RNA–Protein interactions for RNA: ENST00000514537.5

CLDND1-230, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 1,013 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-230ENST00000514537 PPFIA3O75145 1194 aa26.3■■□□□ 1.8
CLDND1-230ENST00000514537 ARP10275 920 aa26.3■■□□□ 1.8
CLDND1-230ENST00000514537 ATP2A2P16615 1042 aaKnown RBP26.3■■□□□ 1.8
CLDND1-230ENST00000514537 ARHGAP4P98171 946 aa26.3■■□□□ 1.8
CLDND1-230ENST00000514537 GRIN2CQ14957 1233 aa26.3■■□□□ 1.8
CLDND1-230ENST00000514537 MCTP2Q6DN12 878 aa26.3■■□□□ 1.8
CLDND1-230ENST00000514537 CRYGNQ8WXF5 182 aa26.3■■□□□ 1.8
CLDND1-230ENST00000514537 JPH1Q9HDC5 661 aaPredicted RBP26.3■■□□□ 1.8
CLDND1-230ENST00000514537 PDRG1Q9NUG6 133 aa26.3■■□□□ 1.8
CLDND1-230ENST00000514537 SETD4Q9NVD3 440 aa26.3■■□□□ 1.8
CLDND1-230ENST00000514537 TRIP12Q14669 1992 aaPredicted RBP26.29■■□□□ 1.8
CLDND1-230ENST00000514537 SCN5AQ14524 2016 aa26.29■■□□□ 1.8
CLDND1-230ENST00000514537 GNAT1P11488 350 aa26.29■■□□□ 1.8
CLDND1-230ENST00000514537 GNA11P29992 359 aa26.29■■□□□ 1.8
CLDND1-230ENST00000514537 ADAM17P78536 824 aa26.29■■□□□ 1.8
CLDND1-230ENST00000514537 MYLIPQ8WY64 445 aa26.29■■□□□ 1.8
CLDND1-230ENST00000514537 LARP6Q9BRS8 491 aaKnown RBP26.29■■□□□ 1.8
CLDND1-230ENST00000514537 AGO4Q9HCK5 861 aaKnown RBP26.29■■□□□ 1.8
CLDND1-230ENST00000514537 YBX2Q9Y2T7 364 aaKnown RBP26.29■■□□□ 1.8
CLDND1-230ENST00000514537 NFASCO94856 1347 aa26.29■■□□□ 1.8
CLDND1-230ENST00000514537 BAIAP3O94812 1187 aa26.28■■□□□ 1.8
CLDND1-230ENST00000514537 CYP3A4P08684 503 aa26.28■■□□□ 1.8
CLDND1-230ENST00000514537 THPOP40225 353 aa26.28■■□□□ 1.8
CLDND1-230ENST00000514537 RABGGTBP53611 331 aa26.28■■□□□ 1.8
CLDND1-230ENST00000514537 NIPA1Q7RTP0 329 aa26.28■■□□□ 1.8
CLDND1-230ENST00000514537 REXO1Q8N1G1 1221 aaKnown RBP26.28■■□□□ 1.8
CLDND1-230ENST00000514537 PHOSPHO2Q8TCD6 241 aa26.28■■□□□ 1.8
CLDND1-230ENST00000514537 SLC9A2Q9UBY0 812 aa26.28■■□□□ 1.8
CLDND1-230ENST00000514537 PCDHA11Q9Y5I1 949 aa26.28■■□□□ 1.8
CLDND1-230ENST00000514537 CHD9Q3L8U1 2897 aa26.28■■□□□ 1.8
CLDND1-230ENST00000514537 TET1Q8NFU7 2136 aa26.27■■□□□ 1.8
CLDND1-230ENST00000514537 ZNF76P36508 570 aa26.27■■□□□ 1.8
CLDND1-230ENST00000514537 MBTPS1Q14703 1052 aa26.27■■□□□ 1.8
CLDND1-230ENST00000514537 CCDC148Q8NFR7 591 aa26.27■■□□□ 1.8
CLDND1-230ENST00000514537 SLC9A7Q96T83 725 aa26.27■■□□□ 1.8
CLDND1-230ENST00000514537 SDF4Q9BRK5 362 aa26.27■■□□□ 1.8
CLDND1-230ENST00000514537 NKX2-4Q9H2Z4 354 aa26.27■■□□□ 1.8
CLDND1-230ENST00000514537 SMARCAD1Q9H4L7 1026 aa26.27■■□□□ 1.8
CLDND1-230ENST00000514537 ERAP1Q9NZ08 941 aa26.27■■□□□ 1.8
CLDND1-230ENST00000514537 NRCAMQ92823 1304 aa26.27■■□□□ 1.8
CLDND1-230ENST00000514537 DOCK5Q9H7D0 1870 aa26.27■■□□□ 1.8
CLDND1-230ENST00000514537 TANC1Q9C0D5 1861 aa26.26■■□□□ 1.79
CLDND1-230ENST00000514537 RSPH10B2B2RC85 870 aa26.26■■□□□ 1.79
CLDND1-230ENST00000514537 FAM86B1E9PN63 330 aa26.26■■□□□ 1.79
CLDND1-230ENST00000514537 LGR5O75473 907 aa26.26■■□□□ 1.79
CLDND1-230ENST00000514537 FAM86B2P0C5J1 330 aa26.26■■□□□ 1.79
CLDND1-230ENST00000514537 RSPH10BP0C881 870 aa26.26■■□□□ 1.79
CLDND1-230ENST00000514537 ANAPC15P60006 121 aa26.26■■□□□ 1.79
CLDND1-230ENST00000514537 ITGB3BPQ13352 177 aaPredicted RBP26.26■■□□□ 1.79
CLDND1-230ENST00000514537 CNKSR3Q6P9H4 555 aa26.26■■□□□ 1.79
CLDND1-230ENST00000514537 SLC17A8Q8NDX2 589 aa26.26■■□□□ 1.79
CLDND1-230ENST00000514537 BICD2Q8TD16 824 aa26.26■■□□□ 1.79
CLDND1-230ENST00000514537 LMBR1Q8WVP7 490 aa26.26■■□□□ 1.79
CLDND1-230ENST00000514537 GLG1Q92896 1179 aa26.26■■□□□ 1.79
CLDND1-230ENST00000514537 PCYT2Q99447 389 aa26.26■■□□□ 1.79
CLDND1-230ENST00000514537 SH3GLB2Q9NR46 395 aa26.26■■□□□ 1.79
CLDND1-230ENST00000514537 VPS54Q9P1Q0 977 aa26.26■■□□□ 1.79
CLDND1-230ENST00000514537 A0A0C4DFX4 3053 aa26.26■■□□□ 1.79
CLDND1-230ENST00000514537 CAND2O75155 1236 aa26.25■■□□□ 1.79
CLDND1-230ENST00000514537 SSRP1Q08945 709 aaKnown RBP26.25■■□□□ 1.79
CLDND1-230ENST00000514537 TRIM22Q8IYM9 498 aa26.25■■□□□ 1.79
CLDND1-230ENST00000514537 SLC28A3Q9HAS3 691 aa26.25■■□□□ 1.79
CLDND1-230ENST00000514537 EMSYQ7Z589 1322 aa26.24■■□□□ 1.79
CLDND1-230ENST00000514537 IGLV3-22A0A075B6J6 115 aa26.24■■□□□ 1.79
CLDND1-230ENST00000514537 CPLX1O14810 134 aa26.24■■□□□ 1.79
CLDND1-230ENST00000514537 MYOGP15173 224 aa26.24■■□□□ 1.79
CLDND1-230ENST00000514537 ACTR2P61160 394 aa26.24■■□□□ 1.79
CLDND1-230ENST00000514537 TCTN1Q2MV58 587 aa26.24■■□□□ 1.79
CLDND1-230ENST00000514537 PLA2G4DQ86XP0 818 aa26.24■■□□□ 1.79
CLDND1-230ENST00000514537 ATG7O95352 703 aa26.23■■□□□ 1.79
CLDND1-230ENST00000514537 FOSL2P15408 326 aa26.23■■□□□ 1.79
CLDND1-230ENST00000514537 MARK3P27448 753 aa26.23■■□□□ 1.79
CLDND1-230ENST00000514537 PPFIA1Q13136 1202 aa26.23■■□□□ 1.79
CLDND1-230ENST00000514537 STK3Q13188 491 aa26.23■■□□□ 1.79
CLDND1-230ENST00000514537 RASGRP4Q8TDF6 673 aa26.23■■□□□ 1.79
CLDND1-230ENST00000514537 IL17RAQ96F46 866 aa26.23■■□□□ 1.79
CLDND1-230ENST00000514537 EYSQ5T1H1 3165 aa26.22■■□□□ 1.79
CLDND1-230ENST00000514537 ABHD14A-ACY1A0A1B0GW23 586 aa26.22■■□□□ 1.79
CLDND1-230ENST00000514537 DEXIO95424 95 aa26.22■■□□□ 1.79
CLDND1-230ENST00000514537 KCNJ6P48051 423 aa26.22■■□□□ 1.79
CLDND1-230ENST00000514537 WDR5P61964 334 aaKnown RBP26.22■■□□□ 1.79
CLDND1-230ENST00000514537 CPLX2Q6PUV4 134 aaKnown RBP26.22■■□□□ 1.79
CLDND1-230ENST00000514537 HERC6Q8IVU3 1022 aa26.22■■□□□ 1.79
CLDND1-230ENST00000514537 AZI2Q9H6S1 392 aa26.22■■□□□ 1.79
CLDND1-230ENST00000514537 CHD7Q9P2D1 2997 aa26.21■■□□□ 1.79
CLDND1-230ENST00000514537 DHX15O43143 795 aaKnown RBP26.21■■□□□ 1.79
CLDND1-230ENST00000514537 CIITAP33076 1130 aa26.21■■□□□ 1.79
CLDND1-230ENST00000514537 NLRP5P59047 1200 aa26.21■■□□□ 1.79
CLDND1-230ENST00000514537 IKBKEQ14164 716 aa26.21■■□□□ 1.79
CLDND1-230ENST00000514537 GRIK4Q16099 956 aa26.21■■□□□ 1.79
CLDND1-230ENST00000514537 PLPPR4Q7Z2D5 763 aa26.21■■□□□ 1.79
CLDND1-230ENST00000514537 RPAINQ86UA6 219 aa26.21■■□□□ 1.79
CLDND1-230ENST00000514537 MAFAQ8NHW3 353 aaPredicted RBP26.21■■□□□ 1.79
CLDND1-230ENST00000514537 MBLAC1A4D2B0 266 aaPredicted RBP26.2■■□□□ 1.78
CLDND1-230ENST00000514537 RBAK-RBAKDNI3L0D1 243 aa26.2■■□□□ 1.78
CLDND1-230ENST00000514537 EIF5BO60841 1220 aaKnown RBP26.2■■□□□ 1.78
CLDND1-230ENST00000514537 EFCAB14O75071 495 aa26.2■■□□□ 1.78
CLDND1-230ENST00000514537 CCNE2O96020 404 aa26.2■■□□□ 1.78
CLDND1-230ENST00000514537 STAT5BP51692 787 aa26.2■■□□□ 1.78
CLDND1-230ENST00000514537 SETQ01105 290 aaPredicted RBP26.2■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms