24
FN1-201ENST00000323926 RIPOR2Q9Y4F9 1068 aa13.57□□□□□ -0.24
FN1-201ENST00000323926 CLGNO14967 610 aa13.57□□□□□ -0.24
FN1-201ENST00000323926 KRT7P08729 469 aa13.57□□□□□ -0.24
FN1-201ENST00000323926 BMP3P12645 472 aa13.57□□□□□ -0.24
FN1-201ENST00000323926 ILF2Q12905 390 aaKnown RBP13.57□□□□□ -0.24
FN1-201ENST00000323926 ART3Q13508 389 aa13.57□□□□□ -0.24
FN1-201ENST00000323926 TDRD7Q8NHU6 1098 aaKnown RBP13.57□□□□□ -0.24
FN1-201ENST00000323926 TBC1D7Q9P0N9 293 aa13.57□□□□□ -0.24
FN1-201ENST00000323926 IFNAR1P17181 557 aa13.57□□□□□ -0.24
FN1-201ENST00000323926 LRRC8BQ6P9F7 803 aa13.57□□□□□ -0.24
FN1-201ENST00000323926 SRPRBQ9Y5M8 271 aaKnown RBP13.57□□□□□ -0.24
FN1-201ENST00000323926 SLFN14P0C7P3 912 aa13.57□□□□□ -0.24
FN1-201ENST00000323926 TMEM179Q6ZVK1 233 aa13.57□□□□□ -0.24
FN1-201ENST00000323926 MAP4K1Q92918 833 aa13.57□□□□□ -0.24
FN1-201ENST00000323926 SUN2Q9UH99 717 aa13.57□□□□□ -0.24
FN1-201ENST00000323926 CTDSPL2Q05D32 466 aa13.57□□□□□ -0.24
FN1-201ENST00000323926 ENOX1Q8TC92 643 aaKnown RBP13.57□□□□□ -0.24
FN1-201ENST00000323926 USP44Q9H0E7 712 aa13.57□□□□□ -0.24
FN1-201ENST00000323926 KRT38O76015 456 aa13.57□□□□□ -0.24
FN1-201ENST00000323926 GRM1Q13255 1194 aa13.57□□□□□ -0.24
FN1-201ENST00000323926 MIGA2Q7L4E1 593 aa13.57□□□□□ -0.24
FN1-201ENST00000323926 NPHP4O75161 1426 aaPredicted RBP13.57□□□□□ -0.24
FN1-201ENST00000323926 ABCA6Q8N139 1617 aa13.57□□□□□ -0.24
FN1-201ENST00000323926 LOC102724428A0A0B4J2F2 783 aa13.57□□□□□ -0.24
FN1-201ENST00000323926 PRPF3O43395 683 aaKnown RBP13.57□□□□□ -0.24
FN1-201ENST00000323926 MMP1P03956 469 aa13.57□□□□□ -0.24
FN1-201ENST00000323926 ALAS1P13196 640 aa13.57□□□□□ -0.24
FN1-201ENST00000323926 SIK1P57059 783 aa13.57□□□□□ -0.24
FN1-201ENST00000323926 IRX5P78411 483 aaPredicted RBP13.57□□□□□ -0.24
FN1-201ENST00000323926 DIXDC1Q155Q3 683 aa13.57□□□□□ -0.24
FN1-201ENST00000323926 RNF207Q6ZRF8 634 aa13.57□□□□□ -0.24
FN1-201ENST00000323926 GPBP1L1Q9HC44 474 aaPredicted RBP13.57□□□□□ -0.24
FN1-201ENST00000323926 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.57□□□□□ -0.24
FN1-201ENST00000323926 FARP1Q9Y4F1 1045 aaPredicted RBP13.57□□□□□ -0.24
FN1-201ENST00000323926 FMN2Q9NZ56 1722 aa13.57□□□□□ -0.24
FN1-201ENST00000323926 TBC1D22BQ9NU19 505 aa13.56□□□□□ -0.24
FN1-201ENST00000323926 MED21Q13503 144 aa13.56□□□□□ -0.24
FN1-201ENST00000323926 DNAAF3Q8N9W5 541 aa13.56□□□□□ -0.24
FN1-201ENST00000323926 NLRC4Q9NPP4 1024 aa13.56□□□□□ -0.24
FN1-201ENST00000323926 TULP4Q9NRJ4 1543 aa13.56□□□□□ -0.24
FN1-201ENST00000323926 USP17L3A6NCW0 530 aa13.56□□□□□ -0.24
FN1-201ENST00000323926 USP17L4A6NCW7 530 aa13.56□□□□□ -0.24
FN1-201ENST00000323926 TMTC4Q5T4D3 741 aa13.56□□□□□ -0.24
FN1-201ENST00000323926 USP17L1Q7RTZ2 530 aa13.56□□□□□ -0.24
FN1-201ENST00000323926 TMCO5AQ8N6Q1 288 aa13.56□□□□□ -0.24
FN1-201ENST00000323926 ZNF496Q96IT1 587 aaPredicted RBP13.56□□□□□ -0.24
FN1-201ENST00000323926 HOXD10P28358 340 aa13.56□□□□□ -0.24
FN1-201ENST00000323926 SCYL2Q6P3W7 929 aa13.56□□□□□ -0.24
FN1-201ENST00000323926 PDCD7Q8N8D1 485 aaKnown RBP13.56□□□□□ -0.24
FN1-201ENST00000323926 SCOCQ9UIL1 159 aa13.56□□□□□ -0.24
FN1-201ENST00000323926 GNGT2O14610 69 aa13.56□□□□□ -0.24
FN1-201ENST00000323926 TTBK2Q6IQ55 1244 aa13.56□□□□□ -0.24
FN1-201ENST00000323926 FBXL13Q8NEE6 735 aa13.56□□□□□ -0.24
FN1-201ENST00000323926 COA1Q9GZY4 146 aa13.56□□□□□ -0.24
FN1-201ENST00000323926 KCND2Q9NZV8 630 aa13.56□□□□□ -0.24
FN1-201ENST00000323926 PNMA6EA0A0J9YXQ4 647 aa13.56□□□□□ -0.24
FN1-201ENST00000323926 EIF2B5Q13144 721 aaKnown RBP13.56□□□□□ -0.24
FN1-201ENST00000323926 FAM47CQ5HY64 1035 aa13.56□□□□□ -0.24
FN1-201ENST00000323926 CFAP61Q8NHU2 1237 aa13.56□□□□□ -0.24
FN1-201ENST00000323926 AKAP12Q02952 1782 aa13.56□□□□□ -0.24
FN1-201ENST00000323926 NCKAP5LQ9HCH0 1330 aa13.56□□□□□ -0.24
FN1-201ENST00000323926 PIP4K2CQ8TBX8 421 aa13.56□□□□□ -0.24
FN1-201ENST00000323926 KIF9Q9HAQ2 790 aa13.56□□□□□ -0.24
FN1-201ENST00000323926 STXBP3O00186 592 aa13.55□□□□□ -0.24
FN1-201ENST00000323926 ASAP2O43150 1006 aa13.55□□□□□ -0.24
FN1-201ENST00000323926 BTDP43251 543 aa13.55□□□□□ -0.24
FN1-201ENST00000323926 URGCPQ8TCY9 931 aa13.55□□□□□ -0.24
FN1-201ENST00000323926 TRIM4Q9C037 500 aa13.55□□□□□ -0.24
FN1-201ENST00000323926 POLR2FP61218 127 aaKnown RBP13.55□□□□□ -0.24
FN1-201ENST00000323926 GRID2IPA4D2P6 1211 aa13.55□□□□□ -0.24
FN1-201ENST00000323926 MXI1P50539 228 aa13.55□□□□□ -0.24
FN1-201ENST00000323926 YWHAGP61981 247 aaKnown RBP eCLIP13.55□□□□□ -0.24
FN1-201ENST00000323926 SYDE1Q6ZW31 735 aaPredicted RBP13.55□□□□□ -0.24
FN1-201ENST00000323926 APOA4P06727 396 aa13.55□□□□□ -0.24
FN1-201ENST00000323926 BCAS4Q8TDM0 211 aa13.55□□□□□ -0.24
FN1-201ENST00000323926 HOXC10Q9NYD6 342 aa13.55□□□□□ -0.24
FN1-201ENST00000323926 KPNA7A9QM74 516 aa13.55□□□□□ -0.24
FN1-201ENST00000323926 RECQLP46063 649 aaPredicted RBP13.55□□□□□ -0.24
FN1-201ENST00000323926 ZNF653Q96CK0 615 aa13.55□□□□□ -0.24
FN1-201ENST00000323926 BAIAP2L1Q9UHR4 511 aa13.55□□□□□ -0.24
FN1-201ENST00000323926 PHKA2P46019 1235 aa13.55□□□□□ -0.24
FN1-201ENST00000323926 LRRC31Q6UY01 552 aa13.55□□□□□ -0.24
FN1-201ENST00000323926 SPDL1Q96EA4 605 aa13.55□□□□□ -0.24
FN1-201ENST00000323926 FAM20AQ96MK3 541 aa13.55□□□□□ -0.24
FN1-201ENST00000323926 ACAP3Q96P50 834 aa13.55□□□□□ -0.24
FN1-201ENST00000323926 CCDC78A2IDD5 438 aa13.55□□□□□ -0.24
FN1-201ENST00000323926 PDIA3P30101 505 aaKnown RBP13.55□□□□□ -0.24
FN1-201ENST00000323926 SNRPFP62306 86 aaKnown RBP13.55□□□□□ -0.24
FN1-201ENST00000323926 ATP6V1E2Q96A05 226 aa13.55□□□□□ -0.24
FN1-201ENST00000323926 HEG1Q9ULI3 1381 aa13.54□□□□□ -0.24
FN1-201ENST00000323926 K7ERI5 159 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms