RNA–Protein interactions for RNA: YIL076W

SEC28, Transcript of Epsilon-COP subunit of the coatomer, yeastyeast

Gene SEC28, Length 891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC28YIL076W YIL029CP40538 142 aa3.3□□□□□ -1.88
SEC28YIL076W YGL138CP53122 345 aa3.3□□□□□ -1.88
SEC28YIL076W JID1Q12350 301 aa3.3□□□□□ -1.88
SEC28YIL076W CCH1P50077 2039 aa3.29□□□□□ -1.88
SEC28YIL076W YME2P32843 850 aa3.29□□□□□ -1.88
SEC28YIL076W SPT10P35208 640 aa3.29□□□□□ -1.88
SEC28YIL076W SLX1P38324 304 aa3.29□□□□□ -1.88
SEC28YIL076W ARX1Q03862 593 aaKnown RBP3.29□□□□□ -1.88
SEC28YIL076W BUD21Q08492 214 aaPredicted RBP3.29□□□□□ -1.88
SEC28YIL076W SMF3Q12078 473 aaPredicted RBP3.29□□□□□ -1.88
SEC28YIL076W SNU66Q12420 587 aaPredicted RBP3.29□□□□□ -1.88
SEC28YIL076W PGA3Q12746 312 aaKnown RBP3.29□□□□□ -1.88
SEC28YIL076W CHK1P38147 527 aa3.28□□□□□ -1.88
SEC28YIL076W RRP4P38792 359 aaKnown RBP3.28□□□□□ -1.88
SEC28YIL076W BIR1P47134 954 aa3.28□□□□□ -1.88
SEC28YIL076W LIP2Q06005 328 aa3.28□□□□□ -1.88
SEC28YIL076W RIF2Q06208 395 aa3.28□□□□□ -1.88
SEC28YIL076W MON2P48563 1636 aaPredicted RBP3.28□□□□□ -1.88
SEC28YIL076W AAT2P23542 418 aaKnown RBP3.27□□□□□ -1.89
SEC28YIL076W RRN10P38204 145 aa3.27□□□□□ -1.89
SEC28YIL076W COX14P39103 70 aa3.27□□□□□ -1.89
SEC28YIL076W NDE2Q07500 545 aa3.27□□□□□ -1.89
SEC28YIL076W RAX1Q08760 435 aa3.27□□□□□ -1.89
SEC28YIL076W TPT1Q12272 230 aaKnown RBP3.27□□□□□ -1.89
SEC28YIL076W YBL111CQ3E7Y5 667 aa3.27□□□□□ -1.89
SEC28YIL076W MSI1P13712 422 aa3.26□□□□□ -1.89
SEC28YIL076W YCL068CP25593 260 aa3.26□□□□□ -1.89
SEC28YIL076W YBR056WP38081 501 aa3.26□□□□□ -1.89
SEC28YIL076W YFR057WP43625 151 aa3.26□□□□□ -1.89
SEC28YIL076W MRM2P53123 320 aa3.26□□□□□ -1.89
SEC28YIL076W CCE1Q03702 353 aa3.26□□□□□ -1.89
SEC28YIL076W TSR2Q06672 205 aaKnown RBP3.26□□□□□ -1.89
SEC28YIL076W DIS3Q08162 1001 aaKnown RBP3.26□□□□□ -1.89
SEC28YIL076W INO80P53115 1489 aa3.26□□□□□ -1.89
SEC28YIL076W YRF1-4O13559 1382 aa3.25□□□□□ -1.89
SEC28YIL076W PHA2P32452 334 aa3.25□□□□□ -1.89
SEC28YIL076W RRP1P35178 278 aaPredicted RBP3.25□□□□□ -1.89
SEC28YIL076W BAT1P38891 393 aaKnown RBP3.25□□□□□ -1.89
SEC28YIL076W OXA1P39952 402 aa3.25□□□□□ -1.89
SEC28YIL076W YER186CP40101 306 aa3.25□□□□□ -1.89
SEC28YIL076W SKO1Q02100 647 aa3.25□□□□□ -1.89
SEC28YIL076W ATG34Q12292 412 aa3.25□□□□□ -1.89
SEC28YIL076W TY1B-AO13527 1196 aaKnown RBP3.24□□□□□ -1.89
SEC28YIL076W IMA3P0CW40 589 aa3.24□□□□□ -1.89
SEC28YIL076W IMA4P0CW41 589 aa3.24□□□□□ -1.89
SEC28YIL076W IES6P32617 166 aa3.24□□□□□ -1.89
SEC28YIL076W MMS4P38257 691 aa3.24□□□□□ -1.89
SEC28YIL076W GPD2P41911 440 aaKnown RBP3.24□□□□□ -1.89
SEC28YIL076W VHS1Q03785 461 aa3.24□□□□□ -1.89
SEC28YIL076W COG4Q06096 861 aa3.24□□□□□ -1.89
SEC28YIL076W IMA2Q08295 589 aa3.24□□□□□ -1.89
SEC28YIL076W YGK3Q12222 375 aaPredicted RBP3.24□□□□□ -1.89
SEC28YIL076W ISN1Q99312 450 aa3.24□□□□□ -1.89
SEC28YIL076W PSK1P31374 1356 aa3.24□□□□□ -1.89
SEC28YIL076W RPB5P20434 215 aa3.23□□□□□ -1.89
SEC28YIL076W PRR1P28708 518 aa3.23□□□□□ -1.89
SEC28YIL076W SEO1P39709 593 aa3.23□□□□□ -1.89
SEC28YIL076W EGT2P42835 1041 aa3.23□□□□□ -1.89
SEC28YIL076W RTN1Q04947 295 aaKnown RBP3.23□□□□□ -1.89
SEC28YIL076W MDM36Q06820 579 aa3.23□□□□□ -1.89
SEC28YIL076W HOM3P10869 527 aa3.22□□□□□ -1.89
SEC28YIL076W URA4P20051 364 aa3.22□□□□□ -1.89
SEC28YIL076W DPH5P32469 300 aaPredicted RBP3.22□□□□□ -1.89
SEC28YIL076W SIM1P40472 476 aa3.22□□□□□ -1.89
SEC28YIL076W LCB3P47013 409 aa3.22□□□□□ -1.89
SEC28YIL076W BNS1P50084 137 aa3.22□□□□□ -1.89
SEC28YIL076W MRPS16Q02608 121 aa3.22□□□□□ -1.89
SEC28YIL076W URH1Q04179 340 aa3.22□□□□□ -1.89
SEC28YIL076W SNT309Q06091 175 aaPredicted RBP3.22□□□□□ -1.89
SEC28YIL076W RRP9Q06506 573 aaKnown RBP3.22□□□□□ -1.89
SEC28YIL076W COX4P04037 155 aa3.21□□□□□ -1.9
SEC28YIL076W ATG18P43601 500 aa3.21□□□□□ -1.9
SEC28YIL076W MST27P53176 234 aa3.21□□□□□ -1.9
SEC28YIL076W CRH1P53301 507 aa3.21□□□□□ -1.9
SEC28YIL076W OCA2P53949 197 aa3.21□□□□□ -1.9
SEC28YIL076W KAP120Q02932 1032 aa3.21□□□□□ -1.9
SEC28YIL076W YET2Q04210 160 aa3.21□□□□□ -1.9
SEC28YIL076W DON1Q05610 365 aa3.21□□□□□ -1.9
SEC28YIL076W DCS1Q06151 350 aa3.21□□□□□ -1.9
SEC28YIL076W CMS1Q07897 291 aaKnown RBP3.21□□□□□ -1.9
SEC28YIL076W YPQ1Q12010 308 aa3.21□□□□□ -1.9
SEC28YIL076W BUG1Q12191 341 aa3.21□□□□□ -1.9
SEC28YIL076W REC107P21651 314 aa3.2□□□□□ -1.9
SEC28YIL076W BRF1P29056 596 aa3.2□□□□□ -1.9
SEC28YIL076W MRPS9P38120 278 aa3.2□□□□□ -1.9
SEC28YIL076W PTI1P39927 425 aaPredicted RBP3.2□□□□□ -1.9
SEC28YIL076W YMR130WQ04223 302 aa3.2□□□□□ -1.9
SEC28YIL076W ROY1Q04847 553 aa3.2□□□□□ -1.9
SEC28YIL076W YLR287CQ05881 355 aa3.2□□□□□ -1.9
SEC28YIL076W DNL4Q08387 944 aaPredicted RBP3.2□□□□□ -1.9
SEC28YIL076W ADE4P04046 510 aaKnown RBP3.19□□□□□ -1.9
SEC28YIL076W EXG1P23776 448 aaKnown RBP3.19□□□□□ -1.9
SEC28YIL076W NIP1P32497 812 aaKnown RBP3.19□□□□□ -1.9
SEC28YIL076W TFB1P32776 642 aa3.19□□□□□ -1.9
SEC28YIL076W HAC1P41546 238 aa3.19□□□□□ -1.9
SEC28YIL076W AIM24P47127 394 aa3.19□□□□□ -1.9
SEC28YIL076W MKC7P53379 596 aa3.19□□□□□ -1.9
SEC28YIL076W STD1Q02794 444 aa3.19□□□□□ -1.9
SEC28YIL076W YMR155WQ03795 547 aa3.19□□□□□ -1.9
SEC28YIL076W ECM11Q04110 302 aa3.19□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 111.2 ms