RNA–Protein interactions for RNA: ENST00000565832.5

CHD9-217, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 2,169 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-217ENST00000565832 KIAA1024Q9UPX6 916 aa6.98□□□□□ -1.29
CHD9-217ENST00000565832 MRPL11Q9Y3B7 192 aaKnown RBP6.98□□□□□ -1.29
CHD9-217ENST00000565832 RLFQ13129 1914 aa6.98□□□□□ -1.29
CHD9-217ENST00000565832 COL11A1P12107 1806 aaPredicted RBP6.98□□□□□ -1.29
CHD9-217ENST00000565832 NPHP3-ACAD11A0A0J9YXS1 232 aa6.98□□□□□ -1.29
CHD9-217ENST00000565832 MYMKA6NI61 221 aa6.98□□□□□ -1.29
CHD9-217ENST00000565832 ESPNB1AK53 854 aa6.98□□□□□ -1.29
CHD9-217ENST00000565832 EML1O00423 815 aa6.98□□□□□ -1.29
CHD9-217ENST00000565832 KLRC4O43908 158 aa6.98□□□□□ -1.29
CHD9-217ENST00000565832 MED24O75448 989 aa6.98□□□□□ -1.29
CHD9-217ENST00000565832 SMC2O95347 1197 aa6.98□□□□□ -1.29
CHD9-217ENST00000565832 F12P00748 615 aaPredicted RBP6.98□□□□□ -1.29
CHD9-217ENST00000565832 FOSP01100 380 aaPredicted RBP6.98□□□□□ -1.29
CHD9-217ENST00000565832 FCER1AP12319 257 aa6.98□□□□□ -1.29
CHD9-217ENST00000565832 ITGB5P18084 799 aa6.98□□□□□ -1.29
CHD9-217ENST00000565832 PRCPP42785 496 aa6.98□□□□□ -1.29
CHD9-217ENST00000565832 RPS6P62753 249 aaKnown RBP6.98□□□□□ -1.29
CHD9-217ENST00000565832 CYP4A11Q02928 519 aa6.98□□□□□ -1.29
CHD9-217ENST00000565832 SPIRE1Q08AE8 756 aa6.98□□□□□ -1.29
CHD9-217ENST00000565832 DOCK1Q14185 1865 aa6.98□□□□□ -1.29
CHD9-217ENST00000565832 PLS1Q14651 629 aa6.98□□□□□ -1.29
CHD9-217ENST00000565832 TMEM132BQ14DG7 1078 aa6.98□□□□□ -1.29
CHD9-217ENST00000565832 C17orf53Q8N3J3 647 aaPredicted RBP6.98□□□□□ -1.29
CHD9-217ENST00000565832 CDCA5Q96FF9 252 aa6.98□□□□□ -1.29
CHD9-217ENST00000565832 TAAR1Q96RJ0 339 aa6.98□□□□□ -1.29
CHD9-217ENST00000565832 BPIFA3Q9BQP9 254 aa6.98□□□□□ -1.29
CHD9-217ENST00000565832 KRTAP3-3Q9BYR6 98 aa6.98□□□□□ -1.29
CHD9-217ENST00000565832 KRTAP3-2Q9BYR7 98 aa6.98□□□□□ -1.29
CHD9-217ENST00000565832 WDR11Q9BZH6 1224 aa6.98□□□□□ -1.29
CHD9-217ENST00000565832 XPO4Q9C0E2 1151 aaKnown RBP6.98□□□□□ -1.29
CHD9-217ENST00000565832 TAF1DQ9H5J8 278 aaPredicted RBP6.98□□□□□ -1.29
CHD9-217ENST00000565832 ZNF408Q9H9D4 720 aa6.98□□□□□ -1.29
CHD9-217ENST00000565832 RGL1Q9NZL6 768 aa6.98□□□□□ -1.29
CHD9-217ENST00000565832 IFNKQ9P0W0 207 aa6.98□□□□□ -1.29
CHD9-217ENST00000565832 NFE2L3Q9Y4A8 694 aa6.98□□□□□ -1.29
CHD9-217ENST00000565832 CHMP2AO43633 222 aa6.97□□□□□ -1.29
CHD9-217ENST00000565832 PPP1R12BO60237 982 aaPredicted RBP6.97□□□□□ -1.29
CHD9-217ENST00000565832 SSBP05455 408 aaKnown RBP eCLIP6.97□□□□□ -1.29
CHD9-217ENST00000565832 JUNDP17535 347 aa6.97□□□□□ -1.29
CHD9-217ENST00000565832 EIF2AK2P19525 551 aaKnown RBP6.97□□□□□ -1.29
CHD9-217ENST00000565832 PTGS1P23219 599 aa6.97□□□□□ -1.29
CHD9-217ENST00000565832 CCT6AP40227 531 aaKnown RBP6.97□□□□□ -1.29
CHD9-217ENST00000565832 PMS1P54277 932 aaKnown RBP6.97□□□□□ -1.29
CHD9-217ENST00000565832 USP14P54578 494 aa6.97□□□□□ -1.29
CHD9-217ENST00000565832 MYL5Q02045 173 aa6.97□□□□□ -1.29
CHD9-217ENST00000565832 LRMPQ12912 555 aa6.97□□□□□ -1.29
CHD9-217ENST00000565832 STK4Q13043 487 aa6.97□□□□□ -1.29
CHD9-217ENST00000565832 COG2Q14746 738 aa6.97□□□□□ -1.29
CHD9-217ENST00000565832 TMEM266Q2M3C6 531 aa6.97□□□□□ -1.29
CHD9-217ENST00000565832 Q4G0T1 1027 aa6.97□□□□□ -1.29
CHD9-217ENST00000565832 KRT79Q5XKE5 535 aa6.97□□□□□ -1.29
CHD9-217ENST00000565832 NCAPH2Q6IBW4 605 aa6.97□□□□□ -1.29
CHD9-217ENST00000565832 SNRNP48Q6IEG0 339 aaKnown RBP6.97□□□□□ -1.29
CHD9-217ENST00000565832 POTEGQ6S5H5 508 aa6.97□□□□□ -1.29
CHD9-217ENST00000565832 NSMFQ6X4W1 530 aa6.97□□□□□ -1.29
CHD9-217ENST00000565832 CATSPERGQ6ZRH7 1159 aa6.97□□□□□ -1.29
CHD9-217ENST00000565832 CCDC186Q7Z3E2 898 aa6.97□□□□□ -1.29
CHD9-217ENST00000565832 CATSPER3Q86XQ3 398 aa6.97□□□□□ -1.29
CHD9-217ENST00000565832 CREBRFQ8IUR6 639 aa6.97□□□□□ -1.29
CHD9-217ENST00000565832 MLKLQ8NB16 471 aa6.97□□□□□ -1.29
CHD9-217ENST00000565832 GLIS3Q8NEA6 775 aa6.97□□□□□ -1.29
CHD9-217ENST00000565832 CALML4Q96GE6 196 aa6.97□□□□□ -1.29
CHD9-217ENST00000565832 MBOAT7Q96N66 472 aa6.97□□□□□ -1.29
CHD9-217ENST00000565832 UCN2Q96RP3 112 aa6.97□□□□□ -1.29
CHD9-217ENST00000565832 PPP1R12CQ9BZL4 782 aa6.97□□□□□ -1.29
CHD9-217ENST00000565832 TRIM9Q9C026 710 aa6.97□□□□□ -1.29
CHD9-217ENST00000565832 KCNF1Q9H3M0 494 aa6.97□□□□□ -1.29
CHD9-217ENST00000565832 AS3MTQ9HBK9 375 aa6.97□□□□□ -1.29
CHD9-217ENST00000565832 PPP2R3BQ9Y5P8 575 aa6.97□□□□□ -1.29
CHD9-217ENST00000565832 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.97□□□□□ -1.293e-6■■□□□ 12.1
CHD9-217ENST00000565832 ABCB11O95342 1321 aa6.97□□□□□ -1.29
CHD9-217ENST00000565832 PITPNM2Q9BZ72 1349 aa6.97□□□□□ -1.29
CHD9-217ENST00000565832 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.96□□□□□ -1.29
CHD9-217ENST00000565832 TRIM49BA6NDI0 452 aa6.96□□□□□ -1.29
CHD9-217ENST00000565832 C19orf81C9J6K1 198 aa6.96□□□□□ -1.29
CHD9-217ENST00000565832 IKBKBO14920 756 aa6.96□□□□□ -1.29
CHD9-217ENST00000565832 ZBED4O75132 1171 aa6.96□□□□□ -1.29
CHD9-217ENST00000565832 CYP3A4P08684 503 aa6.96□□□□□ -1.29
CHD9-217ENST00000565832 SPATA31C1P0DKV0 1188 aa6.96□□□□□ -1.29
CHD9-217ENST00000565832 GCFC2P16383 781 aaKnown RBP6.96□□□□□ -1.29
CHD9-217ENST00000565832 CIITAP33076 1130 aa6.96□□□□□ -1.29
CHD9-217ENST00000565832 HSD17B4P51659 736 aa6.96□□□□□ -1.29
CHD9-217ENST00000565832 MRPS9P82933 396 aaKnown RBP6.96□□□□□ -1.29
CHD9-217ENST00000565832 FANCCQ00597 558 aa6.96□□□□□ -1.29
CHD9-217ENST00000565832 BAATQ14032 418 aaPredicted RBP6.96□□□□□ -1.29
CHD9-217ENST00000565832 PTPRNQ16849 979 aa6.96□□□□□ -1.29
CHD9-217ENST00000565832 CEP55Q53EZ4 464 aa6.96□□□□□ -1.29
CHD9-217ENST00000565832 THSD4Q6ZMP0 1018 aa6.96□□□□□ -1.29
CHD9-217ENST00000565832 USP50Q70EL3 339 aaPredicted RBP6.96□□□□□ -1.29
CHD9-217ENST00000565832 TRMT1LQ7Z2T5 733 aaKnown RBP6.96□□□□□ -1.29
CHD9-217ENST00000565832 FILIP1Q7Z7B0 1213 aa6.96□□□□□ -1.29
CHD9-217ENST00000565832 FAM160A2Q8N612 972 aaPredicted RBP6.96□□□□□ -1.29
CHD9-217ENST00000565832 REPS2Q8NFH8 660 aa6.96□□□□□ -1.29
CHD9-217ENST00000565832 SYTL5Q8TDW5 730 aaPredicted RBP6.96□□□□□ -1.29
CHD9-217ENST00000565832 ZNF214Q9UL59 606 aaPredicted RBP6.96□□□□□ -1.29
CHD9-217ENST00000565832 CTNND2Q9UQB3 1225 aa6.96□□□□□ -1.29
CHD9-217ENST00000565832 CTDP1Q9Y5B0 961 aaPredicted RBP6.96□□□□□ -1.29
CHD9-217ENST00000565832 SMTNL1A8MU46 457 aa6.96□□□□□ -1.3
CHD9-217ENST00000565832 DDX39AO00148 427 aaKnown RBP6.96□□□□□ -1.3
CHD9-217ENST00000565832 NKRFO15226 690 aaKnown RBP eCLIP6.96□□□□□ -1.31e-6■■□□□ 11.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms