RNA–Protein interactions for RNA: YLR006C

SSK1, Transcript of Cytoplasmic phosphorelay intermediate osmosensor and regulator, yeastyeast

Gene SSK1, Length 2,139 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSK1YLR006C YKR005CQ02203 525 aa5.58□□□□□ -1.52
SSK1YLR006C TRS31Q03337 283 aa5.58□□□□□ -1.52
SSK1YLR006C ENT5Q03769 411 aaKnown RBP5.58□□□□□ -1.52
SSK1YLR006C KRE28Q04431 385 aa5.58□□□□□ -1.52
SSK1YLR006C ARG7Q04728 441 aa5.58□□□□□ -1.52
SSK1YLR006C DCR2Q05924 578 aa5.58□□□□□ -1.52
SSK1YLR006C PUS9Q12069 462 aa5.58□□□□□ -1.52
SSK1YLR006C NAM9P27929 486 aa5.57□□□□□ -1.52
SSK1YLR006C MSS51P32335 436 aa5.57□□□□□ -1.52
SSK1YLR006C SEF1P34228 1148 aa5.57□□□□□ -1.52
SSK1YLR006C BSD2P38356 321 aa5.57□□□□□ -1.52
SSK1YLR006C FSH1P38777 243 aaKnown RBP5.57□□□□□ -1.52
SSK1YLR006C SFB3P38810 929 aa5.57□□□□□ -1.52
SSK1YLR006C CDC40P40968 455 aaPredicted RBP5.57□□□□□ -1.52
SSK1YLR006C STB1P42845 420 aa5.57□□□□□ -1.52
SSK1YLR006C QRI1P43123 477 aaKnown RBP5.57□□□□□ -1.52
SSK1YLR006C CAK1P43568 368 aaPredicted RBP5.57□□□□□ -1.52
SSK1YLR006C GTO1P48239 356 aa5.57□□□□□ -1.52
SSK1YLR006C YNL033WP53964 284 aa5.57□□□□□ -1.52
SSK1YLR006C YNL019CP53975 284 aa5.57□□□□□ -1.52
SSK1YLR006C MTD1Q02046 320 aaKnown RBP5.57□□□□□ -1.52
SSK1YLR006C RMI1Q02685 241 aa5.57□□□□□ -1.52
SSK1YLR006C TAF12Q03761 539 aa5.57□□□□□ -1.52
SSK1YLR006C PPN1Q04119 674 aa5.57□□□□□ -1.52
SSK1YLR006C SYT1Q06836 1226 aa5.57□□□□□ -1.52
SSK1YLR006C NSL1Q12143 216 aa5.57□□□□□ -1.52
SSK1YLR006C YOS9Q99220 542 aa5.57□□□□□ -1.52
SSK1YLR006C RHO1P06780 209 aaKnown RBP5.57□□□□□ -1.52
SSK1YLR006C BCY1P07278 416 aaKnown RBP5.57□□□□□ -1.52
SSK1YLR006C RHB1P25378 209 aa5.57□□□□□ -1.52
SSK1YLR006C CSM1P25651 190 aa5.57□□□□□ -1.52
SSK1YLR006C YCR090CP25654 182 aaKnown RBP5.57□□□□□ -1.52
SSK1YLR006C CYS3P31373 394 aaKnown RBP5.57□□□□□ -1.52
SSK1YLR006C SSE2P32590 693 aaKnown RBP5.57□□□□□ -1.52
SSK1YLR006C MLH1P38920 769 aa5.57□□□□□ -1.52
SSK1YLR006C PCF11P39081 626 aaPredicted RBP5.57□□□□□ -1.52
SSK1YLR006C FAA2P39518 744 aa5.57□□□□□ -1.52
SSK1YLR006C RGI2P40188 164 aa5.57□□□□□ -1.52
SSK1YLR006C YJR154WP47181 346 aa5.57□□□□□ -1.52
SSK1YLR006C ECL1P48235 211 aa5.57□□□□□ -1.52
SSK1YLR006C NOP19P53317 196 aaPredicted RBP5.57□□□□□ -1.52
SSK1YLR006C MSC2Q03455 724 aa5.57□□□□□ -1.52
SSK1YLR006C RPN9Q04062 393 aaKnown RBP5.57□□□□□ -1.52
SSK1YLR006C YPQ2Q06328 317 aa5.57□□□□□ -1.52
SSK1YLR006C NDE2Q07500 545 aa5.57□□□□□ -1.52
SSK1YLR006C YDL114WQ07530 308 aa5.57□□□□□ -1.52
SSK1YLR006C DTD1Q07648 150 aaKnown RBP5.57□□□□□ -1.52
SSK1YLR006C RSB1Q08417 382 aa5.57□□□□□ -1.52
SSK1YLR006C RDR1Q08904 546 aa5.57□□□□□ -1.52
SSK1YLR006C AEP3Q12089 606 aa5.57□□□□□ -1.52
SSK1YLR006C NBP2Q12163 236 aa5.57□□□□□ -1.52
SSK1YLR006C ATG31Q12421 196 aa5.57□□□□□ -1.52
SSK1YLR006C YPL247CQ12523 523 aa5.57□□□□□ -1.52
SSK1YLR006C MEK1P24719 497 aaPredicted RBP5.56□□□□□ -1.52
SSK1YLR006C CIN8P27895 1000 aa5.56□□□□□ -1.52
SSK1YLR006C NAB2P32505 525 aaKnown RBP RIP-Chip data5.56□□□□□ -1.52 RIP-Chip
SSK1YLR006C SLX5P32828 619 aaKnown RBP5.56□□□□□ -1.52
SSK1YLR006C RGT1P32862 1170 aa5.56□□□□□ -1.52
SSK1YLR006C SHE3P38272 425 aaKnown RBP5.56□□□□□ -1.52
SSK1YLR006C FMO1P38866 432 aa5.56□□□□□ -1.52
SSK1YLR006C ECM27P47144 725 aa5.56□□□□□ -1.52
SSK1YLR006C LSG1P53145 640 aaKnown RBP5.56□□□□□ -1.52
SSK1YLR006C YDR239CQ03780 787 aa5.56□□□□□ -1.52
SSK1YLR006C SPG3Q04398 127 aaPredicted RBP5.56□□□□□ -1.52
SSK1YLR006C VAM6Q07468 1049 aa5.56□□□□□ -1.52
SSK1YLR006C YDL129WQ07555 291 aa5.56□□□□□ -1.52
SSK1YLR006C VAM3Q12241 283 aa5.56□□□□□ -1.52
SSK1YLR006C ATP6P00854 259 aa5.56□□□□□ -1.52
SSK1YLR006C MSF1P08425 469 aa5.56□□□□□ -1.52
SSK1YLR006C FBA1P14540 359 aaKnown RBP5.56□□□□□ -1.52
SSK1YLR006C YSP3P25036 478 aa5.56□□□□□ -1.52
SSK1YLR006C NFS1P25374 497 aa5.56□□□□□ -1.52
SSK1YLR006C YIH1P25637 258 aa5.56□□□□□ -1.52
SSK1YLR006C ITR2P30606 609 aa5.56□□□□□ -1.52
SSK1YLR006C SAC1P32368 623 aaKnown RBP5.56□□□□□ -1.52
SSK1YLR006C UTP11P34247 250 aaPredicted RBP5.56□□□□□ -1.52
SSK1YLR006C VRP1P37370 817 aa5.56□□□□□ -1.52
SSK1YLR006C MRP21P38175 177 aa5.56□□□□□ -1.52
SSK1YLR006C YBR053CP38235 358 aa5.56□□□□□ -1.52
SSK1YLR006C CYC2P38909 366 aa5.56□□□□□ -1.52
SSK1YLR006C UME6P39001 836 aa5.56□□□□□ -1.52
SSK1YLR006C SER3P40054 469 aa5.56□□□□□ -1.52
SSK1YLR006C CDC1P40986 491 aa5.56□□□□□ -1.52
SSK1YLR006C COX16P47081 118 aa5.56□□□□□ -1.52
SSK1YLR006C YJR124CP47159 448 aa5.56□□□□□ -1.52
SSK1YLR006C SLM2P53955 656 aa5.56□□□□□ -1.52
SSK1YLR006C YOL159CQ08300 171 aa5.56□□□□□ -1.52
SSK1YLR006C RCN2Q12044 265 aa5.56□□□□□ -1.52
SSK1YLR006C PNS1Q12412 539 aa5.56□□□□□ -1.52
SSK1YLR006C SAS5Q99314 248 aa5.56□□□□□ -1.52
SSK1YLR006C COX5AP00424 153 aa5.55□□□□□ -1.52
SSK1YLR006C HIS1P00498 297 aaKnown RBP5.55□□□□□ -1.52
SSK1YLR006C UBA1P22515 1024 aaKnown RBP5.55□□□□□ -1.52
SSK1YLR006C YCP4P25349 247 aaKnown RBP5.55□□□□□ -1.52
SSK1YLR006C IMP3P32899 183 aaPredicted RBP5.55□□□□□ -1.52
SSK1YLR006C TYE7P33122 291 aaPredicted RBP5.55□□□□□ -1.52
SSK1YLR006C YBR285WP38354 144 aa5.55□□□□□ -1.52
SSK1YLR006C URA8P38627 578 aaPredicted RBP5.55□□□□□ -1.52
SSK1YLR006C AFG3P39925 761 aa5.55□□□□□ -1.52
SSK1YLR006C YGR126WP53274 230 aa5.55□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 74.6 ms