RNA–Protein interactions for RNA: YKR029C

SET3, Transcript of Defining member of the SET3 histone deacetylase complex, yeastyeast

Gene SET3, Length 2,256 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SET3YKR029C RAD57P25301 460 aa1.17□□□□□ -2.22
SET3YKR029C CTR86P25355 563 aa1.17□□□□□ -2.22
SET3YKR029C ATS1P31386 333 aa1.17□□□□□ -2.22
SET3YKR029C AGA1P32323 725 aa1.17□□□□□ -2.22
SET3YKR029C CYS4P32582 507 aaKnown RBP1.17□□□□□ -2.22
SET3YKR029C PAD1P33751 242 aaKnown RBP RIP-Chip data1.17□□□□□ -2.22not detected
SET3YKR029C ZTA1P38230 334 aaKnown RBP1.17□□□□□ -2.22
SET3YKR029C RRP4P38792 359 aaKnown RBP1.17□□□□□ -2.22
SET3YKR029C SEC28P40509 296 aaKnown RBP1.17□□□□□ -2.22
SET3YKR029C GCD10P41814 478 aa1.17□□□□□ -2.22
SET3YKR029C WWM1P43582 211 aaKnown RBP1.17□□□□□ -2.22
SET3YKR029C RRT5P43607 289 aa1.17□□□□□ -2.22
SET3YKR029C GPI15P53961 229 aa1.17□□□□□ -2.22
SET3YKR029C ARK1P53974 638 aa1.17□□□□□ -2.22
SET3YKR029C MMT1Q03218 510 aa1.17□□□□□ -2.22
SET3YKR029C PRP42Q03776 544 aaKnown RBP1.17□□□□□ -2.22
SET3YKR029C RPN9Q04062 393 aaKnown RBP1.17□□□□□ -2.22
SET3YKR029C SMA2Q04658 369 aa1.17□□□□□ -2.22
SET3YKR029C RTT103Q05543 409 aa1.17□□□□□ -2.22
SET3YKR029C ESA1Q08649 445 aa1.17□□□□□ -2.22
SET3YKR029C THP3Q12049 470 aaKnown RBP1.17□□□□□ -2.22
SET3YKR029C ORT1Q12375 292 aa1.17□□□□□ -2.22
SET3YKR029C CEX1Q12453 761 aa1.17□□□□□ -2.22
SET3YKR029C DNF2Q12675 1612 aa1.17□□□□□ -2.22
SET3YKR029C ADE4P04046 510 aaKnown RBP1.17□□□□□ -2.22
SET3YKR029C CDC21P06785 304 aa1.17□□□□□ -2.22
SET3YKR029C DST1P07273 309 aa1.17□□□□□ -2.22
SET3YKR029C GEX1P25596 615 aa1.17□□□□□ -2.22
SET3YKR029C PUP2P32379 260 aa1.17□□□□□ -2.22
SET3YKR029C MUD1P32605 298 aaKnown RBP1.17□□□□□ -2.22
SET3YKR029C LOS1P33418 1100 aaPredicted RBP1.17□□□□□ -2.22
SET3YKR029C MIX23P38162 196 aa1.17□□□□□ -2.22
SET3YKR029C FAD1P38913 306 aa1.17□□□□□ -2.22
SET3YKR029C SER3P40054 469 aa1.17□□□□□ -2.22
SET3YKR029C GAT2P40209 560 aa1.17□□□□□ -2.22
SET3YKR029C OST1P41543 476 aaKnown RBP1.17□□□□□ -2.22
SET3YKR029C PHB2P50085 310 aa1.17□□□□□ -2.22
SET3YKR029C GOR1P53839 350 aa1.17□□□□□ -2.22
SET3YKR029C KTR5P53966 522 aaPredicted RBP1.17□□□□□ -2.22
SET3YKR029C PEX25Q02969 394 aa1.17□□□□□ -2.22
SET3YKR029C HER2Q03557 464 aa1.17□□□□□ -2.22
SET3YKR029C URH1Q04179 340 aa1.17□□□□□ -2.22
SET3YKR029C YLR456WQ06199 204 aa1.17□□□□□ -2.22
SET3YKR029C UAF30Q08747 228 aa1.17□□□□□ -2.22
SET3YKR029C SNX3Q08826 162 aaKnown RBP1.17□□□□□ -2.22
SET3YKR029C RPN5Q12250 445 aaKnown RBP1.17□□□□□ -2.22
SET3YKR029C YMR230W-AQ3E7B5 62 aa1.17□□□□□ -2.22
SET3YKR029C SUP35P05453 685 aaKnown RBP1.16□□□□□ -2.22
SET3YKR029C RPL6BP05739 176 aaKnown RBP1.16□□□□□ -2.22
SET3YKR029C CBS2P14905 389 aa1.16□□□□□ -2.22
SET3YKR029C SLY1P22213 666 aa1.16□□□□□ -2.22
SET3YKR029C ARO2P28777 376 aaKnown RBP1.16□□□□□ -2.22
SET3YKR029C DEG1P31115 442 aaKnown RBP1.16□□□□□ -2.22
SET3YKR029C NIP1P32497 812 aaKnown RBP1.16□□□□□ -2.22
SET3YKR029C SWI3P32591 825 aa1.16□□□□□ -2.22
SET3YKR029C YBL059WP34224 193 aa1.16□□□□□ -2.22
SET3YKR029C ASC1P38011 319 aaKnown RBP1.16□□□□□ -2.22
SET3YKR029C KAP104P38217 918 aaKnown RBP1.16□□□□□ -2.22
SET3YKR029C TIF5P38431 405 aaKnown RBP1.16□□□□□ -2.22
SET3YKR029C NDT80P38830 627 aa1.16□□□□□ -2.22
SET3YKR029C WSS1P38838 269 aa1.16□□□□□ -2.22
SET3YKR029C YHR218WP38899 603 aa1.16□□□□□ -2.22
SET3YKR029C FAA2P39518 744 aa1.16□□□□□ -2.22
SET3YKR029C YER079WP40052 210 aaKnown RBP1.16□□□□□ -2.22
SET3YKR029C MMF1P40185 145 aaKnown RBP1.16□□□□□ -2.22
SET3YKR029C NCA3P46955 337 aa1.16□□□□□ -2.22
SET3YKR029C SFH5P47008 294 aa1.16□□□□□ -2.22
SET3YKR029C YGL242CP53066 181 aa1.16□□□□□ -2.22
SET3YKR029C EOS1P53938 366 aa1.16□□□□□ -2.22
SET3YKR029C IMP4P53941 290 aaKnown RBP1.16□□□□□ -2.22
SET3YKR029C RPL6AQ02326 176 aaKnown RBP1.16□□□□□ -2.22
SET3YKR029C STD1Q02794 444 aa1.16□□□□□ -2.22
SET3YKR029C YDR541CQ03049 344 aa1.16□□□□□ -2.22
SET3YKR029C PPM1Q04081 328 aa1.16□□□□□ -2.22
SET3YKR029C PBA1Q05778 276 aa1.16□□□□□ -2.22
SET3YKR029C RRP9Q06506 573 aaKnown RBP1.16□□□□□ -2.22
SET3YKR029C NSE1Q07913 336 aa1.16□□□□□ -2.22
SET3YKR029C SNU66Q12420 587 aaPredicted RBP1.16□□□□□ -2.22
SET3YKR029C YCL021W-AQ96VH3 125 aa1.16□□□□□ -2.22
SET3YKR029C SRN2Q99176 213 aa1.16□□□□□ -2.22
SET3YKR029C CHD1P32657 1468 aa1.16□□□□□ -2.22
SET3YKR029C RKR1Q04781 1562 aa1.16□□□□□ -2.22
SET3YKR029C YOR093CQ12275 1648 aa1.16□□□□□ -2.22
SET3YKR029C RPL1AP0CX43 217 aaKnown RBP1.15□□□□□ -2.22
SET3YKR029C RPL1BP0CX44 217 aaKnown RBP1.15□□□□□ -2.22
SET3YKR029C SPT15P13393 240 aaKnown RBP1.15□□□□□ -2.22
SET3YKR029C ALG1P16661 449 aa1.15□□□□□ -2.22
SET3YKR029C RNA14P25298 677 aaKnown RBP1.15□□□□□ -2.22
SET3YKR029C CPR4P25334 318 aa1.15□□□□□ -2.22
SET3YKR029C SLM5P25345 492 aaKnown RBP1.15□□□□□ -2.22
SET3YKR029C PHO91P27514 894 aa1.15□□□□□ -2.22
SET3YKR029C COX13P32799 129 aa1.15□□□□□ -2.22
SET3YKR029C HEL1P36113 551 aa1.15□□□□□ -2.22
SET3YKR029C YBL028CP38202 106 aa1.15□□□□□ -2.22
SET3YKR029C RXT2P38255 430 aa1.15□□□□□ -2.22
SET3YKR029C INM1P38710 295 aa1.15□□□□□ -2.22
SET3YKR029C PTH1P38876 190 aaKnown RBP1.15□□□□□ -2.22
SET3YKR029C EFM4P40516 257 aa1.15□□□□□ -2.22
SET3YKR029C YPS6P40583 537 aa1.15□□□□□ -2.22
SET3YKR029C EPL1P43572 832 aa1.15□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 73.4 ms