RNA–Protein interactions for RNA: ENST00000483508.5

SORT1-205, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 759 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-205ENST00000483508 ESYT2A0FGR8 921 aa9.06□□□□□ -0.96
SORT1-205ENST00000483508 CCDC151A5D8V7 595 aa9.06□□□□□ -0.96
SORT1-205ENST00000483508 LGALS16A8MUM7 142 aa9.06□□□□□ -0.96
SORT1-205ENST00000483508 GH2P01242 217 aa9.06□□□□□ -0.96
SORT1-205ENST00000483508 PARP1P09874 1014 aaKnown RBP9.06□□□□□ -0.96
SORT1-205ENST00000483508 OR52Z1P0C646 297 aa9.06□□□□□ -0.96
SORT1-205ENST00000483508 XRCC5P13010 732 aaKnown RBP9.06□□□□□ -0.96
SORT1-205ENST00000483508 PRKAR2AP13861 404 aaKnown RBP9.06□□□□□ -0.96
SORT1-205ENST00000483508 SYN1P17600 705 aa9.06□□□□□ -0.96
SORT1-205ENST00000483508 CASP1P29466 404 aa9.06□□□□□ -0.96
SORT1-205ENST00000483508 CCT6AP40227 531 aaKnown RBP9.06□□□□□ -0.96
SORT1-205ENST00000483508 PRCPP42785 496 aa9.06□□□□□ -0.96
SORT1-205ENST00000483508 DNM2P50570 870 aa9.06□□□□□ -0.96
SORT1-205ENST00000483508 USP14P54578 494 aa9.06□□□□□ -0.96
SORT1-205ENST00000483508 CHMP4BP1P59074 171 aa9.06□□□□□ -0.96
SORT1-205ENST00000483508 AMPD3Q01432 767 aa9.06□□□□□ -0.96
SORT1-205ENST00000483508 MTF1Q14872 753 aa9.06□□□□□ -0.96
SORT1-205ENST00000483508 NONOQ15233 471 aaKnown RBP eCLIP9.06□□□□□ -0.96
SORT1-205ENST00000483508 PTPN21Q16825 1174 aa9.06□□□□□ -0.96
SORT1-205ENST00000483508 TSR1Q2NL82 804 aaKnown RBP9.06□□□□□ -0.96
SORT1-205ENST00000483508 TEX35Q5T0J7 233 aa9.06□□□□□ -0.96
SORT1-205ENST00000483508 MFSD14CQ5VZR4 134 aa9.06□□□□□ -0.96
SORT1-205ENST00000483508 CC2D1AQ6P1N0 951 aaPredicted RBP9.06□□□□□ -0.96
SORT1-205ENST00000483508 C16orf86Q6ZW13 317 aa9.06□□□□□ -0.96
SORT1-205ENST00000483508 GPR142Q7Z601 462 aa9.06□□□□□ -0.96
SORT1-205ENST00000483508 PLEKHH3Q7Z736 793 aa9.06□□□□□ -0.96
SORT1-205ENST00000483508 SMYD4Q8IYR2 804 aaPredicted RBP9.06□□□□□ -0.96
SORT1-205ENST00000483508 MSL3Q8N5Y2 521 aaKnown RBP9.06□□□□□ -0.96
SORT1-205ENST00000483508 RETREG2Q8NC44 543 aa9.06□□□□□ -0.96
SORT1-205ENST00000483508 SLC17A8Q8NDX2 589 aa9.06□□□□□ -0.96
SORT1-205ENST00000483508 RASSF8Q8NHQ8 419 aa9.06□□□□□ -0.96
SORT1-205ENST00000483508 NEDD1Q8NHV4 660 aa9.06□□□□□ -0.96
SORT1-205ENST00000483508 CPLX3Q8WVH0 158 aa9.06□□□□□ -0.96
SORT1-205ENST00000483508 HNRNPLLQ8WVV9 542 aaKnown RBP9.06□□□□□ -0.96
SORT1-205ENST00000483508 TRIB2Q92519 343 aa9.06□□□□□ -0.96
SORT1-205ENST00000483508 GPKOWQ92917 476 aaPredicted RBP eCLIP9.06□□□□□ -0.96
SORT1-205ENST00000483508 NUP88Q99567 741 aaPredicted RBP9.06□□□□□ -0.96
SORT1-205ENST00000483508 MTRQ99707 1265 aa9.06□□□□□ -0.96
SORT1-205ENST00000483508 NAPGQ99747 312 aaPredicted RBP9.06□□□□□ -0.96
SORT1-205ENST00000483508 ZMYND12Q9H0C1 365 aa9.06□□□□□ -0.96
SORT1-205ENST00000483508 GBP3Q9H0R5 595 aa9.06□□□□□ -0.96
SORT1-205ENST00000483508 C6orf50Q9HD87 102 aa9.06□□□□□ -0.96
SORT1-205ENST00000483508 ARFGAP3Q9NP61 516 aa9.06□□□□□ -0.96
SORT1-205ENST00000483508 TAB2Q9NYJ8 693 aa9.06□□□□□ -0.96
SORT1-205ENST00000483508 IVNS1ABPQ9Y6Y0 642 aa9.06□□□□□ -0.96
SORT1-205ENST00000483508 PLIN4Q96Q06 1357 aa9.06□□□□□ -0.96
SORT1-205ENST00000483508 MYH7BA7E2Y1 1941 aa9.05□□□□□ -0.96
SORT1-205ENST00000483508 GREB1LQ9C091 1923 aaPredicted RBP9.05□□□□□ -0.96
SORT1-205ENST00000483508 CCDC66A2RUB6 948 aa9.05□□□□□ -0.96
SORT1-205ENST00000483508 USP17L15C9J2P7 530 aa9.05□□□□□ -0.96
SORT1-205ENST00000483508 USP17L13C9JLJ4 530 aa9.05□□□□□ -0.96
SORT1-205ENST00000483508 USP17L11C9JVI0 530 aa9.05□□□□□ -0.96
SORT1-205ENST00000483508 USP17L18D6R9N7 530 aa9.05□□□□□ -0.96
SORT1-205ENST00000483508 USP17L22D6RA61 530 aa9.05□□□□□ -0.96
SORT1-205ENST00000483508 USP17L17D6RBQ6 530 aa9.05□□□□□ -0.96
SORT1-205ENST00000483508 USP17L19D6RCP7 530 aa9.05□□□□□ -0.96
SORT1-205ENST00000483508 USP17L20D6RJB6 530 aa9.05□□□□□ -0.96
SORT1-205ENST00000483508 MPHOSPH10O00566 681 aaKnown RBP9.05□□□□□ -0.96
SORT1-205ENST00000483508 KLRC4O43908 158 aa9.05□□□□□ -0.96
SORT1-205ENST00000483508 PEX10O60683 326 aa9.05□□□□□ -0.96
SORT1-205ENST00000483508 ERLIN1O75477 346 aa9.05□□□□□ -0.96
SORT1-205ENST00000483508 MYCNP04198 464 aaPredicted RBP9.05□□□□□ -0.96
SORT1-205ENST00000483508 RASA1P20936 1047 aa9.05□□□□□ -0.96
SORT1-205ENST00000483508 CCNE1P24864 410 aa9.05□□□□□ -0.96
SORT1-205ENST00000483508 CNGA1P29973 690 aa9.05□□□□□ -0.96
SORT1-205ENST00000483508 KRT9P35527 623 aa9.05□□□□□ -0.96
SORT1-205ENST00000483508 PLA2G4AP47712 749 aa9.05□□□□□ -0.96
SORT1-205ENST00000483508 NOVP48745 357 aa9.05□□□□□ -0.96
SORT1-205ENST00000483508 UBXN1Q04323 297 aa9.05□□□□□ -0.96
SORT1-205ENST00000483508 USP17L24Q0WX57 530 aa9.05□□□□□ -0.96
SORT1-205ENST00000483508 ABCB5Q2M3G0 1257 aa9.05□□□□□ -0.96
SORT1-205ENST00000483508 Q3C1V9 767 aa9.05□□□□□ -0.96
SORT1-205ENST00000483508 CERKLQ49MI3 558 aaPredicted RBP9.05□□□□□ -0.96
SORT1-205ENST00000483508 NAALADL2Q58DX5 795 aa9.05□□□□□ -0.96
SORT1-205ENST00000483508 ZNF569Q5MCW4 686 aa9.05□□□□□ -0.96
SORT1-205ENST00000483508 SAMD1Q6SPF0 538 aaPredicted RBP9.05□□□□□ -0.96
SORT1-205ENST00000483508 HEATR3Q7Z4Q2 680 aa9.05□□□□□ -0.96
SORT1-205ENST00000483508 CABP7Q86V35 215 aa9.05□□□□□ -0.96
SORT1-205ENST00000483508 STAG2Q8N3U4 1231 aa9.05□□□□□ -0.96
SORT1-205ENST00000483508 MB21D1Q8N884 522 aa9.05□□□□□ -0.96
SORT1-205ENST00000483508 MSANTD4Q8NCY6 345 aa9.05□□□□□ -0.96
SORT1-205ENST00000483508 GIMAP8Q8ND71 665 aaPredicted RBP9.05□□□□□ -0.96
SORT1-205ENST00000483508 EHBP1Q8NDI1 1231 aa9.05□□□□□ -0.96
SORT1-205ENST00000483508 OR8K1Q8NGG5 319 aa9.05□□□□□ -0.96
SORT1-205ENST00000483508 STAMQ92783 540 aa9.05□□□□□ -0.96
SORT1-205ENST00000483508 RRP36Q96EU6 259 aaKnown RBP9.05□□□□□ -0.96
SORT1-205ENST00000483508 DNAJC7Q99615 494 aa9.05□□□□□ -0.96
SORT1-205ENST00000483508 C7orf25Q9BPX7 421 aa9.05□□□□□ -0.96
SORT1-205ENST00000483508 TMEM47Q9BQJ4 181 aa9.05□□□□□ -0.96
SORT1-205ENST00000483508 UBXN6Q9BZV1 441 aa9.05□□□□□ -0.96
SORT1-205ENST00000483508 VPS16Q9H269 839 aa9.05□□□□□ -0.96
SORT1-205ENST00000483508 HAUS4Q9H6D7 363 aa9.05□□□□□ -0.96
SORT1-205ENST00000483508 DNAJC18Q9H819 358 aa9.05□□□□□ -0.96
SORT1-205ENST00000483508 TXNRD2Q9NNW7 524 aa9.05□□□□□ -0.96
SORT1-205ENST00000483508 LZTFL1Q9NQ48 299 aa9.05□□□□□ -0.96
SORT1-205ENST00000483508 RBPJLQ9UBG7 517 aa9.05□□□□□ -0.96
SORT1-205ENST00000483508 SERPINB13Q9UIV8 391 aa9.05□□□□□ -0.96
SORT1-205ENST00000483508 OGDHLQ9ULD0 1010 aa9.05□□□□□ -0.96
SORT1-205ENST00000483508 CAPN11Q9UMQ6 739 aa9.05□□□□□ -0.96
SORT1-205ENST00000483508 GDAQ9Y2T3 454 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms