RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 KIAA1671Q9BY89 1806 aa7.58□□□□□ -1.2
SLIRP-203ENST00000554074 SPDYE3A6NKU9 549 aa7.58□□□□□ -1.2
SLIRP-203ENST00000554074 TREHO43280 583 aa7.58□□□□□ -1.2
SLIRP-203ENST00000554074 SORBS3O60504 671 aa7.58□□□□□ -1.2
SLIRP-203ENST00000554074 CDC45O75419 566 aa7.58□□□□□ -1.2
SLIRP-203ENST00000554074 FOSP01100 380 aaPredicted RBP7.58□□□□□ -1.2
SLIRP-203ENST00000554074 RPLP2P05387 115 aaKnown RBP7.58□□□□□ -1.2
SLIRP-203ENST00000554074 KCNA2P16389 499 aa7.58□□□□□ -1.2
SLIRP-203ENST00000554074 ITGB5P18084 799 aa7.58□□□□□ -1.2
SLIRP-203ENST00000554074 RXRAP19793 462 aa7.58□□□□□ -1.2
SLIRP-203ENST00000554074 DEFB103AP81534 67 aa7.58□□□□□ -1.2
SLIRP-203ENST00000554074 MTMR1Q13613 665 aa7.58□□□□□ -1.2
SLIRP-203ENST00000554074 RTN1Q16799 776 aa7.58□□□□□ -1.2
SLIRP-203ENST00000554074 AAK1Q2M2I8 961 aa7.58□□□□□ -1.2
SLIRP-203ENST00000554074 TCTN1Q2MV58 587 aa7.58□□□□□ -1.2
SLIRP-203ENST00000554074 FAM26DQ5JW98 314 aa7.58□□□□□ -1.2
SLIRP-203ENST00000554074 TAF2Q6P1X5 1199 aa7.58□□□□□ -1.2
SLIRP-203ENST00000554074 MICU3Q86XE3 530 aa7.58□□□□□ -1.2
SLIRP-203ENST00000554074 CMTR1Q8N1G2 835 aaKnown RBP7.58□□□□□ -1.2
SLIRP-203ENST00000554074 SEPT1Q8WYJ6 367 aa7.58□□□□□ -1.2
SLIRP-203ENST00000554074 APBB2Q92870 758 aa7.58□□□□□ -1.2
SLIRP-203ENST00000554074 KCNB2Q92953 911 aa7.58□□□□□ -1.2
SLIRP-203ENST00000554074 ZBED2Q9BTP6 218 aa7.58□□□□□ -1.2
SLIRP-203ENST00000554074 GLT8D2Q9H1C3 349 aa7.58□□□□□ -1.2
SLIRP-203ENST00000554074 BCAS3Q9H6U6 928 aa7.58□□□□□ -1.2
SLIRP-203ENST00000554074 JADE2Q9NQC1 790 aa7.58□□□□□ -1.2
SLIRP-203ENST00000554074 PRDM6Q9NQX0 595 aa7.58□□□□□ -1.2
SLIRP-203ENST00000554074 INSL6Q9Y581 213 aa7.58□□□□□ -1.2
SLIRP-203ENST00000554074 MTCH2Q9Y6C9 303 aa7.58□□□□□ -1.2
SLIRP-203ENST00000554074 NFASCO94856 1347 aa7.57□□□□□ -1.2
SLIRP-203ENST00000554074 GSTTP1A0A1W2PQM5 241 aa7.57□□□□□ -1.2
SLIRP-203ENST00000554074 LCHNA4D1U4 455 aa7.57□□□□□ -1.2
SLIRP-203ENST00000554074 MBLAC1A4D2B0 266 aaPredicted RBP7.57□□□□□ -1.2
SLIRP-203ENST00000554074 EPOPA6NHQ4 379 aa7.57□□□□□ -1.2
SLIRP-203ENST00000554074 ZBTB43O43298 467 aa7.57□□□□□ -1.2
SLIRP-203ENST00000554074 LPXNO60711 386 aa7.57□□□□□ -1.2
SLIRP-203ENST00000554074 ATP9AO75110 1047 aa7.57□□□□□ -1.2
SLIRP-203ENST00000554074 ARHGEF15O94989 841 aa7.57□□□□□ -1.2
SLIRP-203ENST00000554074 AMHP03971 560 aa7.57□□□□□ -1.2
SLIRP-203ENST00000554074 TCF7P36402 384 aaPredicted RBP7.57□□□□□ -1.2
SLIRP-203ENST00000554074 ERVK-21P61565 698 aa7.57□□□□□ -1.2
SLIRP-203ENST00000554074 HTRA4P83105 476 aaPredicted RBP7.57□□□□□ -1.2
SLIRP-203ENST00000554074 FUT2Q10981 343 aa7.57□□□□□ -1.2
SLIRP-203ENST00000554074 AP3B2Q13367 1082 aa7.57□□□□□ -1.2
SLIRP-203ENST00000554074 CCDC85BQ15834 202 aaPredicted RBP7.57□□□□□ -1.2
SLIRP-203ENST00000554074 WWC2Q6AWC2 1192 aa7.57□□□□□ -1.2
SLIRP-203ENST00000554074 HEATR3Q7Z4Q2 680 aa7.57□□□□□ -1.2
SLIRP-203ENST00000554074 TRIM50Q86XT4 487 aa7.57□□□□□ -1.2
SLIRP-203ENST00000554074 RASEFQ8IZ41 740 aa7.57□□□□□ -1.2
SLIRP-203ENST00000554074 FBXL16Q8N461 479 aa7.57□□□□□ -1.2
SLIRP-203ENST00000554074 DBF4BQ8NFT6 615 aa7.57□□□□□ -1.2
SLIRP-203ENST00000554074 SP7Q8TDD2 431 aaPredicted RBP7.57□□□□□ -1.2
SLIRP-203ENST00000554074 LMBR1Q8WVP7 490 aa7.57□□□□□ -1.2
SLIRP-203ENST00000554074 PPM1EQ8WY54 764 aa7.57□□□□□ -1.2
SLIRP-203ENST00000554074 ARNTL2Q8WYA1 636 aa7.57□□□□□ -1.2
SLIRP-203ENST00000554074 SEPT8Q92599 483 aa7.57□□□□□ -1.2
SLIRP-203ENST00000554074 TGS1Q96RS0 853 aaKnown RBP7.57□□□□□ -1.2
SLIRP-203ENST00000554074 LRRC2Q9BYS8 371 aa7.57□□□□□ -1.2
SLIRP-203ENST00000554074 SMARCAD1Q9H4L7 1026 aa7.57□□□□□ -1.2
SLIRP-203ENST00000554074 RIC8AQ9NPQ8 531 aa7.57□□□□□ -1.2
SLIRP-203ENST00000554074 SETD4Q9NVD3 440 aa7.57□□□□□ -1.2
SLIRP-203ENST00000554074 ERAP1Q9NZ08 941 aa7.57□□□□□ -1.2
SLIRP-203ENST00000554074 BRPF3Q9ULD4 1205 aa7.57□□□□□ -1.2
SLIRP-203ENST00000554074 PCDHA6Q9UN73 950 aa7.57□□□□□ -1.2
SLIRP-203ENST00000554074 COG5Q9UP83 839 aa7.57□□□□□ -1.2
SLIRP-203ENST00000554074 PCDHA8Q9Y5H6 950 aa7.57□□□□□ -1.2
SLIRP-203ENST00000554074 FNDC1Q4ZHG4 1894 aaPredicted RBP7.57□□□□□ -1.2
SLIRP-203ENST00000554074 NID2Q14112 1375 aa7.57□□□□□ -1.2
SLIRP-203ENST00000554074 CCDC196A0A1B0GTZ2 297 aa7.56□□□□□ -1.2
SLIRP-203ENST00000554074 hCG_1642624A0A1W2PR95 340 aa7.56□□□□□ -1.2
SLIRP-203ENST00000554074 ESYT2A0FGR8 921 aa7.56□□□□□ -1.2
SLIRP-203ENST00000554074 LINC01553A4QN01 128 aa7.56□□□□□ -1.2
SLIRP-203ENST00000554074 STXBP3O00186 592 aa7.56□□□□□ -1.2
SLIRP-203ENST00000554074 TNFRSF10AO00220 468 aa7.56□□□□□ -1.2
SLIRP-203ENST00000554074 EPB41L2O43491 1005 aaKnown RBP7.56□□□□□ -1.2
SLIRP-203ENST00000554074 SREBF1P36956 1147 aa7.56□□□□□ -1.2
SLIRP-203ENST00000554074 CLK2P49760 499 aaKnown RBP7.56□□□□□ -1.2
SLIRP-203ENST00000554074 ADCY7P51828 1080 aa7.56□□□□□ -1.2
SLIRP-203ENST00000554074 NAPAP54920 295 aa7.56□□□□□ -1.2
SLIRP-203ENST00000554074 ARHGAP4P98171 946 aa7.56□□□□□ -1.2
SLIRP-203ENST00000554074 GRB10Q13322 594 aa7.56□□□□□ -1.2
SLIRP-203ENST00000554074 UBE2SQ16763 222 aa7.56□□□□□ -1.2
SLIRP-203ENST00000554074 ADCK5Q3MIX3 580 aa7.56□□□□□ -1.2
SLIRP-203ENST00000554074 UTP14CQ5TAP6 766 aaKnown RBP7.56□□□□□ -1.2
SLIRP-203ENST00000554074 MCTP2Q6DN12 878 aa7.56□□□□□ -1.2
SLIRP-203ENST00000554074 TYW1BQ6NUM6 668 aa7.56□□□□□ -1.2
SLIRP-203ENST00000554074 FAM43BQ6ZT52 329 aaPredicted RBP7.56□□□□□ -1.2
SLIRP-203ENST00000554074 NIPA1Q7RTP0 329 aa7.56□□□□□ -1.2
SLIRP-203ENST00000554074 RAB11FIP4Q86YS3 637 aa7.56□□□□□ -1.2
SLIRP-203ENST00000554074 CCDC82Q8N4S0 544 aa7.56□□□□□ -1.2
SLIRP-203ENST00000554074 TNPO1Q92973 898 aaKnown RBP7.56□□□□□ -1.2
SLIRP-203ENST00000554074 TOP1MTQ969P6 601 aa7.56□□□□□ -1.2
SLIRP-203ENST00000554074 SAMD11Q96NU1 681 aa7.56□□□□□ -1.2
SLIRP-203ENST00000554074 MXRA8Q9BRK3 442 aa7.56□□□□□ -1.2
SLIRP-203ENST00000554074 CERS4Q9HA82 394 aa7.56□□□□□ -1.2
SLIRP-203ENST00000554074 SUGCTQ9HAC7 445 aa7.56□□□□□ -1.2
SLIRP-203ENST00000554074 JPH1Q9HDC5 661 aaPredicted RBP7.56□□□□□ -1.2
SLIRP-203ENST00000554074 KCNH7Q9NS40 1196 aa7.56□□□□□ -1.2
SLIRP-203ENST00000554074 BARHL2Q9NY43 387 aa7.56□□□□□ -1.2
SLIRP-203ENST00000554074 TELO2Q9Y4R8 837 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms