RNA–Protein interactions for RNA: ENST00000635227.1

LINC01108-202, Transcript of long intergenic non-protein coding RNA 1108, humanhuman

TSL 3 BASIC

Gene LINC01108, Length 776 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01108-202ENST00000635227 TRAF6Q9Y4K3 522 aa9.47□□□□□ -0.89
LINC01108-202ENST00000635227 HCFC2Q9Y5Z7 792 aa9.47□□□□□ -0.89
LINC01108-202ENST00000635227 DHX29Q7Z478 1369 aaKnown RBP9.47□□□□□ -0.89
LINC01108-202ENST00000635227 UTRNP46939 3433 aa9.46□□□□□ -0.89
LINC01108-202ENST00000635227 CLTCQ00610 1675 aaKnown RBP9.46□□□□□ -0.89
LINC01108-202ENST00000635227 NTRK1P04629 796 aa9.46□□□□□ -0.9
LINC01108-202ENST00000635227 CYBBP04839 570 aa9.46□□□□□ -0.9
LINC01108-202ENST00000635227 LSAMPQ13449 338 aa9.46□□□□□ -0.9
LINC01108-202ENST00000635227 ZC3H12BQ5HYM0 836 aaKnown RBP9.46□□□□□ -0.9
LINC01108-202ENST00000635227 PAQR3Q6TCH7 311 aa9.46□□□□□ -0.9
LINC01108-202ENST00000635227 RSPO2Q6UXX9 243 aaPredicted RBP9.46□□□□□ -0.9
LINC01108-202ENST00000635227 ZSWIM2Q8NEG5 633 aa9.46□□□□□ -0.9
LINC01108-202ENST00000635227 CHAMP1Q96JM3 812 aa9.46□□□□□ -0.9
LINC01108-202ENST00000635227 CARD11Q9BXL7 1154 aa9.46□□□□□ -0.9
LINC01108-202ENST00000635227 MCOLN1Q9GZU1 580 aa9.46□□□□□ -0.9
LINC01108-202ENST00000635227 AFF2P51816 1311 aa9.46□□□□□ -0.9
LINC01108-202ENST00000635227 KTN1Q86UP2 1357 aaKnown RBP9.46□□□□□ -0.9
LINC01108-202ENST00000635227 NPHP4O75161 1426 aaPredicted RBP9.46□□□□□ -0.9
LINC01108-202ENST00000635227 SHPRHQ149N8 1683 aa9.45□□□□□ -0.9
LINC01108-202ENST00000635227 ZC3H12DA2A288 527 aaKnown RBP9.45□□□□□ -0.9
LINC01108-202ENST00000635227 VIPR1P32241 457 aa9.45□□□□□ -0.9
LINC01108-202ENST00000635227 GTF2A2P52657 109 aa9.45□□□□□ -0.9
LINC01108-202ENST00000635227 CBX2Q14781 532 aaPredicted RBP9.45□□□□□ -0.9
LINC01108-202ENST00000635227 PLEKHN1Q494U1 663 aaPredicted RBP9.45□□□□□ -0.9
LINC01108-202ENST00000635227 ZNF648Q5T619 568 aaPredicted RBP9.45□□□□□ -0.9
LINC01108-202ENST00000635227 WWC2Q6AWC2 1192 aa9.45□□□□□ -0.9
LINC01108-202ENST00000635227 CABP7Q86V35 215 aa9.45□□□□□ -0.9
LINC01108-202ENST00000635227 Q8N1Y9 231 aa9.45□□□□□ -0.9
LINC01108-202ENST00000635227 FBXO15Q8NCQ5 510 aaPredicted RBP9.45□□□□□ -0.9
LINC01108-202ENST00000635227 TMEM169Q96HH4 297 aa9.45□□□□□ -0.9
LINC01108-202ENST00000635227 RNPC3Q96LT9 517 aaKnown RBP9.45□□□□□ -0.9
LINC01108-202ENST00000635227 PPARGC1AQ9UBK2 798 aaKnown RBP9.45□□□□□ -0.9
LINC01108-202ENST00000635227 KIF7Q2M1P5 1343 aa9.45□□□□□ -0.9
LINC01108-202ENST00000635227 GPRASP1Q5JY77 1395 aa9.45□□□□□ -0.9
LINC01108-202ENST00000635227 F8W031 263 aaPredicted RBP9.44□□□□□ -0.9
LINC01108-202ENST00000635227 FARP2O94887 1054 aaPredicted RBP9.44□□□□□ -0.9
LINC01108-202ENST00000635227 NR1I3Q14994 352 aa9.44□□□□□ -0.9
LINC01108-202ENST00000635227 TRMT2BQ96GJ1 504 aaKnown RBP9.44□□□□□ -0.9
LINC01108-202ENST00000635227 CDIP1Q9H305 208 aa9.44□□□□□ -0.9
LINC01108-202ENST00000635227 CLDND1Q9NY35 253 aa9.44□□□□□ -0.9
LINC01108-202ENST00000635227 SIT1Q9Y3P8 196 aa9.44□□□□□ -0.9
LINC01108-202ENST00000635227 HRKO00198 91 aa9.43□□□□□ -0.9
LINC01108-202ENST00000635227 PEX10O60683 326 aa9.43□□□□□ -0.9
LINC01108-202ENST00000635227 PRELPP51888 382 aa9.43□□□□□ -0.9
LINC01108-202ENST00000635227 SRSF3P84103 164 aaKnown RBP9.43□□□□□ -0.9
LINC01108-202ENST00000635227 GGT6Q6P531 493 aa9.43□□□□□ -0.9
LINC01108-202ENST00000635227 LBX2Q6XYB7 198 aa9.43□□□□□ -0.9
LINC01108-202ENST00000635227 POU5F2Q8N7G0 328 aa9.43□□□□□ -0.9
LINC01108-202ENST00000635227 PTPRN2Q92932 1015 aa9.43□□□□□ -0.9
LINC01108-202ENST00000635227 ZFYVE21Q9BQ24 234 aa9.43□□□□□ -0.9
LINC01108-202ENST00000635227 X6R8D5 127 aa9.43□□□□□ -0.9
LINC01108-202ENST00000635227 MYOM2P54296 1465 aa9.42□□□□□ -0.9
LINC01108-202ENST00000635227 EIF3AQ14152 1382 aaKnown RBP9.42□□□□□ -0.9
LINC01108-202ENST00000635227 ABLIM1O14639 778 aa9.42□□□□□ -0.9
LINC01108-202ENST00000635227 MAPKAPK2P49137 400 aa9.42□□□□□ -0.9
LINC01108-202ENST00000635227 GPR85P60893 370 aa9.42□□□□□ -0.9
LINC01108-202ENST00000635227 TMC6Q7Z403 805 aa9.42□□□□□ -0.9
LINC01108-202ENST00000635227 JAZF1Q86VZ6 243 aa9.42□□□□□ -0.9
LINC01108-202ENST00000635227 ANKLE2Q86XL3 938 aa9.42□□□□□ -0.9
LINC01108-202ENST00000635227 IFNL3Q8IZI9 196 aa9.42□□□□□ -0.9
LINC01108-202ENST00000635227 NETO2Q8NC67 525 aa9.42□□□□□ -0.9
LINC01108-202ENST00000635227 FAM84AQ96KN4 292 aa9.42□□□□□ -0.9
LINC01108-202ENST00000635227 SGPP1Q9BX95 441 aa9.42□□□□□ -0.9
LINC01108-202ENST00000635227 DBR1Q9UK59 544 aaKnown RBP9.42□□□□□ -0.9
LINC01108-202ENST00000635227 PLA2G2DQ9UNK4 145 aa9.42□□□□□ -0.9
LINC01108-202ENST00000635227 MRPL42Q9Y6G3 142 aaKnown RBP9.42□□□□□ -0.9
LINC01108-202ENST00000635227 KDM5AP29375 1690 aaKnown RBP9.42□□□□□ -0.9
LINC01108-202ENST00000635227 ESYT3A0FGR9 886 aa9.41□□□□□ -0.9
LINC01108-202ENST00000635227 H7BY64 318 aa9.41□□□□□ -0.9
LINC01108-202ENST00000635227 KIF3BO15066 747 aa9.41□□□□□ -0.9
LINC01108-202ENST00000635227 GABREP78334 506 aa9.41□□□□□ -0.9
LINC01108-202ENST00000635227 PRR5P85299 388 aa9.41□□□□□ -0.9
LINC01108-202ENST00000635227 TMEM62Q0P6H9 643 aa9.41□□□□□ -0.9
LINC01108-202ENST00000635227 ZC3H14Q6PJT7 736 aaKnown RBP9.41□□□□□ -0.9
LINC01108-202ENST00000635227 SYDE1Q6ZW31 735 aaPredicted RBP9.41□□□□□ -0.9
LINC01108-202ENST00000635227 MAMDC2Q7Z304 686 aaPredicted RBP9.41□□□□□ -0.9
LINC01108-202ENST00000635227 DEFB132Q7Z7B7 95 aa9.41□□□□□ -0.9
LINC01108-202ENST00000635227 MBD1Q9UIS9 605 aaPredicted RBP9.41□□□□□ -0.9
LINC01108-202ENST00000635227 PPLO60437 1756 aa9.41□□□□□ -0.9
LINC01108-202ENST00000635227 TEX51A0A1B0GUA7 166 aa9.4□□□□□ -0.9
LINC01108-202ENST00000635227 MROH9Q5TGP6 573 aa9.4□□□□□ -0.9
LINC01108-202ENST00000635227 TMEM132EQ6IEE7 984 aa9.4□□□□□ -0.9
LINC01108-202ENST00000635227 RIOX2Q8IUF8 465 aa9.4□□□□□ -0.9
LINC01108-202ENST00000635227 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.4□□□□□ -0.9
LINC01108-202ENST00000635227 JAM3Q9BX67 310 aa9.4□□□□□ -0.9
LINC01108-202ENST00000635227 CNTD2Q9H8S5 307 aa9.4□□□□□ -0.9
LINC01108-202ENST00000635227 SLC52A2Q9HAB3 445 aa9.4□□□□□ -0.9
LINC01108-202ENST00000635227 TMEM260Q9NX78 707 aa9.4□□□□□ -0.9
LINC01108-202ENST00000635227 CCDC163A0A0D9SF12 145 aa9.39□□□□□ -0.91
LINC01108-202ENST00000635227 RBM10P98175 930 aaKnown RBP9.39□□□□□ -0.91
LINC01108-202ENST00000635227 ZNF200P98182 395 aaPredicted RBP9.39□□□□□ -0.91
LINC01108-202ENST00000635227 OLFML2BQ68BL8 750 aa9.39□□□□□ -0.91
LINC01108-202ENST00000635227 NOP9Q86U38 636 aaKnown RBP9.39□□□□□ -0.91
LINC01108-202ENST00000635227 KCNN1Q92952 543 aa9.39□□□□□ -0.91
LINC01108-202ENST00000635227 BCAS3Q9H6U6 928 aa9.39□□□□□ -0.91
LINC01108-202ENST00000635227 PRKRIP1Q9H875 184 aaPredicted RBP9.39□□□□□ -0.91
LINC01108-202ENST00000635227 NCOA5Q9HCD5 579 aaKnown RBP9.39□□□□□ -0.91
LINC01108-202ENST00000635227 GCM1Q9NP62 436 aa9.39□□□□□ -0.91
LINC01108-202ENST00000635227 SIRT5Q9NXA8 310 aa9.39□□□□□ -0.91
LINC01108-202ENST00000635227 NDOR1Q9UHB4 597 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 1376.5 ms