RNA–Protein interactions for RNA: ENST00000524126.5

SPIDR-224, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 1 (best)

Gene SPIDR, Length 2,614 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-224ENST00000524126 GCKRQ14397 625 aa11.13□□□□□ -0.63
SPIDR-224ENST00000524126 ZNF658Q5TYW1 1059 aaPredicted RBP11.13□□□□□ -0.63
SPIDR-224ENST00000524126 RETREG2Q8NC44 543 aa11.13□□□□□ -0.63
SPIDR-224ENST00000524126 LRRC45Q96CN5 670 aa11.13□□□□□ -0.63
SPIDR-224ENST00000524126 FGD4Q96M96 766 aa11.13□□□□□ -0.63
SPIDR-224ENST00000524126 TUBGCP2Q9BSJ2 902 aa11.13□□□□□ -0.63
SPIDR-224ENST00000524126 PREBQ9HCU5 417 aa11.13□□□□□ -0.63
SPIDR-224ENST00000524126 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.13□□□□□ -0.63
SPIDR-224ENST00000524126 MYH2Q9UKX2 1941 aa11.13□□□□□ -0.63
SPIDR-224ENST00000524126 NRAPQ86VF7 1730 aa11.13□□□□□ -0.63
SPIDR-224ENST00000524126 GOLGB1Q14789 3259 aaKnown RBP11.13□□□□□ -0.63
SPIDR-224ENST00000524126 LRP6O75581 1613 aa11.13□□□□□ -0.63
SPIDR-224ENST00000524126 CREB3O43889 395 aa11.13□□□□□ -0.63
SPIDR-224ENST00000524126 HIP1RO75146 1068 aa11.13□□□□□ -0.63
SPIDR-224ENST00000524126 EHHADHQ08426 723 aa11.13□□□□□ -0.63
SPIDR-224ENST00000524126 PLS1Q14651 629 aa11.13□□□□□ -0.63
SPIDR-224ENST00000524126 LBRQ14739 615 aaKnown RBP11.13□□□□□ -0.63
SPIDR-224ENST00000524126 SEPT2Q15019 361 aa11.13□□□□□ -0.63
SPIDR-224ENST00000524126 ZNF174Q15697 407 aa11.13□□□□□ -0.63
SPIDR-224ENST00000524126 TLCD1Q96CP7 247 aa11.13□□□□□ -0.63
SPIDR-224ENST00000524126 YIPF2Q9BWQ6 316 aa11.13□□□□□ -0.63
SPIDR-224ENST00000524126 ADAM7Q9H2U9 754 aa11.13□□□□□ -0.63
SPIDR-224ENST00000524126 THAP9Q9H5L6 903 aa11.13□□□□□ -0.63
SPIDR-224ENST00000524126 ARHGEF3Q9NR81 526 aa11.13□□□□□ -0.63
SPIDR-224ENST00000524126 LRRC42Q9Y546 428 aa11.13□□□□□ -0.63
SPIDR-224ENST00000524126 F8VZ95 297 aa11.12□□□□□ -0.63
SPIDR-224ENST00000524126 H0Y3Z8 333 aa11.12□□□□□ -0.63
SPIDR-224ENST00000524126 RPN1P04843 607 aaKnown RBP11.12□□□□□ -0.63
SPIDR-224ENST00000524126 ATP6V1C1P21283 382 aa11.12□□□□□ -0.63
SPIDR-224ENST00000524126 ITGA6P23229 1130 aa11.12□□□□□ -0.63
SPIDR-224ENST00000524126 HSPA1LP34931 641 aa11.12□□□□□ -0.63
SPIDR-224ENST00000524126 GALNTL6Q49A17 601 aa11.12□□□□□ -0.63
SPIDR-224ENST00000524126 ACBD5Q5T8D3 534 aaPredicted RBP11.12□□□□□ -0.63
SPIDR-224ENST00000524126 OR52E8Q6IFG1 317 aa11.12□□□□□ -0.63
SPIDR-224ENST00000524126 CACNA2D4Q7Z3S7 1137 aa11.12□□□□□ -0.63
SPIDR-224ENST00000524126 TRIM42Q8IWZ5 723 aa11.12□□□□□ -0.63
SPIDR-224ENST00000524126 BICD1Q96G01 975 aa11.12□□□□□ -0.63
SPIDR-224ENST00000524126 INPP4AQ96PE3 977 aaPredicted RBP11.12□□□□□ -0.63
SPIDR-224ENST00000524126 NOX5Q96PH1 765 aa11.12□□□□□ -0.63
SPIDR-224ENST00000524126 RAB17Q9H0T7 212 aa11.12□□□□□ -0.63
SPIDR-224ENST00000524126 FOXP1Q9H334 677 aaPredicted RBP11.12□□□□□ -0.63
SPIDR-224ENST00000524126 MAGEC2Q9UBF1 373 aaPredicted RBP11.12□□□□□ -0.63
SPIDR-224ENST00000524126 TLDC2A0PJX2 215 aa11.12□□□□□ -0.63
SPIDR-224ENST00000524126 TRIM75PA6NK02 468 aa11.12□□□□□ -0.63
SPIDR-224ENST00000524126 DAPK3O43293 454 aa11.12□□□□□ -0.63
SPIDR-224ENST00000524126 SGSM1Q2NKQ1 1148 aa11.12□□□□□ -0.63
SPIDR-224ENST00000524126 CCDC38Q502W7 563 aa11.12□□□□□ -0.63
SPIDR-224ENST00000524126 ANKRD13DQ6ZTN6 518 aa11.12□□□□□ -0.63
SPIDR-224ENST00000524126 MIGA2Q7L4E1 593 aa11.12□□□□□ -0.63
SPIDR-224ENST00000524126 UTP4Q969X6 686 aaKnown RBP11.12□□□□□ -0.63
SPIDR-224ENST00000524126 SHISA4Q96DD7 197 aa11.12□□□□□ -0.63
SPIDR-224ENST00000524126 AP1M1Q9BXS5 423 aa11.12□□□□□ -0.63
SPIDR-224ENST00000524126 CNOT10Q9H9A5 744 aaKnown RBP11.12□□□□□ -0.63
SPIDR-224ENST00000524126 LY9Q9HBG7 655 aa11.12□□□□□ -0.63
SPIDR-224ENST00000524126 FAM207AQ9NSI2 230 aaPredicted RBP11.12□□□□□ -0.63
SPIDR-224ENST00000524126 UBR2Q8IWV8 1755 aa11.12□□□□□ -0.63
SPIDR-224ENST00000524126 MYH6P13533 1939 aa11.12□□□□□ -0.63
SPIDR-224ENST00000524126 OATP04181 439 aa11.11□□□□□ -0.63
SPIDR-224ENST00000524126 EEF1GP26641 437 aaKnown RBP11.11□□□□□ -0.63
SPIDR-224ENST00000524126 TNNC1P63316 161 aa11.11□□□□□ -0.63
SPIDR-224ENST00000524126 KLC1Q07866 573 aa11.11□□□□□ -0.63
SPIDR-224ENST00000524126 DHX9Q08211 1270 aaKnown RBP11.11□□□□□ -0.63
SPIDR-224ENST00000524126 BNIP1Q12981 228 aa11.11□□□□□ -0.63
SPIDR-224ENST00000524126 DDB1Q16531 1140 aa11.11□□□□□ -0.63
SPIDR-224ENST00000524126 TMEM67Q5HYA8 995 aa11.11□□□□□ -0.63
SPIDR-224ENST00000524126 PDXDC2PQ6P474 469 aa11.11□□□□□ -0.63
SPIDR-224ENST00000524126 TMC3Q7Z5M5 1100 aa11.11□□□□□ -0.63
SPIDR-224ENST00000524126 USP38Q8NB14 1042 aa11.11□□□□□ -0.63
SPIDR-224ENST00000524126 FBF1Q8TES7 1133 aa11.11□□□□□ -0.63
SPIDR-224ENST00000524126 PHACTR1Q9C0D0 580 aa11.11□□□□□ -0.63
SPIDR-224ENST00000524126 DPH5Q9H2P9 285 aa11.11□□□□□ -0.63
SPIDR-224ENST00000524126 PHF24Q9UPV7 400 aa11.11□□□□□ -0.63
SPIDR-224ENST00000524126 hCG_1642624A0A1W2PR95 340 aa11.11□□□□□ -0.63
SPIDR-224ENST00000524126 GTPBP6O43824 516 aaPredicted RBP11.11□□□□□ -0.63
SPIDR-224ENST00000524126 SNX3O60493 162 aa11.11□□□□□ -0.63
SPIDR-224ENST00000524126 GM2AP17900 193 aa11.11□□□□□ -0.63
SPIDR-224ENST00000524126 PEX5P50542 639 aa11.11□□□□□ -0.63
SPIDR-224ENST00000524126 IFI35P80217 286 aaPredicted RBP11.11□□□□□ -0.63
SPIDR-224ENST00000524126 CCDC178Q5BJE1 867 aa11.11□□□□□ -0.63
SPIDR-224ENST00000524126 ADSSL1Q8N142 457 aa11.11□□□□□ -0.63
SPIDR-224ENST00000524126 SUPT20HQ8NEM7 779 aa11.11□□□□□ -0.63
SPIDR-224ENST00000524126 IGDCC4Q8TDY8 1250 aa11.11□□□□□ -0.63
SPIDR-224ENST00000524126 CENPTQ96BT3 561 aa11.11□□□□□ -0.63
SPIDR-224ENST00000524126 IFT43Q96FT9 208 aa11.11□□□□□ -0.63
SPIDR-224ENST00000524126 PBKQ96KB5 322 aa11.11□□□□□ -0.63
SPIDR-224ENST00000524126 NDNQ99608 321 aa11.11□□□□□ -0.63
SPIDR-224ENST00000524126 PPP1R12CQ9BZL4 782 aa11.11□□□□□ -0.63
SPIDR-224ENST00000524126 DDX47Q9H0S4 455 aaKnown RBP11.11□□□□□ -0.63
SPIDR-224ENST00000524126 TSPYL2Q9H2G4 693 aaPredicted RBP11.11□□□□□ -0.63
SPIDR-224ENST00000524126 GOLPH3Q9H4A6 298 aa11.11□□□□□ -0.63
SPIDR-224ENST00000524126 ZWILCHQ9H900 591 aa11.11□□□□□ -0.63
SPIDR-224ENST00000524126 GALNT8Q9NY28 637 aa11.11□□□□□ -0.63
SPIDR-224ENST00000524126 ATP8A1Q9Y2Q0 1164 aa11.11□□□□□ -0.63
SPIDR-224ENST00000524126 DOT1LQ8TEK3 1739 aa11.11□□□□□ -0.63
SPIDR-224ENST00000524126 SPATA31A5Q5VU36 1347 aa11.11□□□□□ -0.63
SPIDR-224ENST00000524126 SPATA31A7Q8IWB4 1347 aa11.11□□□□□ -0.63
SPIDR-224ENST00000524126 GOLGA6L10A0A0M3HER8 536 aa11.1□□□□□ -0.63
SPIDR-224ENST00000524126 GPAA1O43292 621 aa11.1□□□□□ -0.63
SPIDR-224ENST00000524126 PEX11AO75192 247 aa11.1□□□□□ -0.63
SPIDR-224ENST00000524126 DDX58O95786 925 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms