RNA–Protein interactions for RNA: YLR221C

RSA3, Transcript of Protein with a likely role in ribosomal maturation, yeast

Gene RSA3, Length 663 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSA3	YLR221C	ROG1	P53118	685 aa		5.1	□□□□□ -1.59
RSA3	YLR221C	TOF1	P53840	1238 aa		5.1	□□□□□ -1.59
RSA3	YLR221C	MEH1	Q02205	184 aa		5.1	□□□□□ -1.59
RSA3	YLR221C	YDR286C	Q05530	114 aa		5.1	□□□□□ -1.59
RSA3	YLR221C	PGC1	Q08959	321 aa		5.1	□□□□□ -1.59
RSA3	YLR221C	DST1	P07273	309 aa		5.09	□□□□□ -1.59
RSA3	YLR221C	IMA3	P0CW40	589 aa		5.09	□□□□□ -1.59
RSA3	YLR221C	IMA4	P0CW41	589 aa		5.09	□□□□□ -1.59
RSA3	YLR221C	KRR1	P25586	316 aa	Predicted RBP	5.09	□□□□□ -1.59
RSA3	YLR221C	NRP1	P32770	719 aa	Known RBP RIP-Chip data	5.09	□□□□□ -1.59	not detected
RSA3	YLR221C	YJL213W	P40896	331 aa		5.09	□□□□□ -1.59
RSA3	YLR221C	PAC11	P40960	533 aa		5.09	□□□□□ -1.59
RSA3	YLR221C	PHB2	P50085	310 aa		5.09	□□□□□ -1.59
RSA3	YLR221C	COS10	P52924	374 aa		5.09	□□□□□ -1.59
RSA3	YLR221C	IBD2	P53892	351 aa		5.09	□□□□□ -1.59
RSA3	YLR221C	IMA2	Q08295	589 aa		5.09	□□□□□ -1.59
RSA3	YLR221C	HEM2	P05373	342 aa		5.08	□□□□□ -1.6
RSA3	YLR221C	CHS1	P08004	1131 aa		5.08	□□□□□ -1.6
RSA3	YLR221C	ATS1	P31386	333 aa		5.08	□□□□□ -1.6
RSA3	YLR221C	KKQ8	P36004	724 aa		5.08	□□□□□ -1.6
RSA3	YLR221C	KAP104	P38217	918 aa	Known RBP	5.08	□□□□□ -1.6
RSA3	YLR221C	STD1	Q02794	444 aa		5.08	□□□□□ -1.6
RSA3	YLR221C	YMR181C	Q03231	154 aa		5.08	□□□□□ -1.6
RSA3	YLR221C	SNT309	Q06091	175 aa	Predicted RBP	5.08	□□□□□ -1.6
RSA3	YLR221C	RRP9	Q06506	573 aa	Known RBP	5.08	□□□□□ -1.6
RSA3	YLR221C	SRL2	Q12020	392 aa		5.08	□□□□□ -1.6
RSA3	YLR221C	PPT2	Q12036	173 aa		5.08	□□□□□ -1.6
RSA3	YLR221C	RAD61	Q99359	647 aa		5.08	□□□□□ -1.6
RSA3	YLR221C	NFT1	P0CE68	1218 aa		5.07	□□□□□ -1.6
RSA3	YLR221C	SPO12	P17123	173 aa		5.07	□□□□□ -1.6
RSA3	YLR221C	SPS22	P25380	463 aa		5.07	□□□□□ -1.6
RSA3	YLR221C	POT1	P27796	417 aa	Known RBP RIP-Chip data	5.07	□□□□□ -1.6	not detected
RSA3	YLR221C	LOS1	P33418	1100 aa	Predicted RBP	5.07	□□□□□ -1.6
RSA3	YLR221C	UIP5	P36137	443 aa		5.07	□□□□□ -1.6
RSA3	YLR221C	QDR3	P38227	689 aa		5.07	□□□□□ -1.6
RSA3	YLR221C	YDL186W	P48568	277 aa		5.07	□□□□□ -1.6
RSA3	YLR221C	IPK1	Q06667	281 aa		5.07	□□□□□ -1.6
RSA3	YLR221C	RRP12	Q12754	1228 aa	Known RBP	5.07	□□□□□ -1.6
RSA3	YLR221C	VMA2	P16140	517 aa	Known RBP	5.06	□□□□□ -1.6
RSA3	YLR221C	MCK1	P21965	375 aa	Known RBP	5.06	□□□□□ -1.6
RSA3	YLR221C	RNA14	P25298	677 aa	Known RBP	5.06	□□□□□ -1.6
RSA3	YLR221C	NAT2	P37293	288 aa		5.06	□□□□□ -1.6
RSA3	YLR221C	ATP3	P38077	311 aa	Known RBP	5.06	□□□□□ -1.6
RSA3	YLR221C	ADH5	P38113	351 aa	Known RBP	5.06	□□□□□ -1.6
RSA3	YLR221C	RIB5	P38145	238 aa		5.06	□□□□□ -1.6
RSA3	YLR221C	MNL1	P38888	796 aa		5.06	□□□□□ -1.6
RSA3	YLR221C	CHS6	P40955	746 aa		5.06	□□□□□ -1.6
RSA3	YLR221C	YIP5	P53108	310 aa		5.06	□□□□□ -1.6
RSA3	YLR221C	YMR317W	Q04893	1140 aa		5.06	□□□□□ -1.6
RSA3	YLR221C	TIP41	Q12199	356 aa		5.06	□□□□□ -1.6
RSA3	YLR221C	CPR1	P14832	162 aa	Known RBP	5.05	□□□□□ -1.6
RSA3	YLR221C	DAP2	P18962	818 aa		5.05	□□□□□ -1.6
RSA3	YLR221C	SMI1	P32566	505 aa		5.05	□□□□□ -1.6
RSA3	YLR221C	YSC83	P32792	385 aa		5.05	□□□□□ -1.6
RSA3	YLR221C	MRP4	P32902	394 aa		5.05	□□□□□ -1.6
RSA3	YLR221C	SIF2	P38262	535 aa		5.05	□□□□□ -1.6
RSA3	YLR221C	YBP1	P38315	674 aa		5.05	□□□□□ -1.6
RSA3	YLR221C	FAA2	P39518	744 aa		5.05	□□□□□ -1.6
RSA3	YLR221C	YAT2	P40017	923 aa		5.05	□□□□□ -1.6
RSA3	YLR221C	MMF1	P40185	145 aa	Known RBP	5.05	□□□□□ -1.6
RSA3	YLR221C	MKT1	P40850	830 aa	Known RBP	5.05	□□□□□ -1.6
RSA3	YLR221C	DBP9	Q06218	594 aa	Known RBP	5.05	□□□□□ -1.6
RSA3	YLR221C	GDH1	P07262	454 aa	Known RBP	5.04	□□□□□ -1.6
RSA3	YLR221C	ITR1	P30605	584 aa		5.04	□□□□□ -1.6
RSA3	YLR221C	FAA1	P30624	700 aa	Known RBP	5.04	□□□□□ -1.6
RSA3	YLR221C	MIX23	P38162	196 aa		5.04	□□□□□ -1.6
RSA3	YLR221C	YBL028C	P38202	106 aa		5.04	□□□□□ -1.6
RSA3	YLR221C	RTT102	P53330	157 aa		5.04	□□□□□ -1.6
RSA3	YLR221C	MSO1	P53604	210 aa	Known RBP	5.04	□□□□□ -1.6
RSA3	YLR221C	PRP3	Q03338	469 aa	Predicted RBP	5.04	□□□□□ -1.6
RSA3	YLR221C	AAD15	Q08361	143 aa		5.04	□□□□□ -1.6
RSA3	YLR221C	NDD1	Q08887	554 aa		5.04	□□□□□ -1.6
RSA3	YLR221C	TPT1	Q12272	230 aa	Known RBP	5.04	□□□□□ -1.6
RSA3	YLR221C	CEX1	Q12453	761 aa		5.04	□□□□□ -1.6
RSA3	YLR221C	NBL1	Q3E7Y6	73 aa		5.04	□□□□□ -1.6
RSA3	YLR221C	SLY1	P22213	666 aa		5.03	□□□□□ -1.6
RSA3	YLR221C	UBA1	P22515	1024 aa	Known RBP	5.03	□□□□□ -1.6
RSA3	YLR221C	SLM5	P25345	492 aa	Known RBP	5.03	□□□□□ -1.6
RSA3	YLR221C	YEL043W	P32618	956 aa		5.03	□□□□□ -1.6
RSA3	YLR221C	SKN1	P33336	771 aa		5.03	□□□□□ -1.6
RSA3	YLR221C	STP2	P38704	541 aa		5.03	□□□□□ -1.6
RSA3	YLR221C	IDP2	P41939	412 aa		5.03	□□□□□ -1.6
RSA3	YLR221C	YFL067W	P43537	175 aa		5.03	□□□□□ -1.6
RSA3	YLR221C	AZR1	P50080	613 aa		5.03	□□□□□ -1.6
RSA3	YLR221C	WSC2	P53832	503 aa		5.03	□□□□□ -1.6
RSA3	YLR221C	TRX1	P22217	103 aa	Known RBP	5.02	□□□□□ -1.61
RSA3	YLR221C	OST1	P41543	476 aa	Known RBP	5.02	□□□□□ -1.61
RSA3	YLR221C	MEP2	P41948	499 aa		5.02	□□□□□ -1.61
RSA3	YLR221C	FYV8	P46949	817 aa	Known RBP	5.02	□□□□□ -1.61
RSA3	YLR221C	SFH5	P47008	294 aa		5.02	□□□□□ -1.61
RSA3	YLR221C	SNX3	Q08826	162 aa	Known RBP	5.02	□□□□□ -1.61
RSA3	YLR221C	THP3	Q12049	470 aa	Known RBP	5.02	□□□□□ -1.61
RSA3	YLR221C	RNH203	Q12338	110 aa		5.02	□□□□□ -1.61
RSA3	YLR221C	YBR298C-A	Q8TGK4	73 aa		5.02	□□□□□ -1.61
RSA3	YLR221C	HEM15	P16622	393 aa		5.01	□□□□□ -1.61
RSA3	YLR221C	COX13	P32799	129 aa		5.01	□□□□□ -1.61
RSA3	YLR221C	RGT1	P32862	1170 aa		5.01	□□□□□ -1.61
RSA3	YLR221C	MTC6	P38849	526 aa		5.01	□□□□□ -1.61
RSA3	YLR221C	GOR1	P53839	350 aa		5.01	□□□□□ -1.61
RSA3	YLR221C	URC2	Q04411	772 aa		5.01	□□□□□ -1.61

Retrieved 100 of 5,963 RNA–protein pairs in 42.5 ms