RNA–Protein interactions for RNA: ENST00000544327.1

SCARB1-208, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 1,812 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-208ENST00000544327 VSNL1P62760 191 aa19.58■□□□□ 0.72
SCARB1-208ENST00000544327 GIT2Q14161 759 aa19.58■□□□□ 0.72
SCARB1-208ENST00000544327 RRP1BQ14684 758 aaKnown RBP19.58■□□□□ 0.72
SCARB1-208ENST00000544327 HGSNATQ68CP4 663 aa19.58■□□□□ 0.72
SCARB1-208ENST00000544327 EPM2AIP1Q7L775 607 aaPredicted RBP19.58■□□□□ 0.72
SCARB1-208ENST00000544327 KRT26Q7Z3Y9 468 aa19.58■□□□□ 0.72
SCARB1-208ENST00000544327 MMS19Q96T76 1030 aa19.58■□□□□ 0.72
SCARB1-208ENST00000544327 RHOXF2Q9BQY4 288 aa19.58■□□□□ 0.72
SCARB1-208ENST00000544327 ABCB6Q9NP58 842 aa19.58■□□□□ 0.72
SCARB1-208ENST00000544327 DNM3Q9UQ16 869 aa19.58■□□□□ 0.72
SCARB1-208ENST00000544327 TRAF3IP3Q9Y228 551 aa19.58■□□□□ 0.72
SCARB1-208ENST00000544327 DUSP10Q9Y6W6 482 aa19.58■□□□□ 0.72
SCARB1-208ENST00000544327 EP400Q96L91 3159 aa19.57■□□□□ 0.72
SCARB1-208ENST00000544327 MSH4O15457 936 aa19.57■□□□□ 0.72
SCARB1-208ENST00000544327 AKR1B10O60218 316 aa19.57■□□□□ 0.72
SCARB1-208ENST00000544327 ZNF771Q7L3S4 317 aaPredicted RBP19.57■□□□□ 0.72
SCARB1-208ENST00000544327 CACNA2D4Q7Z3S7 1137 aa19.57■□□□□ 0.72
SCARB1-208ENST00000544327 PRMT6Q96LA8 375 aaPredicted RBP19.57■□□□□ 0.72
SCARB1-208ENST00000544327 TANGO6Q9C0B7 1094 aa19.57■□□□□ 0.72
SCARB1-208ENST00000544327 DEF6Q9H4E7 631 aa19.57■□□□□ 0.72
SCARB1-208ENST00000544327 TBC1D7Q9P0N9 293 aa19.57■□□□□ 0.72
SCARB1-208ENST00000544327 PRR12Q9ULL5 1215 aa19.57■□□□□ 0.72
SCARB1-208ENST00000544327 A0A1W2PRG0 241 aa19.56■□□□□ 0.72
SCARB1-208ENST00000544327 KRT18P05783 430 aaKnown RBP19.56■□□□□ 0.72
SCARB1-208ENST00000544327 OAS2P29728 719 aaKnown RBP19.56■□□□□ 0.72
SCARB1-208ENST00000544327 SNAP25P60880 206 aa19.56■□□□□ 0.72
SCARB1-208ENST00000544327 ITIH3Q06033 890 aa19.56■□□□□ 0.72
SCARB1-208ENST00000544327 BMT2Q1RMZ1 405 aa19.56■□□□□ 0.72
SCARB1-208ENST00000544327 NELFCDQ8IXH7 590 aa19.56■□□□□ 0.72
SCARB1-208ENST00000544327 SMCR8Q8TEV9 937 aaPredicted RBP19.56■□□□□ 0.72
SCARB1-208ENST00000544327 SNX12Q9UMY4 172 aa19.56■□□□□ 0.72
SCARB1-208ENST00000544327 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.56■□□□□ 0.72
SCARB1-208ENST00000544327 MACROD2A1Z1Q3 448 aa19.55■□□□□ 0.72
SCARB1-208ENST00000544327 YDJCA8MPS7 323 aa19.55■□□□□ 0.72
SCARB1-208ENST00000544327 CETN3O15182 167 aa19.55■□□□□ 0.72
SCARB1-208ENST00000544327 SERPING1P05155 500 aa19.55■□□□□ 0.72
SCARB1-208ENST00000544327 IKQ13123 557 aaPredicted RBP19.55■□□□□ 0.72
SCARB1-208ENST00000544327 USH1GQ495M9 461 aa19.55■□□□□ 0.72
SCARB1-208ENST00000544327 IQCEQ6IPM2 695 aa19.55■□□□□ 0.72
SCARB1-208ENST00000544327 CSRNP1Q96S65 589 aa19.55■□□□□ 0.72
SCARB1-208ENST00000544327 ARHGEF10LQ9HCE6 1279 aa19.55■□□□□ 0.72
SCARB1-208ENST00000544327 KIF13BQ9NQT8 1826 aa19.55■□□□□ 0.72
SCARB1-208ENST00000544327 CHRNA5P30532 468 aa19.55■□□□□ 0.72
SCARB1-208ENST00000544327 MAGEA1P43355 309 aa19.55■□□□□ 0.72
SCARB1-208ENST00000544327 PSMC6P62333 389 aa19.55■□□□□ 0.72
SCARB1-208ENST00000544327 CACNB1Q02641 598 aaPredicted RBP19.55■□□□□ 0.72
SCARB1-208ENST00000544327 GRIPAP1Q4V328 841 aa19.55■□□□□ 0.72
SCARB1-208ENST00000544327 FAM83BQ5T0W9 1011 aa19.55■□□□□ 0.72
SCARB1-208ENST00000544327 SFMBT2Q5VUG0 894 aa19.55■□□□□ 0.72
SCARB1-208ENST00000544327 FRMD5Q7Z6J6 570 aa19.55■□□□□ 0.72
SCARB1-208ENST00000544327 RNF10Q8N5U6 811 aaKnown RBP19.55■□□□□ 0.72
SCARB1-208ENST00000544327 CCDC155Q8N6L0 562 aa19.55■□□□□ 0.72
SCARB1-208ENST00000544327 LSM14BQ9BX40 385 aaKnown RBP19.55■□□□□ 0.72
SCARB1-208ENST00000544327 SRGAP2O75044 1071 aa19.54■□□□□ 0.72
SCARB1-208ENST00000544327 EYA4O95677 639 aa19.54■□□□□ 0.72
SCARB1-208ENST00000544327 ADAM9Q13443 819 aa19.54■□□□□ 0.72
SCARB1-208ENST00000544327 SLC9C1Q4G0N8 1177 aa19.54■□□□□ 0.72
SCARB1-208ENST00000544327 ALS2CR12Q96Q35 445 aa19.54■□□□□ 0.72
SCARB1-208ENST00000544327 UIMC1Q96RL1 719 aa19.54■□□□□ 0.72
SCARB1-208ENST00000544327 REEP2Q9BRK0 252 aa19.54■□□□□ 0.72
SCARB1-208ENST00000544327 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.54■□□□□ 0.722e-7■■■■■ 62.9
SCARB1-208ENST00000544327 TMX2Q9Y320 296 aa19.54■□□□□ 0.72
SCARB1-208ENST00000544327 CAPN6Q9Y6Q1 641 aa19.54■□□□□ 0.72
SCARB1-208ENST00000544327 IGLV3-22A0A075B6J6 115 aa19.53■□□□□ 0.72
SCARB1-208ENST00000544327 PDXKO00764 312 aa19.53■□□□□ 0.72
SCARB1-208ENST00000544327 STAT2P52630 851 aa19.53■□□□□ 0.72
SCARB1-208ENST00000544327 GPS2Q13227 327 aa19.53■□□□□ 0.72
SCARB1-208ENST00000544327 PABPC4Q13310 644 aaKnown RBP eCLIP19.53■□□□□ 0.72
SCARB1-208ENST00000544327 KNOP1Q1ED39 458 aaKnown RBP19.53■□□□□ 0.72
SCARB1-208ENST00000544327 ZNF772Q68DY9 489 aaPredicted RBP19.53■□□□□ 0.72
SCARB1-208ENST00000544327 GANQ9H2C0 597 aa19.53■□□□□ 0.72
SCARB1-208ENST00000544327 AIPL1Q9NZN9 384 aa19.53■□□□□ 0.72
SCARB1-208ENST00000544327 TMOD2Q9NZR1 351 aa19.53■□□□□ 0.72
SCARB1-208ENST00000544327 TLR2O60603 784 aa19.53■□□□□ 0.72
SCARB1-208ENST00000544327 PLA2G6O60733 806 aa19.53■□□□□ 0.72
SCARB1-208ENST00000544327 EIF3JO75822 258 aaKnown RBP19.53■□□□□ 0.72
SCARB1-208ENST00000544327 SFR1Q86XK3 245 aa19.53■□□□□ 0.72
SCARB1-208ENST00000544327 RUBCNQ92622 972 aa19.53■□□□□ 0.72
SCARB1-208ENST00000544327 MLXIPQ9HAP2 919 aa19.53■□□□□ 0.72
SCARB1-208ENST00000544327 TUFT1Q9NNX1 390 aa19.53■□□□□ 0.72
SCARB1-208ENST00000544327 PLCB1Q9NQ66 1216 aa19.53■□□□□ 0.72
SCARB1-208ENST00000544327 ZNF219Q9P2Y4 722 aaPredicted RBP19.53■□□□□ 0.72
SCARB1-208ENST00000544327 SPDYE2BA6NHP3 402 aa19.52■□□□□ 0.72
SCARB1-208ENST00000544327 PDE2AO00408 941 aaPredicted RBP19.52■□□□□ 0.72
SCARB1-208ENST00000544327 PPIP5K2O43314 1243 aa19.52■□□□□ 0.72
SCARB1-208ENST00000544327 CALUO43852 315 aaPredicted RBP19.52■□□□□ 0.72
SCARB1-208ENST00000544327 SPDYE6P0CI01 402 aa19.52■□□□□ 0.72
SCARB1-208ENST00000544327 NR2F2P24468 414 aa19.52■□□□□ 0.72
SCARB1-208ENST00000544327 CYP2C19P33261 490 aa19.52■□□□□ 0.72
SCARB1-208ENST00000544327 HOXD13P35453 343 aa19.52■□□□□ 0.72
SCARB1-208ENST00000544327 CASP5P51878 434 aa19.52■□□□□ 0.72
SCARB1-208ENST00000544327 CREG2Q8IUH2 290 aa19.52■□□□□ 0.72
SCARB1-208ENST00000544327 MMGT1Q8N4V1 131 aa19.52■□□□□ 0.72
SCARB1-208ENST00000544327 FAM151AQ8WW52 585 aa19.52■□□□□ 0.72
SCARB1-208ENST00000544327 EIF2AK1Q9BQI3 630 aaKnown RBP19.52■□□□□ 0.72
SCARB1-208ENST00000544327 GOPCQ9HD26 462 aa19.52■□□□□ 0.72
SCARB1-208ENST00000544327 RBBP6Q7Z6E9 1792 aaKnown RBP19.52■□□□□ 0.71
SCARB1-208ENST00000544327 MEIS1O00470 390 aa19.51■□□□□ 0.71
SCARB1-208ENST00000544327 SLC16A3O15427 465 aaKnown RBP19.51■□□□□ 0.71
SCARB1-208ENST00000544327 MOCS3O95396 460 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms