RNA–Protein interactions for RNA: YLR360W

VPS38, Transcript of Part of a Vps34p phosphatidylinositol 3-kinase complex, yeastyeast

Gene VPS38, Length 1,320 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS38YLR360W YMR130WQ04223 302 aa2.97□□□□□ -1.93
VPS38YLR360W YMR027WQ04371 470 aa2.97□□□□□ -1.93
VPS38YLR360W HOM3P10869 527 aa2.96□□□□□ -1.93
VPS38YLR360W RAD57P25301 460 aa2.96□□□□□ -1.93
VPS38YLR360W YAL037WP39728 267 aa2.96□□□□□ -1.93
VPS38YLR360W SPC19Q03954 165 aa2.96□□□□□ -1.93
VPS38YLR360W NAM2P11325 894 aa2.95□□□□□ -1.94
VPS38YLR360W HXT1P32465 570 aa2.95□□□□□ -1.94
VPS38YLR360W SPR1P32603 445 aa2.95□□□□□ -1.94
VPS38YLR360W CSE2P33308 149 aa2.95□□□□□ -1.94
VPS38YLR360W YBR056WP38081 501 aa2.95□□□□□ -1.94
VPS38YLR360W JLP2P40206 208 aa2.95□□□□□ -1.94
VPS38YLR360W OCA2P53949 197 aa2.95□□□□□ -1.94
VPS38YLR360W NUP116Q02630 1113 aa2.95□□□□□ -1.94
VPS38YLR360W BCH1Q05029 724 aa2.95□□□□□ -1.94
VPS38YLR360W DCS1Q06151 350 aa2.95□□□□□ -1.94
VPS38YLR360W IRC25Q07951 179 aa2.95□□□□□ -1.94
VPS38YLR360W FDH1Q08911 376 aa2.95□□□□□ -1.94
VPS38YLR360W ADK2P26364 225 aa2.94□□□□□ -1.94
VPS38YLR360W ERV1P27882 189 aa2.94□□□□□ -1.94
VPS38YLR360W KAR9P32526 644 aa2.94□□□□□ -1.94
VPS38YLR360W SFH5P47008 294 aa2.94□□□□□ -1.94
VPS38YLR360W ADA2Q02336 434 aa2.94□□□□□ -1.94
VPS38YLR360W ACL4Q03771 387 aa2.94□□□□□ -1.94
VPS38YLR360W SRL2Q12020 392 aa2.94□□□□□ -1.94
VPS38YLR360W VPS54Q12071 889 aa2.94□□□□□ -1.94
VPS38YLR360W BUG1Q12191 341 aa2.94□□□□□ -1.94
VPS38YLR360W PCL1P24867 279 aa2.93□□□□□ -1.94
VPS38YLR360W UTH1P36135 365 aa2.93□□□□□ -1.94
VPS38YLR360W YIL029CP40538 142 aa2.93□□□□□ -1.94
VPS38YLR360W CAK1P43568 368 aaPredicted RBP2.93□□□□□ -1.94
VPS38YLR360W MDE1P47095 244 aa2.93□□□□□ -1.94
VPS38YLR360W BRO1P48582 844 aa2.93□□□□□ -1.94
VPS38YLR360W MTQ1P53944 314 aa2.93□□□□□ -1.94
VPS38YLR360W HAL1Q01766 294 aa2.93□□□□□ -1.94
VPS38YLR360W CCE1Q03702 353 aa2.93□□□□□ -1.94
VPS38YLR360W ERB1Q04660 807 aaKnown RBP2.93□□□□□ -1.94
VPS38YLR360W BSC6Q08280 497 aa2.93□□□□□ -1.94
VPS38YLR360W URA7P28274 579 aaKnown RBP2.93□□□□□ -1.94
VPS38YLR360W CHK1P38147 527 aa2.93□□□□□ -1.94
VPS38YLR360W YJR085CP47131 105 aaKnown RBP2.93□□□□□ -1.94
VPS38YLR360W HOT1Q03213 719 aa2.93□□□□□ -1.94
VPS38YLR360W MMR1Q06324 491 aa2.93□□□□□ -1.94
VPS38YLR360W ATG34Q12292 412 aa2.93□□□□□ -1.94
VPS38YLR360W PDX1P16451 410 aa2.92□□□□□ -1.94
VPS38YLR360W YCL068CP25593 260 aa2.92□□□□□ -1.94
VPS38YLR360W AIM10P39965 576 aaKnown RBP2.92□□□□□ -1.94
VPS38YLR360W NDE2Q07500 545 aa2.92□□□□□ -1.94
VPS38YLR360W MED2Q12124 431 aa2.92□□□□□ -1.94
VPS38YLR360W TPT1Q12272 230 aaKnown RBP2.92□□□□□ -1.94
VPS38YLR360W AHC1Q12433 566 aa2.92□□□□□ -1.94
VPS38YLR360W ADE4P04046 510 aaKnown RBP2.91□□□□□ -1.94
VPS38YLR360W IMA3P0CW40 589 aa2.91□□□□□ -1.94
VPS38YLR360W IMA4P0CW41 589 aa2.91□□□□□ -1.94
VPS38YLR360W CLB1P24868 471 aa2.91□□□□□ -1.94
VPS38YLR360W RPC53P25441 422 aa2.91□□□□□ -1.94
VPS38YLR360W PRS1P32895 427 aaKnown RBP2.91□□□□□ -1.94
VPS38YLR360W ATP3P38077 311 aaKnown RBP2.91□□□□□ -1.94
VPS38YLR360W SLM4P38247 162 aa2.91□□□□□ -1.94
VPS38YLR360W SBE22P38814 852 aa2.91□□□□□ -1.94
VPS38YLR360W RPT4P53549 437 aaKnown RBP2.91□□□□□ -1.94
VPS38YLR360W YDR131CQ03899 556 aa2.91□□□□□ -1.94
VPS38YLR360W URH1Q04179 340 aa2.91□□□□□ -1.94
VPS38YLR360W IMA2Q08295 589 aa2.91□□□□□ -1.94
VPS38YLR360W IZH2Q12442 317 aa2.91□□□□□ -1.94
VPS38YLR360W MTR10Q99189 972 aa2.91□□□□□ -1.94
VPS38YLR360W SOD1P00445 154 aaKnown RBP2.9□□□□□ -1.95
VPS38YLR360W NAT1P12945 854 aaKnown RBP2.9□□□□□ -1.95
VPS38YLR360W DBF4P32325 704 aa2.9□□□□□ -1.95
VPS38YLR360W NUP2P32499 720 aa2.9□□□□□ -1.95
VPS38YLR360W RRP1P35178 278 aaPredicted RBP2.9□□□□□ -1.95
VPS38YLR360W HEL1P36113 551 aa2.9□□□□□ -1.95
VPS38YLR360W COX14P39103 70 aa2.9□□□□□ -1.95
VPS38YLR360W ZIM17P42844 174 aa2.9□□□□□ -1.95
VPS38YLR360W STD1Q02794 444 aa2.9□□□□□ -1.95
VPS38YLR360W RMT2Q03305 412 aa2.9□□□□□ -1.95
VPS38YLR360W SNT309Q06091 175 aaPredicted RBP2.9□□□□□ -1.95
VPS38YLR360W RRP9Q06506 573 aaKnown RBP2.9□□□□□ -1.95
VPS38YLR360W RAX1Q08760 435 aa2.9□□□□□ -1.95
VPS38YLR360W ISA2Q12425 185 aa2.9□□□□□ -1.95
VPS38YLR360W COX3P00420 269 aa2.89□□□□□ -1.95
VPS38YLR360W UTP18P40362 594 aaPredicted RBP2.89□□□□□ -1.95
VPS38YLR360W GAB1P41733 394 aa2.89□□□□□ -1.95
VPS38YLR360W MRM2P53123 320 aa2.89□□□□□ -1.95
VPS38YLR360W MMT1Q03218 510 aa2.89□□□□□ -1.95
VPS38YLR360W CUE5Q08412 411 aaKnown RBP2.89□□□□□ -1.95
VPS38YLR360W SNU66Q12420 587 aaPredicted RBP2.89□□□□□ -1.95
VPS38YLR360W ARO3P14843 370 aaKnown RBP2.88□□□□□ -1.95
VPS38YLR360W CYS4P32582 507 aaKnown RBP2.88□□□□□ -1.95
VPS38YLR360W ASC1P38011 319 aaKnown RBP2.88□□□□□ -1.95
VPS38YLR360W MIG3P39943 394 aa2.88□□□□□ -1.95
VPS38YLR360W YER079WP40052 210 aaKnown RBP2.88□□□□□ -1.95
VPS38YLR360W SER3P40054 469 aa2.88□□□□□ -1.95
VPS38YLR360W TCB2P48231 1178 aa2.88□□□□□ -1.95
VPS38YLR360W PLP2Q12017 286 aa2.88□□□□□ -1.95
VPS38YLR360W AEP3Q12089 606 aa2.88□□□□□ -1.95
VPS38YLR360W JID1Q12350 301 aa2.88□□□□□ -1.95
VPS38YLR360W NCA2Q12374 616 aa2.88□□□□□ -1.95
VPS38YLR360W MSI1P13712 422 aa2.87□□□□□ -1.95
VPS38YLR360W CPR2P23285 205 aa2.87□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 45 ms