RNA–Protein interactions for RNA: ENST00000321442.9

SFXN1-201, Transcript of sideroflexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFXN1, Length 4,231 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-201ENST00000321442 TMEM51Q9NW97 253 aa17.84■□□□□ 0.45
SFXN1-201ENST00000321442 STK4Q13043 487 aa17.84■□□□□ 0.45
SFXN1-201ENST00000321442 CCDC13Q8IYE1 715 aa17.84■□□□□ 0.45
SFXN1-201ENST00000321442 CNKSR2Q8WXI2 1034 aa17.84■□□□□ 0.45
SFXN1-201ENST00000321442 SHPRHQ149N8 1683 aa17.84■□□□□ 0.45
SFXN1-201ENST00000321442 RNF10Q8N5U6 811 aaKnown RBP17.83■□□□□ 0.45
SFXN1-201ENST00000321442 METTL14Q9HCE5 456 aaKnown RBP17.83■□□□□ 0.45
SFXN1-201ENST00000321442 FAM114A2Q9NRY5 505 aa17.83■□□□□ 0.45
SFXN1-201ENST00000321442 LRRC4BQ9NT99 713 aa17.83■□□□□ 0.45
SFXN1-201ENST00000321442 STK17AQ9UEE5 414 aa17.83■□□□□ 0.45
SFXN1-201ENST00000321442 PARP2Q9UGN5 583 aa17.83■□□□□ 0.45
SFXN1-201ENST00000321442 AGTPBP1Q9UPW5 1226 aa17.83■□□□□ 0.45
SFXN1-201ENST00000321442 TESPA1A2RU30 521 aaPredicted RBP17.83■□□□□ 0.45
SFXN1-201ENST00000321442 SFI1A8K8P3 1242 aa17.83■□□□□ 0.45
SFXN1-201ENST00000321442 PRPF6O94906 941 aaKnown RBP17.83■□□□□ 0.45
SFXN1-201ENST00000321442 AFPP02771 609 aaKnown RBP17.83■□□□□ 0.45
SFXN1-201ENST00000321442 FYB2Q5VWT5 728 aa17.83■□□□□ 0.45
SFXN1-201ENST00000321442 CYP4F22Q6NT55 531 aa17.83■□□□□ 0.45
SFXN1-201ENST00000321442 ADGRB2O60241 1585 aa17.83■□□□□ 0.45
SFXN1-201ENST00000321442 TCHHQ07283 1943 aa17.83■□□□□ 0.44
SFXN1-201ENST00000321442 SUN1O94901 812 aa17.83■□□□□ 0.44
SFXN1-201ENST00000321442 TSNAXIP1Q2TAA8 658 aa17.83■□□□□ 0.44
SFXN1-201ENST00000321442 ANKRD20A3Q5VUR7 823 aa17.83■□□□□ 0.44
SFXN1-201ENST00000321442 GCNT4Q9P109 453 aa17.83■□□□□ 0.44
SFXN1-201ENST00000321442 TTLL1O95922 423 aa17.83■□□□□ 0.44
SFXN1-201ENST00000321442 PPP2R5AQ15172 486 aa17.83■□□□□ 0.44
SFXN1-201ENST00000321442 DALRD3Q5D0E6 543 aaKnown RBP17.83■□□□□ 0.44
SFXN1-201ENST00000321442 RC3H1Q5TC82 1133 aaKnown RBP17.83■□□□□ 0.44
SFXN1-201ENST00000321442 LCMT1Q9UIC8 334 aa17.83■□□□□ 0.44
SFXN1-201ENST00000321442 POC1B-GALNT4F8VUJ3 575 aa17.82■□□□□ 0.44
SFXN1-201ENST00000321442 GAS7O60861 476 aa17.82■□□□□ 0.44
SFXN1-201ENST00000321442 TRIP13Q15645 432 aaPredicted RBP17.82■□□□□ 0.44
SFXN1-201ENST00000321442 WDR44Q5JSH3 913 aa17.82■□□□□ 0.44
SFXN1-201ENST00000321442 BZW2Q9Y6E2 419 aaKnown RBP17.82■□□□□ 0.44
SFXN1-201ENST00000321442 EIF4E1BA6NMX2 242 aaKnown RBP17.82■□□□□ 0.44
SFXN1-201ENST00000321442 AKR1B1P15121 316 aa17.82■□□□□ 0.44
SFXN1-201ENST00000321442 TOB1P50616 345 aaPredicted RBP17.82■□□□□ 0.44
SFXN1-201ENST00000321442 LRRC63Q05C16 580 aa17.82■□□□□ 0.44
SFXN1-201ENST00000321442 PPP2R5EQ16537 467 aa17.82■□□□□ 0.44
SFXN1-201ENST00000321442 NEK9Q8TD19 979 aa17.82■□□□□ 0.44
SFXN1-201ENST00000321442 HNRNPLLQ8WVV9 542 aaKnown RBP17.82■□□□□ 0.44
SFXN1-201ENST00000321442 LACRTQ9GZZ8 138 aa17.82■□□□□ 0.44
SFXN1-201ENST00000321442 PSD3Q9NYI0 1048 aa17.82■□□□□ 0.44
SFXN1-201ENST00000321442 CPSF2Q9P2I0 782 aaKnown RBP17.82■□□□□ 0.44
SFXN1-201ENST00000321442 IFT172Q9UG01 1749 aa17.82■□□□□ 0.44
SFXN1-201ENST00000321442 ODR4Q5SWX8 454 aa17.82■□□□□ 0.44
SFXN1-201ENST00000321442 FOXR1Q6PIV2 292 aa17.82■□□□□ 0.44
SFXN1-201ENST00000321442 NLRP14Q86W24 1093 aa17.82■□□□□ 0.44
SFXN1-201ENST00000321442 ADSSL1Q8N142 457 aa17.82■□□□□ 0.44
SFXN1-201ENST00000321442 A0A1W2PQC6 194 aa17.81■□□□□ 0.44
SFXN1-201ENST00000321442 PPP1R3GB7ZBB8 358 aa17.81■□□□□ 0.44
SFXN1-201ENST00000321442 CARSP49589 748 aaKnown RBP17.81■□□□□ 0.44
SFXN1-201ENST00000321442 LRRC31Q6UY01 552 aa17.81■□□□□ 0.44
SFXN1-201ENST00000321442 PHLDB2Q86SQ0 1253 aa17.81■□□□□ 0.44
SFXN1-201ENST00000321442 FBXO11Q86XK2 927 aa17.81■□□□□ 0.44
SFXN1-201ENST00000321442 GDAP1Q8TB36 358 aa17.81■□□□□ 0.44
SFXN1-201ENST00000321442 CEP63Q96MT8 703 aa17.81■□□□□ 0.44
SFXN1-201ENST00000321442 GLT8D2Q9H1C3 349 aa17.81■□□□□ 0.44
SFXN1-201ENST00000321442 POLLQ9UGP5 575 aa17.81■□□□□ 0.44
SFXN1-201ENST00000321442 A0A0U1RQJ8 604 aa17.81■□□□□ 0.44
SFXN1-201ENST00000321442 USP17L15C9J2P7 530 aa17.81■□□□□ 0.44
SFXN1-201ENST00000321442 USP17L13C9JLJ4 530 aa17.81■□□□□ 0.44
SFXN1-201ENST00000321442 USP17L11C9JVI0 530 aa17.81■□□□□ 0.44
SFXN1-201ENST00000321442 USP17L18D6R9N7 530 aa17.81■□□□□ 0.44
SFXN1-201ENST00000321442 USP17L22D6RA61 530 aa17.81■□□□□ 0.44
SFXN1-201ENST00000321442 USP17L17D6RBQ6 530 aa17.81■□□□□ 0.44
SFXN1-201ENST00000321442 USP17L19D6RCP7 530 aa17.81■□□□□ 0.44
SFXN1-201ENST00000321442 USP17L20D6RJB6 530 aa17.81■□□□□ 0.44
SFXN1-201ENST00000321442 ACSL3O95573 720 aa17.81■□□□□ 0.44
SFXN1-201ENST00000321442 PLEKP08567 350 aaPredicted RBP17.81■□□□□ 0.44
SFXN1-201ENST00000321442 SLURP2P0DP57 97 aa17.81■□□□□ 0.44
SFXN1-201ENST00000321442 USP17L24Q0WX57 530 aa17.81■□□□□ 0.44
SFXN1-201ENST00000321442 ZNF211Q13398 564 aaPredicted RBP17.81■□□□□ 0.44
SFXN1-201ENST00000321442 NUGGCQ68CJ6 796 aa17.81■□□□□ 0.44
SFXN1-201ENST00000321442 DCUN1D2Q6PH85 259 aa17.81■□□□□ 0.44
SFXN1-201ENST00000321442 USP17L6PQ6QN14 398 aa17.81■□□□□ 0.44
SFXN1-201ENST00000321442 OR2W6PQ8NHA6 318 aa17.81■□□□□ 0.44
SFXN1-201ENST00000321442 DMGDHQ9UI17 866 aaKnown RBP17.81■□□□□ 0.44
SFXN1-201ENST00000321442 GMNCA6NCL1 334 aa17.81■□□□□ 0.44
SFXN1-201ENST00000321442 PPP1R37O75864 691 aa17.81■□□□□ 0.44
SFXN1-201ENST00000321442 PLA2G4BP0C869 781 aa17.81■□□□□ 0.44
SFXN1-201ENST00000321442 FAM186BQ8IYM0 893 aa17.81■□□□□ 0.44
SFXN1-201ENST00000321442 ANKZF1Q9H8Y5 726 aa17.81■□□□□ 0.44
SFXN1-201ENST00000321442 RBM12Q9NTZ6 932 aaKnown RBP17.81■□□□□ 0.44
SFXN1-201ENST00000321442 PI4KBQ9UBF8 816 aa17.81■□□□□ 0.44
SFXN1-201ENST00000321442 AMACRQ9UHK6 382 aa17.81■□□□□ 0.44
SFXN1-201ENST00000321442 RSRC2Q7L4I2 434 aaKnown RBP17.8■□□□□ 0.44
SFXN1-201ENST00000321442 PBKQ96KB5 322 aa17.8■□□□□ 0.44
SFXN1-201ENST00000321442 TMEM260Q9NX78 707 aa17.8■□□□□ 0.44
SFXN1-201ENST00000321442 ATP2A2P16615 1042 aaKnown RBP17.8■□□□□ 0.44
SFXN1-201ENST00000321442 UNC13DQ70J99 1090 aa17.8■□□□□ 0.44
SFXN1-201ENST00000321442 MAP3K14Q99558 947 aa17.8■□□□□ 0.44
SFXN1-201ENST00000321442 GOLPH3Q9H4A6 298 aa17.8■□□□□ 0.44
SFXN1-201ENST00000321442 PIM2Q9P1W9 311 aa17.8■□□□□ 0.44
SFXN1-201ENST00000321442 DAGLAQ9Y4D2 1042 aa17.8■□□□□ 0.44
SFXN1-201ENST00000321442 PXDNLA1KZ92 1463 aa17.8■□□□□ 0.44
SFXN1-201ENST00000321442 TARSL2A2RTX5 802 aaKnown RBP17.8■□□□□ 0.44
SFXN1-201ENST00000321442 RASGRF2O14827 1237 aa17.8■□□□□ 0.44
SFXN1-201ENST00000321442 MUM1Q2TAK8 710 aa17.8■□□□□ 0.44
SFXN1-201ENST00000321442 DGKHQ86XP1 1220 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms