RNA–Protein interactions for RNA: ENST00000558655.5

ZEB1-212, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 2

Gene ZEB1, Length 2,773 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-212ENST00000558655 COG2Q14746 738 aa4.61□□□□□ -1.67
ZEB1-212ENST00000558655 TOMM20Q15388 145 aa4.61□□□□□ -1.67
ZEB1-212ENST00000558655 FERMT3Q86UX7 667 aa4.61□□□□□ -1.67
ZEB1-212ENST00000558655 TRIM22Q8IYM9 498 aa4.61□□□□□ -1.67
ZEB1-212ENST00000558655 ADGRF4Q8IZF3 695 aa4.61□□□□□ -1.67
ZEB1-212ENST00000558655 RRP36Q96EU6 259 aaKnown RBP4.61□□□□□ -1.67
ZEB1-212ENST00000558655 MYL10Q9BUA6 226 aa4.61□□□□□ -1.67
ZEB1-212ENST00000558655 RETREG1Q9H6L5 497 aa4.61□□□□□ -1.67
ZEB1-212ENST00000558655 EFCC1Q9HA90 598 aa4.61□□□□□ -1.67
ZEB1-212ENST00000558655 NCOA5Q9HCD5 579 aaKnown RBP4.61□□□□□ -1.67
ZEB1-212ENST00000558655 BARHL2Q9NY43 387 aa4.61□□□□□ -1.67
ZEB1-212ENST00000558655 HOXC10Q9NYD6 342 aa4.61□□□□□ -1.67
ZEB1-212ENST00000558655 CNPY2Q9Y2B0 182 aa4.61□□□□□ -1.67
ZEB1-212ENST00000558655 CUL9Q8IWT3 2517 aa4.61□□□□□ -1.67
ZEB1-212ENST00000558655 KMT2BQ9UMN6 2715 aaPredicted RBP4.61□□□□□ -1.67
ZEB1-212ENST00000558655 TMEM8BA6NDV4 472 aa4.61□□□□□ -1.67
ZEB1-212ENST00000558655 TMEM232C9JQI7 657 aa4.61□□□□□ -1.67
ZEB1-212ENST00000558655 STXBP3O00186 592 aa4.61□□□□□ -1.67
ZEB1-212ENST00000558655 PIK3CDO00329 1044 aa4.61□□□□□ -1.67
ZEB1-212ENST00000558655 FIBPO43427 364 aa4.61□□□□□ -1.67
ZEB1-212ENST00000558655 RNASEH2AO75792 299 aaKnown RBP4.61□□□□□ -1.67
ZEB1-212ENST00000558655 CNMDO75829 334 aa4.61□□□□□ -1.67
ZEB1-212ENST00000558655 FARP2O94887 1054 aaPredicted RBP4.61□□□□□ -1.67
ZEB1-212ENST00000558655 NDUFV2P19404 249 aa4.61□□□□□ -1.67
ZEB1-212ENST00000558655 OSBPP22059 807 aa4.61□□□□□ -1.67
ZEB1-212ENST00000558655 ZNF157P51786 506 aaPredicted RBP4.61□□□□□ -1.67
ZEB1-212ENST00000558655 CCT2P78371 535 aaKnown RBP4.61□□□□□ -1.67
ZEB1-212ENST00000558655 NPY5RQ15761 445 aa4.61□□□□□ -1.67
ZEB1-212ENST00000558655 UVSSAQ2YD98 709 aa4.61□□□□□ -1.67
ZEB1-212ENST00000558655 CCDC92Q53HC0 331 aaPredicted RBP4.61□□□□□ -1.67
ZEB1-212ENST00000558655 ARSIQ5FYB1 569 aa4.61□□□□□ -1.67
ZEB1-212ENST00000558655 TREML2Q5T2D2 321 aa4.61□□□□□ -1.67
ZEB1-212ENST00000558655 MYSM1Q5VVJ2 828 aa4.61□□□□□ -1.67
ZEB1-212ENST00000558655 LARP1BQ659C4 914 aaKnown RBP4.61□□□□□ -1.67
ZEB1-212ENST00000558655 TTBK2Q6IQ55 1244 aa4.61□□□□□ -1.67
ZEB1-212ENST00000558655 POTEEQ6S8J3 1075 aa4.61□□□□□ -1.67
ZEB1-212ENST00000558655 CCDC84Q86UT8 332 aaPredicted RBP4.61□□□□□ -1.67
ZEB1-212ENST00000558655 NUP133Q8WUM0 1156 aa4.61□□□□□ -1.67
ZEB1-212ENST00000558655 TNFRSF25Q93038 417 aa4.61□□□□□ -1.67
ZEB1-212ENST00000558655 PHF20Q9BVI0 1012 aa4.61□□□□□ -1.67
ZEB1-212ENST00000558655 UBE2OQ9C0C9 1292 aaKnown RBP4.61□□□□□ -1.67
ZEB1-212ENST00000558655 ZMYND12Q9H0C1 365 aa4.61□□□□□ -1.67
ZEB1-212ENST00000558655 SEMA4AQ9H3S1 761 aa4.61□□□□□ -1.67
ZEB1-212ENST00000558655 PPCSQ9HAB8 311 aa4.61□□□□□ -1.67
ZEB1-212ENST00000558655 NOL7Q9UMY1 257 aaKnown RBP4.61□□□□□ -1.67
ZEB1-212ENST00000558655 SMC3Q9UQE7 1217 aa4.61□□□□□ -1.67
ZEB1-212ENST00000558655 FRMPD2Q68DX3 1309 aaPredicted RBP4.61□□□□□ -1.67
ZEB1-212ENST00000558655 FRMPD3Q5JV73 1810 aa4.61□□□□□ -1.67
ZEB1-212ENST00000558655 CCL15-CCL14A0A0B4J2E2 113 aa4.6□□□□□ -1.67
ZEB1-212ENST00000558655 TRIM75PA6NK02 468 aa4.6□□□□□ -1.67
ZEB1-212ENST00000558655 BTBD19C9JJ37 291 aa4.6□□□□□ -1.67
ZEB1-212ENST00000558655 VWA5AO00534 786 aa4.6□□□□□ -1.67
ZEB1-212ENST00000558655 CPLX1O14810 134 aa4.6□□□□□ -1.67
ZEB1-212ENST00000558655 JAK2O60674 1132 aa4.6□□□□□ -1.67
ZEB1-212ENST00000558655 PPP1R11O60927 126 aaPredicted RBP4.6□□□□□ -1.67
ZEB1-212ENST00000558655 GJB2P29033 226 aa4.6□□□□□ -1.67
ZEB1-212ENST00000558655 SSR1P43307 286 aaKnown RBP4.6□□□□□ -1.67
ZEB1-212ENST00000558655 CLK2P49760 499 aaKnown RBP4.6□□□□□ -1.67
ZEB1-212ENST00000558655 PSMD2Q13200 908 aa4.6□□□□□ -1.67
ZEB1-212ENST00000558655 PRKG1Q13976 671 aa4.6□□□□□ -1.67
ZEB1-212ENST00000558655 CDC37Q16543 378 aaPredicted RBP4.6□□□□□ -1.67
ZEB1-212ENST00000558655 CCL15Q16663 113 aa4.6□□□□□ -1.67
ZEB1-212ENST00000558655 QRICH1Q2TAL8 776 aa4.6□□□□□ -1.67
ZEB1-212ENST00000558655 KLHL40Q2TBA0 621 aa4.6□□□□□ -1.67
ZEB1-212ENST00000558655 OTUD7BQ6GQQ9 843 aa4.6□□□□□ -1.67
ZEB1-212ENST00000558655 CLEC17AQ6ZS10 378 aa4.6□□□□□ -1.67
ZEB1-212ENST00000558655 KCTD1Q719H9 257 aa4.6□□□□□ -1.67
ZEB1-212ENST00000558655 RASGRP2Q7LDG7 609 aa4.6□□□□□ -1.67
ZEB1-212ENST00000558655 RIOX2Q8IUF8 465 aa4.6□□□□□ -1.67
ZEB1-212ENST00000558655 CCDC148Q8NFR7 591 aa4.6□□□□□ -1.67
ZEB1-212ENST00000558655 FBXO18Q8NFZ0 1043 aa4.6□□□□□ -1.67
ZEB1-212ENST00000558655 CCDC12Q8WUD4 166 aaPredicted RBP4.6□□□□□ -1.67
ZEB1-212ENST00000558655 CNTNAP3BQ96NU0 1288 aa4.6□□□□□ -1.67
ZEB1-212ENST00000558655 PTPN18Q99952 460 aa4.6□□□□□ -1.67
ZEB1-212ENST00000558655 AMNQ9BXJ7 453 aa4.6□□□□□ -1.67
ZEB1-212ENST00000558655 CNTNAP3Q9BZ76 1288 aa4.6□□□□□ -1.67
ZEB1-212ENST00000558655 ASCC2Q9H1I8 757 aaPredicted RBP4.6□□□□□ -1.67
ZEB1-212ENST00000558655 ZNF408Q9H9D4 720 aa4.6□□□□□ -1.67
ZEB1-212ENST00000558655 PTPRHQ9HD43 1115 aa4.6□□□□□ -1.67
ZEB1-212ENST00000558655 GPCPD1Q9NPB8 672 aa4.6□□□□□ -1.67
ZEB1-212ENST00000558655 ORC3Q9UBD5 711 aaPredicted RBP4.6□□□□□ -1.67
ZEB1-212ENST00000558655 ZNF214Q9UL59 606 aaPredicted RBP4.6□□□□□ -1.67
ZEB1-212ENST00000558655 RABGAP1Q9Y3P9 1069 aa4.6□□□□□ -1.67
ZEB1-212ENST00000558655 PLXNA3P51805 1871 aa4.6□□□□□ -1.67
ZEB1-212ENST00000558655 ZSWIM8A7E2V4 1837 aa4.6□□□□□ -1.67
ZEB1-212ENST00000558655 ESPNB1AK53 854 aa4.6□□□□□ -1.67
ZEB1-212ENST00000558655 ZBED4O75132 1171 aa4.6□□□□□ -1.67
ZEB1-212ENST00000558655 BCRP11274 1271 aa4.6□□□□□ -1.67
ZEB1-212ENST00000558655 RXRAP19793 462 aa4.6□□□□□ -1.67
ZEB1-212ENST00000558655 POU3F3P20264 500 aaPredicted RBP4.6□□□□□ -1.67
ZEB1-212ENST00000558655 U2AF2P26368 475 aaKnown RBP eCLIP4.6□□□□□ -1.677e-7■■■■■ 29.9
ZEB1-212ENST00000558655 CALML3P27482 149 aa4.6□□□□□ -1.67
ZEB1-212ENST00000558655 HERVK_113P62684 666 aa4.6□□□□□ -1.67
ZEB1-212ENST00000558655 NUCB2P80303 420 aa4.6□□□□□ -1.67
ZEB1-212ENST00000558655 ZBED6P86452 979 aa4.6□□□□□ -1.67
ZEB1-212ENST00000558655 ATP2B2Q01814 1243 aa4.6□□□□□ -1.67
ZEB1-212ENST00000558655 ORC2Q13416 577 aaPredicted RBP4.6□□□□□ -1.67
ZEB1-212ENST00000558655 LRRC41Q15345 812 aa4.6□□□□□ -1.67
ZEB1-212ENST00000558655 SLC9C1Q4G0N8 1177 aa4.6□□□□□ -1.67
ZEB1-212ENST00000558655 WWC2Q6AWC2 1192 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms