RNA–Protein interactions for RNA: ENST00000474658.6

APTX-219, Transcript of aprataxin, humanhuman

TSL 5

Gene APTX, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-219ENST00000474658 F2P00734 622 aa10.78□□□□□ -0.68
APTX-219ENST00000474658 LGALS2P05162 132 aa10.78□□□□□ -0.68
APTX-219ENST00000474658 TCF7P36402 384 aaPredicted RBP10.78□□□□□ -0.68
APTX-219ENST00000474658 PSEN2P49810 448 aa10.78□□□□□ -0.68
APTX-219ENST00000474658 FAAP100Q0VG06 881 aa10.78□□□□□ -0.68
APTX-219ENST00000474658 MFSD10Q14728 455 aa10.78□□□□□ -0.68
APTX-219ENST00000474658 KIAA0753Q2KHM9 967 aa10.78□□□□□ -0.68
APTX-219ENST00000474658 Q4G0T1 1027 aa10.78□□□□□ -0.68
APTX-219ENST00000474658 MOXD1Q6UVY6 613 aa10.78□□□□□ -0.68
APTX-219ENST00000474658 SH3RF1Q7Z6J0 888 aa10.78□□□□□ -0.68
APTX-219ENST00000474658 FAM126BQ8IXS8 530 aa10.78□□□□□ -0.68
APTX-219ENST00000474658 SEPT1Q8WYJ6 367 aa10.78□□□□□ -0.68
APTX-219ENST00000474658 SNX21Q969T3 373 aa10.78□□□□□ -0.68
APTX-219ENST00000474658 TOX2Q96NM4 488 aa10.78□□□□□ -0.68
APTX-219ENST00000474658 C16orf70Q9BSU1 422 aa10.78□□□□□ -0.68
APTX-219ENST00000474658 SEZ6LQ9BYH1 1024 aa10.78□□□□□ -0.68
APTX-219ENST00000474658 DDX25Q9UHL0 483 aaKnown RBP10.78□□□□□ -0.68
APTX-219ENST00000474658 MROH7Q68CQ1 1323 aa10.78□□□□□ -0.68
APTX-219ENST00000474658 H3BRB1 525 aa10.77□□□□□ -0.69
APTX-219ENST00000474658 SLC37A4O43826 429 aa10.77□□□□□ -0.69
APTX-219ENST00000474658 CCNT1O60563 726 aaKnown RBP10.77□□□□□ -0.69
APTX-219ENST00000474658 CCNE2O96020 404 aa10.77□□□□□ -0.69
APTX-219ENST00000474658 CD4P01730 458 aa10.77□□□□□ -0.69
APTX-219ENST00000474658 CLTBP09497 229 aa10.77□□□□□ -0.69
APTX-219ENST00000474658 ACTR2P61160 394 aa10.77□□□□□ -0.69
APTX-219ENST00000474658 PPP4R3AQ6IN85 833 aa10.77□□□□□ -0.69
APTX-219ENST00000474658 NFRKBQ6P4R8 1299 aa10.77□□□□□ -0.69
APTX-219ENST00000474658 TRIM50Q86XT4 487 aa10.77□□□□□ -0.69
APTX-219ENST00000474658 SLC5A5Q92911 643 aa10.77□□□□□ -0.69
APTX-219ENST00000474658 GJA10Q969M2 543 aa10.77□□□□□ -0.69
APTX-219ENST00000474658 KATNAL1Q9BW62 490 aa10.77□□□□□ -0.69
APTX-219ENST00000474658 TRPV6Q9H1D0 765 aa10.77□□□□□ -0.69
APTX-219ENST00000474658 FOXP1Q9H334 677 aaPredicted RBP10.77□□□□□ -0.69
APTX-219ENST00000474658 TUT1Q9H6E5 874 aaKnown RBP10.77□□□□□ -0.69
APTX-219ENST00000474658 PRDM5Q9NQX1 630 aaPredicted RBP10.77□□□□□ -0.69
APTX-219ENST00000474658 PDLIM7Q9NR12 457 aa10.77□□□□□ -0.69
APTX-219ENST00000474658 TBC1D22BQ9NU19 505 aa10.77□□□□□ -0.69
APTX-219ENST00000474658 TMEM39AQ9NV64 488 aa10.77□□□□□ -0.69
APTX-219ENST00000474658 SCN10AQ9Y5Y9 1956 aa10.77□□□□□ -0.69
APTX-219ENST00000474658 TRIM43BA6NCK2 446 aa10.76□□□□□ -0.69
APTX-219ENST00000474658 KIF28PB7ZC32 967 aa10.76□□□□□ -0.69
APTX-219ENST00000474658 WNT7AO00755 349 aa10.76□□□□□ -0.69
APTX-219ENST00000474658 TLR3O15455 904 aaKnown RBP10.76□□□□□ -0.69
APTX-219ENST00000474658 B4GALT4O60513 344 aa10.76□□□□□ -0.69
APTX-219ENST00000474658 ATG7O95352 703 aa10.76□□□□□ -0.69
APTX-219ENST00000474658 GCFC2P16383 781 aaKnown RBP10.76□□□□□ -0.69
APTX-219ENST00000474658 ATP2B1P20020 1258 aa10.76□□□□□ -0.69
APTX-219ENST00000474658 PTPN11Q06124 597 aaPredicted RBP10.76□□□□□ -0.69
APTX-219ENST00000474658 GNL2Q13823 731 aaKnown RBP10.76□□□□□ -0.69
APTX-219ENST00000474658 ABHD15Q6UXT9 468 aa10.76□□□□□ -0.69
APTX-219ENST00000474658 C7orf31Q8N865 590 aa10.76□□□□□ -0.69
APTX-219ENST00000474658 ETNPPLQ8TBG4 499 aa10.76□□□□□ -0.69
APTX-219ENST00000474658 TRIM43Q96BQ3 446 aaPredicted RBP10.76□□□□□ -0.69
APTX-219ENST00000474658 PCYT2Q99447 389 aa10.76□□□□□ -0.69
APTX-219ENST00000474658 NAP1L4Q99733 375 aaKnown RBP10.76□□□□□ -0.69
APTX-219ENST00000474658 TRMT13Q9NUP7 481 aaKnown RBP10.76□□□□□ -0.69
APTX-219ENST00000474658 HDAC6Q9UBN7 1215 aa10.76□□□□□ -0.69
APTX-219ENST00000474658 PRKAG2Q9UGJ0 569 aa10.76□□□□□ -0.69
APTX-219ENST00000474658 H3BQV1 296 aa10.75□□□□□ -0.69
APTX-219ENST00000474658 KIAA0355O15063 1070 aa10.75□□□□□ -0.69
APTX-219ENST00000474658 GAS7O60861 476 aa10.75□□□□□ -0.69
APTX-219ENST00000474658 LGR5O75473 907 aa10.75□□□□□ -0.69
APTX-219ENST00000474658 PSMD10O75832 226 aa10.75□□□□□ -0.69
APTX-219ENST00000474658 U2AF2P26368 475 aaKnown RBP eCLIP10.75□□□□□ -0.699e-15■■■■■ 42.9
APTX-219ENST00000474658 KRT76Q01546 638 aa10.75□□□□□ -0.69
APTX-219ENST00000474658 HIC1Q14526 733 aa10.75□□□□□ -0.69
APTX-219ENST00000474658 PRPF38BQ5VTL8 546 aaKnown RBP10.75□□□□□ -0.69
APTX-219ENST00000474658 LRCH2Q5VUJ6 765 aa10.75□□□□□ -0.69
APTX-219ENST00000474658 LARP1BQ659C4 914 aaKnown RBP10.75□□□□□ -0.69
APTX-219ENST00000474658 MCTP1Q6DN14 999 aa10.75□□□□□ -0.69
APTX-219ENST00000474658 GDF6Q6KF10 455 aaPredicted RBP10.75□□□□□ -0.69
APTX-219ENST00000474658 ZNF746Q6NUN9 644 aaPredicted RBP10.75□□□□□ -0.69
APTX-219ENST00000474658 SESTD1Q86VW0 696 aa10.75□□□□□ -0.69
APTX-219ENST00000474658 NOSTRINQ8IVI9 506 aa10.75□□□□□ -0.69
APTX-219ENST00000474658 HSCBQ8IWL3 235 aa10.75□□□□□ -0.69
APTX-219ENST00000474658 GLG1Q92896 1179 aa10.75□□□□□ -0.69
APTX-219ENST00000474658 INTS4Q96HW7 963 aaKnown RBP10.75□□□□□ -0.69
APTX-219ENST00000474658 RIT2Q99578 217 aa10.75□□□□□ -0.69
APTX-219ENST00000474658 TEKT3Q9BXF9 490 aa10.75□□□□□ -0.69
APTX-219ENST00000474658 RNPEPQ9H4A4 650 aa10.75□□□□□ -0.69
APTX-219ENST00000474658 SMARCAD1Q9H4L7 1026 aa10.75□□□□□ -0.69
APTX-219ENST00000474658 KCNMB3Q9NPA1 279 aa10.75□□□□□ -0.69
APTX-219ENST00000474658 GTF2IRD1Q9UHL9 959 aa10.75□□□□□ -0.69
APTX-219ENST00000474658 TBX21Q9UL17 535 aa10.75□□□□□ -0.69
APTX-219ENST00000474658 ZNF215Q9UL58 517 aaPredicted RBP10.75□□□□□ -0.69
APTX-219ENST00000474658 EMSYQ7Z589 1322 aa10.75□□□□□ -0.69
APTX-219ENST00000474658 IGKV6D-21A0A0A0MT36 114 aa10.74□□□□□ -0.69
APTX-219ENST00000474658 CHMP2AO43633 222 aa10.74□□□□□ -0.69
APTX-219ENST00000474658 MARCH6O60337 910 aa10.74□□□□□ -0.69
APTX-219ENST00000474658 SUPT20HL2P0C7V6 817 aa10.74□□□□□ -0.69
APTX-219ENST00000474658 SMIM10L2AP0DMW4 78 aa10.74□□□□□ -0.69
APTX-219ENST00000474658 SMIM10L2BP0DMW5 78 aa10.74□□□□□ -0.69
APTX-219ENST00000474658 CYP2C9P11712 490 aa10.74□□□□□ -0.69
APTX-219ENST00000474658 RAG1P15918 1043 aa10.74□□□□□ -0.69
APTX-219ENST00000474658 ITGB8P26012 769 aa10.74□□□□□ -0.69
APTX-219ENST00000474658 MARK3P27448 753 aa10.74□□□□□ -0.69
APTX-219ENST00000474658 STAT5BP51692 787 aa10.74□□□□□ -0.69
APTX-219ENST00000474658 ZNF200P98182 395 aaPredicted RBP10.74□□□□□ -0.69
APTX-219ENST00000474658 MDM2Q00987 491 aaPredicted RBP10.74□□□□□ -0.69
APTX-219ENST00000474658 PTGISQ16647 500 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms