RNA–Protein interactions for RNA: YMR153W

NUP53, Transcript of FG-nucleoporin component of central core of nuclear pore complex (NPC), yeastyeast

Gene NUP53, Length 1,428 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP53YMR153W YKL033W-AQ86ZR7 236 aa7.12□□□□□ -1.27
NUP53YMR153W YPT6Q99260 215 aa7.12□□□□□ -1.27
NUP53YMR153W YPR096CO13587 100 aa7.11□□□□□ -1.27
NUP53YMR153W CBP2P03874 630 aaPredicted RBP7.11□□□□□ -1.27
NUP53YMR153W ARG81P05085 880 aa7.11□□□□□ -1.27
NUP53YMR153W DAP2P18962 818 aa7.11□□□□□ -1.27
NUP53YMR153W NUD1P32336 851 aa7.11□□□□□ -1.27
NUP53YMR153W FES1P38260 290 aa7.11□□□□□ -1.27
NUP53YMR153W GIP2P40036 548 aa7.11□□□□□ -1.27
NUP53YMR153W LYS12P40495 371 aaKnown RBP7.11□□□□□ -1.27
NUP53YMR153W MRPS18P42847 217 aa7.11□□□□□ -1.27
NUP53YMR153W FDC1Q03034 503 aa7.11□□□□□ -1.27
NUP53YMR153W EFR3Q03653 782 aaKnown RBP7.11□□□□□ -1.27
NUP53YMR153W YHC1Q05900 231 aaKnown RBP7.11□□□□□ -1.27
NUP53YMR153W YLR036CQ07986 203 aa7.11□□□□□ -1.27
NUP53YMR153W FDH1Q08911 376 aa7.11□□□□□ -1.27
NUP53YMR153W MLH3Q12083 715 aa7.11□□□□□ -1.27
NUP53YMR153W MRP13P12686 339 aa7.1□□□□□ -1.27
NUP53YMR153W RPB5P20434 215 aa7.1□□□□□ -1.27
NUP53YMR153W STP2P38704 541 aa7.1□□□□□ -1.27
NUP53YMR153W CHS7P38843 316 aa7.1□□□□□ -1.27
NUP53YMR153W TDA11P38854 504 aa7.1□□□□□ -1.27
NUP53YMR153W RPS26AP39938 119 aaKnown RBP7.1□□□□□ -1.27
NUP53YMR153W RPS26BP39939 119 aaKnown RBP7.1□□□□□ -1.27
NUP53YMR153W CIN1P40987 1014 aa7.1□□□□□ -1.27
NUP53YMR153W IRC6P43615 237 aa7.1□□□□□ -1.27
NUP53YMR153W TRS85P46944 698 aa7.1□□□□□ -1.27
NUP53YMR153W APS3P47064 194 aa7.1□□□□□ -1.27
NUP53YMR153W HOS2P53096 452 aaPredicted RBP7.1□□□□□ -1.27
NUP53YMR153W ARI1P53111 347 aaKnown RBP7.1□□□□□ -1.27
NUP53YMR153W HOL1P53389 586 aa7.1□□□□□ -1.27
NUP53YMR153W YPS7Q06325 596 aa7.1□□□□□ -1.27
NUP53YMR153W YPR091CQ06833 770 aa7.1□□□□□ -1.27
NUP53YMR153W YLL007CQ07799 665 aa7.1□□□□□ -1.27
NUP53YMR153W YRM1Q12340 786 aa7.1□□□□□ -1.27
NUP53YMR153W NOP58Q12499 511 aaKnown RBP7.1□□□□□ -1.27
NUP53YMR153W CTS1P29029 562 aa7.1□□□□□ -1.27
NUP53YMR153W FRE2P36033 711 aa7.1□□□□□ -1.27
NUP53YMR153W VPS41P38959 992 aa7.1□□□□□ -1.27
NUP53YMR153W MDV1P47025 714 aa7.1□□□□□ -1.27
NUP53YMR153W RPS12P48589 143 aaKnown RBP7.1□□□□□ -1.27
NUP53YMR153W IMA1P53051 589 aa7.1□□□□□ -1.27
NUP53YMR153W RPM2Q02773 1202 aa7.1□□□□□ -1.27
NUP53YMR153W YPR172WQ06608 200 aa7.1□□□□□ -1.27
NUP53YMR153W FMP45Q07651 309 aa7.1□□□□□ -1.27
NUP53YMR153W YOR365CQ08844 703 aa7.1□□□□□ -1.27
NUP53YMR153W YVC1Q12324 675 aa7.1□□□□□ -1.27
NUP53YMR153W MMP1Q12372 583 aa7.1□□□□□ -1.27
NUP53YMR153W PAR32Q12515 295 aaKnown RBP7.1□□□□□ -1.27
NUP53YMR153W RPL20AP0CX23 172 aaKnown RBP7.09□□□□□ -1.28
NUP53YMR153W RPL20BP0CX24 172 aaPredicted RBP7.09□□□□□ -1.28
NUP53YMR153W NUP2P32499 720 aa7.09□□□□□ -1.28
NUP53YMR153W ALG3P38179 458 aa7.09□□□□□ -1.28
NUP53YMR153W CCT7P42943 550 aaKnown RBP7.09□□□□□ -1.28
NUP53YMR153W TPC1P53257 314 aa7.09□□□□□ -1.28
NUP53YMR153W ARC35P53731 342 aaKnown RBP7.09□□□□□ -1.28
NUP53YMR153W ATG21Q02887 496 aa7.09□□□□□ -1.28
NUP53YMR153W YLR413WQ06689 675 aa7.09□□□□□ -1.28
NUP53YMR153W RPN6Q12377 434 aa7.09□□□□□ -1.28
NUP53YMR153W YKL018C-AQ3E7A7 99 aa7.09□□□□□ -1.28
NUP53YMR153W TRA1P38811 3744 aa7.08□□□□□ -1.28
NUP53YMR153W CCA1P21269 546 aa7.08□□□□□ -1.28
NUP53YMR153W RPB10P22139 70 aa7.08□□□□□ -1.28
NUP53YMR153W GRR1P24814 1151 aa7.08□□□□□ -1.28
NUP53YMR153W GFD2P25370 566 aaKnown RBP7.08□□□□□ -1.28
NUP53YMR153W SEA4P38164 1038 aa7.08□□□□□ -1.28
NUP53YMR153W PAC1P39946 494 aaKnown RBP7.08□□□□□ -1.28
NUP53YMR153W YEL057CP39983 233 aa7.08□□□□□ -1.28
NUP53YMR153W JEM1P40358 645 aa7.08□□□□□ -1.28
NUP53YMR153W YJL043WP47053 257 aa7.08□□□□□ -1.28
NUP53YMR153W SEH1P53011 349 aaKnown RBP7.08□□□□□ -1.28
NUP53YMR153W ROM1P53046 1155 aa7.08□□□□□ -1.28
NUP53YMR153W YPL068CQ02749 293 aa7.08□□□□□ -1.28
NUP53YMR153W ATP25Q03153 612 aa7.08□□□□□ -1.28
NUP53YMR153W GPN2Q08726 347 aaPredicted RBP7.08□□□□□ -1.28
NUP53YMR153W YDL177CQ12257 170 aa7.08□□□□□ -1.28
NUP53YMR153W PRS5Q12265 496 aaKnown RBP7.08□□□□□ -1.28
NUP53YMR153W EXO70P19658 623 aa7.07□□□□□ -1.28
NUP53YMR153W MCK1P21965 375 aaKnown RBP7.07□□□□□ -1.28
NUP53YMR153W DHR2P36009 735 aaPredicted RBP7.07□□□□□ -1.28
NUP53YMR153W MRPL17P36528 281 aa7.07□□□□□ -1.28
NUP53YMR153W SCO2P38072 301 aa7.07□□□□□ -1.28
NUP53YMR153W GRE3P38715 327 aaKnown RBP RIP-Chip data7.07□□□□□ -1.28not detected
NUP53YMR153W GPI16P38875 610 aa7.07□□□□□ -1.28
NUP53YMR153W TAT2P38967 592 aa7.07□□□□□ -1.28
NUP53YMR153W YEL020CP39994 560 aa7.07□□□□□ -1.28
NUP53YMR153W RGI1P40043 161 aaPredicted RBP7.07□□□□□ -1.28
NUP53YMR153W GAB1P41733 394 aa7.07□□□□□ -1.28
NUP53YMR153W PAC10P48363 199 aa7.07□□□□□ -1.28
NUP53YMR153W PDR16P53860 351 aaKnown RBP7.07□□□□□ -1.28
NUP53YMR153W YNL092WP53934 400 aa7.07□□□□□ -1.28
NUP53YMR153W SKI8Q02793 397 aaPredicted RBP7.07□□□□□ -1.28
NUP53YMR153W SMA2Q04658 369 aa7.07□□□□□ -1.28
NUP53YMR153W YMR310CQ04867 317 aaPredicted RBP7.07□□□□□ -1.28
NUP53YMR153W COS7Q07788 383 aa7.07□□□□□ -1.28
NUP53YMR153W PSF1Q12488 208 aa7.07□□□□□ -1.28
NUP53YMR153W YOR032W-AQ8TGS1 66 aa7.07□□□□□ -1.28
NUP53YMR153W PHO81P17442 1178 aa7.06□□□□□ -1.28
NUP53YMR153W AAC3P18238 307 aa7.06□□□□□ -1.28
NUP53YMR153W PHO91P27514 894 aa7.06□□□□□ -1.28
Retrieved 100 of 5,963 RNA–protein pairs in 62.9 ms