RNA–Protein interactions for RNA: ENST00000456369.5

CHEK2-221, Transcript of checkpoint kinase 2, human

TSL 3

Gene CHEK2, Length 588 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHEK2-221	ENST00000456369	BICD2	Q8TD16	824 aa		11.34	□□□□□ -0.59
CHEK2-221	ENST00000456369	AFG1L	Q8WV93	481 aa		11.34	□□□□□ -0.59
CHEK2-221	ENST00000456369	GPRASP2	Q96D09	838 aa		11.34	□□□□□ -0.59
CHEK2-221	ENST00000456369	GLT1D1	Q96MS3	346 aa		11.34	□□□□□ -0.59
CHEK2-221	ENST00000456369	SENP7	Q9BQF6	1050 aa		11.34	□□□□□ -0.59
CHEK2-221	ENST00000456369	PHF20	Q9BVI0	1012 aa		11.34	□□□□□ -0.59
CHEK2-221	ENST00000456369	JADE2	Q9NQC1	790 aa		11.34	□□□□□ -0.59
CHEK2-221	ENST00000456369	GJB4	Q9NTQ9	266 aa		11.34	□□□□□ -0.59
CHEK2-221	ENST00000456369	ORC3	Q9UBD5	711 aa	Predicted RBP	11.34	□□□□□ -0.59
CHEK2-221	ENST00000456369	PCDHA4	Q9UN74	947 aa		11.34	□□□□□ -0.59
CHEK2-221	ENST00000456369	PPP1R3G	B7ZBB8	358 aa		11.33	□□□□□ -0.6
CHEK2-221	ENST00000456369	FAM86B1	E9PN63	330 aa		11.33	□□□□□ -0.6
CHEK2-221	ENST00000456369		H0YGN5	161 aa		11.33	□□□□□ -0.6
CHEK2-221	ENST00000456369	MEIS1	O00470	390 aa		11.33	□□□□□ -0.6
CHEK2-221	ENST00000456369	ZEB2	O60315	1214 aa		11.33	□□□□□ -0.6
CHEK2-221	ENST00000456369	ATP9A	O75110	1047 aa		11.33	□□□□□ -0.6
CHEK2-221	ENST00000456369	CABYR	O75952	493 aa		11.33	□□□□□ -0.6
CHEK2-221	ENST00000456369	BAG4	O95429	457 aa	Known RBP	11.33	□□□□□ -0.6
CHEK2-221	ENST00000456369	GGPS1	O95749	300 aa		11.33	□□□□□ -0.6
CHEK2-221	ENST00000456369	MMP3	P08254	477 aa		11.33	□□□□□ -0.6
CHEK2-221	ENST00000456369	CYP3A4	P08684	503 aa		11.33	□□□□□ -0.6
CHEK2-221	ENST00000456369	FAM86B2	P0C5J1	330 aa		11.33	□□□□□ -0.6
CHEK2-221	ENST00000456369	KCNA2	P16389	499 aa		11.33	□□□□□ -0.6
CHEK2-221	ENST00000456369	ARHGAP4	P98171	946 aa		11.33	□□□□□ -0.6
CHEK2-221	ENST00000456369	MTMR1	Q13613	665 aa		11.33	□□□□□ -0.6
CHEK2-221	ENST00000456369	HSDL1	Q3SXM5	330 aa		11.33	□□□□□ -0.6
CHEK2-221	ENST00000456369	TRIM60	Q495X7	471 aa		11.33	□□□□□ -0.6
CHEK2-221	ENST00000456369	CEP55	Q53EZ4	464 aa		11.33	□□□□□ -0.6
CHEK2-221	ENST00000456369	ANKRD33	Q7Z3H0	272 aa		11.33	□□□□□ -0.6
CHEK2-221	ENST00000456369	DHX37	Q8IY37	1157 aa	Known RBP	11.33	□□□□□ -0.6
CHEK2-221	ENST00000456369	RASGRP4	Q8TDF6	673 aa		11.33	□□□□□ -0.6
CHEK2-221	ENST00000456369	LLPH	Q9BRT6	129 aa	Known RBP	11.33	□□□□□ -0.6
CHEK2-221	ENST00000456369	EHMT1	Q9H9B1	1298 aa		11.33	□□□□□ -0.6
CHEK2-221	ENST00000456369	STARD7	Q9NQZ5	370 aa		11.33	□□□□□ -0.6
CHEK2-221	ENST00000456369	KCNJ14	Q9UNX9	436 aa		11.33	□□□□□ -0.6
CHEK2-221	ENST00000456369	SMC3	Q9UQE7	1217 aa		11.33	□□□□□ -0.6
CHEK2-221	ENST00000456369	TELO2	Q9Y4R8	837 aa		11.33	□□□□□ -0.6
CHEK2-221	ENST00000456369	IGLV3-22	A0A075B6J6	115 aa		11.32	□□□□□ -0.6
CHEK2-221	ENST00000456369	MAFG	O15525	162 aa		11.32	□□□□□ -0.6
CHEK2-221	ENST00000456369	KPNA6	O60684	536 aa		11.32	□□□□□ -0.6
CHEK2-221	ENST00000456369	PDC	P20941	246 aa		11.32	□□□□□ -0.6
CHEK2-221	ENST00000456369	CIITA	P33076	1130 aa		11.32	□□□□□ -0.6
CHEK2-221	ENST00000456369	RTP1	P59025	263 aa		11.32	□□□□□ -0.6
CHEK2-221	ENST00000456369	PRPF38B	Q5VTL8	546 aa	Known RBP	11.32	□□□□□ -0.6
CHEK2-221	ENST00000456369	METTL7B	Q6UX53	244 aa		11.32	□□□□□ -0.6
CHEK2-221	ENST00000456369	NIPA1	Q7RTP0	329 aa		11.32	□□□□□ -0.6
CHEK2-221	ENST00000456369	NLRX1	Q86UT6	975 aa		11.32	□□□□□ -0.6
CHEK2-221	ENST00000456369	CCDC83	Q8IWF9	413 aa		11.32	□□□□□ -0.6
CHEK2-221	ENST00000456369	C7orf61	Q8IZ16	206 aa		11.32	□□□□□ -0.6
CHEK2-221	ENST00000456369	BLID	Q8IZY5	108 aa		11.32	□□□□□ -0.6
CHEK2-221	ENST00000456369	WASF1	Q92558	559 aa		11.32	□□□□□ -0.6
CHEK2-221	ENST00000456369	CDHR1	Q96JP9	859 aa		11.32	□□□□□ -0.6
CHEK2-221	ENST00000456369	TOX2	Q96NM4	488 aa		11.32	□□□□□ -0.6
CHEK2-221	ENST00000456369	MXRA8	Q9BRK3	442 aa		11.32	□□□□□ -0.6
CHEK2-221	ENST00000456369	ALG1	Q9BT22	464 aa		11.32	□□□□□ -0.6
CHEK2-221	ENST00000456369	KCNH7	Q9NS40	1196 aa		11.32	□□□□□ -0.6
CHEK2-221	ENST00000456369	POLR3E	Q9NVU0	708 aa		11.32	□□□□□ -0.6
CHEK2-221	ENST00000456369	NR2E3	Q9Y5X4	410 aa		11.32	□□□□□ -0.6
CHEK2-221	ENST00000456369		A0A0U1RQG5	324 aa	Predicted RBP	11.31	□□□□□ -0.6
CHEK2-221	ENST00000456369	ARVCF	O00192	962 aa		11.31	□□□□□ -0.6
CHEK2-221	ENST00000456369	PPFIA4	O75335	1185 aa		11.31	□□□□□ -0.6
CHEK2-221	ENST00000456369	AR	P10275	920 aa		11.31	□□□□□ -0.6
CHEK2-221	ENST00000456369	PSMC6	P62333	389 aa		11.31	□□□□□ -0.6
CHEK2-221	ENST00000456369	TLE2	Q04725	743 aa		11.31	□□□□□ -0.6
CHEK2-221	ENST00000456369	ITGA7	Q13683	1181 aa		11.31	□□□□□ -0.6
CHEK2-221	ENST00000456369	NEDD9	Q14511	834 aa		11.31	□□□□□ -0.6
CHEK2-221	ENST00000456369	BRDT	Q58F21	947 aa	Predicted RBP	11.31	□□□□□ -0.6
CHEK2-221	ENST00000456369	KAT2B	Q92831	832 aa		11.31	□□□□□ -0.6
CHEK2-221	ENST00000456369	TNFRSF25	Q93038	417 aa		11.31	□□□□□ -0.6
CHEK2-221	ENST00000456369	LENG9	Q96B70	501 aa		11.31	□□□□□ -0.6
CHEK2-221	ENST00000456369	SPATA33	Q96N06	139 aa		11.31	□□□□□ -0.6
CHEK2-221	ENST00000456369	MTG1	Q9BT17	334 aa	Predicted RBP	11.31	□□□□□ -0.6
CHEK2-221	ENST00000456369	CDHR5	Q9HBB8	845 aa		11.31	□□□□□ -0.6
CHEK2-221	ENST00000456369	ZDHHC9	Q9Y397	364 aa		11.31	□□□□□ -0.6
CHEK2-221	ENST00000456369	ATP6V1D	Q9Y5K8	247 aa		11.31	□□□□□ -0.6
CHEK2-221	ENST00000456369	PDE4DIP	Q5VU43	2346 aa		11.31	□□□□□ -0.6
CHEK2-221	ENST00000456369	LAMA3	Q16787	3333 aa		11.3	□□□□□ -0.6
CHEK2-221	ENST00000456369	TRAK2	O60296	914 aa		11.3	□□□□□ -0.6
CHEK2-221	ENST00000456369	SORBS3	O60504	671 aa		11.3	□□□□□ -0.6
CHEK2-221	ENST00000456369	F2	P00734	622 aa		11.3	□□□□□ -0.6
CHEK2-221	ENST00000456369	CD4	P01730	458 aa		11.3	□□□□□ -0.6
CHEK2-221	ENST00000456369	MYL3	P08590	195 aa		11.3	□□□□□ -0.6
CHEK2-221	ENST00000456369	XBP1	P17861	261 aa		11.3	□□□□□ -0.6
CHEK2-221	ENST00000456369	USP11	P51784	963 aa		11.3	□□□□□ -0.6
CHEK2-221	ENST00000456369	FAAP100	Q0VG06	881 aa		11.3	□□□□□ -0.6
CHEK2-221	ENST00000456369	ITGB3BP	Q13352	177 aa	Predicted RBP	11.3	□□□□□ -0.6
CHEK2-221	ENST00000456369	DGKD	Q16760	1214 aa		11.3	□□□□□ -0.6
CHEK2-221	ENST00000456369	CYFIP1	Q7L576	1253 aa		11.3	□□□□□ -0.6
CHEK2-221	ENST00000456369	FAM126B	Q8IXS8	530 aa		11.3	□□□□□ -0.6
CHEK2-221	ENST00000456369	GIMAP8	Q8ND71	665 aa	Predicted RBP	11.3	□□□□□ -0.6
CHEK2-221	ENST00000456369	TBCK	Q8TEA7	893 aa		11.3	□□□□□ -0.6
CHEK2-221	ENST00000456369	GPR20	Q99678	358 aa		11.3	□□□□□ -0.6
CHEK2-221	ENST00000456369	C16orf70	Q9BSU1	422 aa		11.3	□□□□□ -0.6
CHEK2-221	ENST00000456369	SEZ6L	Q9BYH1	1024 aa		11.3	□□□□□ -0.6
CHEK2-221	ENST00000456369	MLXIP	Q9HAP2	919 aa		11.3	□□□□□ -0.6
CHEK2-221	ENST00000456369	AGO4	Q9HCK5	861 aa	Known RBP	11.3	□□□□□ -0.6
CHEK2-221	ENST00000456369	PDLIM7	Q9NR12	457 aa		11.3	□□□□□ -0.6
CHEK2-221	ENST00000456369	ATP11B	Q9Y2G3	1177 aa		11.3	□□□□□ -0.6
CHEK2-221	ENST00000456369	CYP3A7-CYP3A51P	A0A087WV96	503 aa		11.29	□□□□□ -0.6
CHEK2-221	ENST00000456369	TRIM43B	A6NCK2	446 aa		11.29	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms