RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 CCDC47Q96A33 483 aaKnown RBP10.5□□□□□ -0.73
CUX1-206ENST00000437600 NDST4Q9H3R1 872 aa10.5□□□□□ -0.73
CUX1-206ENST00000437600 ANKZF1Q9H8Y5 726 aa10.5□□□□□ -0.73
CUX1-206ENST00000437600 ITIH6Q6UXX5 1313 aa10.5□□□□□ -0.73
CUX1-206ENST00000437600 DNAH12Q6ZR08 3092 aa10.5□□□□□ -0.73
CUX1-206ENST00000437600 MEIS2O14770 477 aa10.5□□□□□ -0.73
CUX1-206ENST00000437600 PHACTR2O75167 634 aa10.5□□□□□ -0.73
CUX1-206ENST00000437600 MED24O75448 989 aa10.5□□□□□ -0.73
CUX1-206ENST00000437600 TBC1D8O95759 1140 aa10.5□□□□□ -0.73
CUX1-206ENST00000437600 IRX5P78411 483 aaPredicted RBP10.5□□□□□ -0.73
CUX1-206ENST00000437600 CNNM4Q6P4Q7 775 aa10.5□□□□□ -0.73
CUX1-206ENST00000437600 SRGAP1Q7Z6B7 1085 aa10.5□□□□□ -0.73
CUX1-206ENST00000437600 FBXO11Q86XK2 927 aa10.5□□□□□ -0.73
CUX1-206ENST00000437600 DCAF4Q8WV16 495 aa10.5□□□□□ -0.73
CUX1-206ENST00000437600 PANK4Q9NVE7 773 aa10.5□□□□□ -0.73
CUX1-206ENST00000437600 RGL1Q9NZL6 768 aa10.5□□□□□ -0.73
CUX1-206ENST00000437600 ADM5C9JUS6 153 aa10.5□□□□□ -0.73
CUX1-206ENST00000437600 FAM86B1E9PN63 330 aa10.5□□□□□ -0.73
CUX1-206ENST00000437600 CHMP2AO43633 222 aa10.5□□□□□ -0.73
CUX1-206ENST00000437600 TUBB4AP04350 444 aa10.5□□□□□ -0.73
CUX1-206ENST00000437600 KRT18P05783 430 aaKnown RBP10.5□□□□□ -0.73
CUX1-206ENST00000437600 FAM86B2P0C5J1 330 aa10.5□□□□□ -0.73
CUX1-206ENST00000437600 CASP5P51878 434 aa10.5□□□□□ -0.73
CUX1-206ENST00000437600 KCNA1Q09470 495 aa10.5□□□□□ -0.73
CUX1-206ENST00000437600 CENPPQ6IPU0 288 aa10.5□□□□□ -0.73
CUX1-206ENST00000437600 GOLGA1Q92805 767 aa10.5□□□□□ -0.73
CUX1-206ENST00000437600 MTMR8Q96EF0 704 aa10.5□□□□□ -0.73
CUX1-206ENST00000437600 TEPSINQ96N21 525 aa10.5□□□□□ -0.73
CUX1-206ENST00000437600 MMS19Q96T76 1030 aa10.5□□□□□ -0.73
CUX1-206ENST00000437600 NAPGQ99747 312 aaPredicted RBP10.5□□□□□ -0.73
CUX1-206ENST00000437600 AMNQ9BXJ7 453 aa10.5□□□□□ -0.73
CUX1-206ENST00000437600 ANO3Q9BYT9 981 aa10.5□□□□□ -0.73
CUX1-206ENST00000437600 MLXIPQ9HAP2 919 aa10.5□□□□□ -0.73
CUX1-206ENST00000437600 JADE2Q9NQC1 790 aa10.5□□□□□ -0.73
CUX1-206ENST00000437600 EHD2Q9NZN4 543 aa10.5□□□□□ -0.73
CUX1-206ENST00000437600 HERC5Q9UII4 1024 aaKnown RBP10.5□□□□□ -0.73
CUX1-206ENST00000437600 MYH7BA7E2Y1 1941 aa10.49□□□□□ -0.73
CUX1-206ENST00000437600 ZRANB2O95218 330 aaKnown RBP eCLIP10.49□□□□□ -0.73
CUX1-206ENST00000437600 STAT2P52630 851 aa10.49□□□□□ -0.73
CUX1-206ENST00000437600 KSR1Q8IVT5 923 aa10.49□□□□□ -0.73
CUX1-206ENST00000437600 PIGOQ8TEQ8 1089 aa10.49□□□□□ -0.73
CUX1-206ENST00000437600 CCDC42Q96M95 316 aa10.49□□□□□ -0.73
CUX1-206ENST00000437600 SH2D3AQ9BRG2 576 aa10.49□□□□□ -0.73
CUX1-206ENST00000437600 ZNF341Q9BYN7 854 aa10.49□□□□□ -0.73
CUX1-206ENST00000437600 ARHGEF10LQ9HCE6 1279 aa10.49□□□□□ -0.73
CUX1-206ENST00000437600 ARGLU1Q9NWB6 273 aaPredicted RBP10.49□□□□□ -0.73
CUX1-206ENST00000437600 ARHGAP20Q9P2F6 1191 aa10.49□□□□□ -0.73
CUX1-206ENST00000437600 MYO6Q9UM54 1294 aa10.49□□□□□ -0.73
CUX1-206ENST00000437600 RSPH10B2B2RC85 870 aa10.49□□□□□ -0.73
CUX1-206ENST00000437600 OPLAHO14841 1288 aa10.49□□□□□ -0.73
CUX1-206ENST00000437600 BUB1O43683 1085 aa10.49□□□□□ -0.73
CUX1-206ENST00000437600 N4BP1O75113 896 aaKnown RBP10.49□□□□□ -0.73
CUX1-206ENST00000437600 RSPH10BP0C881 870 aa10.49□□□□□ -0.73
CUX1-206ENST00000437600 CLK2P49760 499 aaKnown RBP10.49□□□□□ -0.73
CUX1-206ENST00000437600 RNASE9P60153 205 aaKnown RBP10.49□□□□□ -0.73
CUX1-206ENST00000437600 GFPT1Q06210 699 aaPredicted RBP10.49□□□□□ -0.73
CUX1-206ENST00000437600 UNC13DQ70J99 1090 aa10.49□□□□□ -0.73
CUX1-206ENST00000437600 CPXCR1Q8N123 301 aa10.49□□□□□ -0.73
CUX1-206ENST00000437600 GPR161Q8N6U8 529 aaKnown RBP10.49□□□□□ -0.73
CUX1-206ENST00000437600 MTMR14Q8NCE2 650 aa10.49□□□□□ -0.73
CUX1-206ENST00000437600 ZKSCAN4Q969J2 545 aaPredicted RBP10.49□□□□□ -0.73
CUX1-206ENST00000437600 DNAJC19Q96DA6 116 aa10.49□□□□□ -0.73
CUX1-206ENST00000437600 DNAJC7Q99615 494 aa10.49□□□□□ -0.73
CUX1-206ENST00000437600 ABCB6Q9NP58 842 aa10.49□□□□□ -0.73
CUX1-206ENST00000437600 HOMER2Q9NSB8 354 aa10.49□□□□□ -0.73
CUX1-206ENST00000437600 PKD2L1Q9P0L9 805 aa10.49□□□□□ -0.73
CUX1-206ENST00000437600 BICDL2A1A5D9 508 aa10.48□□□□□ -0.73
CUX1-206ENST00000437600 LRRC53A6NM62 1247 aa10.48□□□□□ -0.73
CUX1-206ENST00000437600 NPM3O75607 178 aaKnown RBP10.48□□□□□ -0.73
CUX1-206ENST00000437600 INPP5BP32019 993 aa10.48□□□□□ -0.73
CUX1-206ENST00000437600 FXR2P51116 673 aaKnown RBP eCLIP10.48□□□□□ -0.73
CUX1-206ENST00000437600 VSNL1P62760 191 aa10.48□□□□□ -0.73
CUX1-206ENST00000437600 COASYQ13057 564 aa10.48□□□□□ -0.73
CUX1-206ENST00000437600 TERF2Q15554 542 aa10.48□□□□□ -0.73
CUX1-206ENST00000437600 VWA3BQ502W6 1294 aa10.48□□□□□ -0.73
CUX1-206ENST00000437600 GPBP1Q86WP2 473 aa10.48□□□□□ -0.73
CUX1-206ENST00000437600 CATSPER3Q86XQ3 398 aa10.48□□□□□ -0.73
CUX1-206ENST00000437600 GSPT2Q8IYD1 628 aaKnown RBP10.48□□□□□ -0.73
CUX1-206ENST00000437600 CCDC51Q96ER9 411 aa10.48□□□□□ -0.73
CUX1-206ENST00000437600 TTYH3Q9C0H2 523 aa10.48□□□□□ -0.73
CUX1-206ENST00000437600 ARFGAP3Q9NP61 516 aa10.48□□□□□ -0.73
CUX1-206ENST00000437600 ZNHIT6Q9NWK9 470 aaKnown RBP10.48□□□□□ -0.73
CUX1-206ENST00000437600 SALL4Q9UJQ4 1053 aa10.48□□□□□ -0.73
CUX1-206ENST00000437600 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.48□□□□□ -0.73
CUX1-206ENST00000437600 PLA2G4BP0C869 781 aa10.48□□□□□ -0.73
CUX1-206ENST00000437600 EIF4A3P38919 411 aaKnown RBP10.48□□□□□ -0.73
CUX1-206ENST00000437600 CAP2P40123 477 aa10.48□□□□□ -0.73
CUX1-206ENST00000437600 NAP1L1P55209 391 aaKnown RBP10.48□□□□□ -0.73
CUX1-206ENST00000437600 LONRF2Q1L5Z9 754 aa10.48□□□□□ -0.73
CUX1-206ENST00000437600 GMCL1P1Q8NEA9 526 aa10.48□□□□□ -0.73
CUX1-206ENST00000437600 JAKMIP2Q96AA8 810 aa10.48□□□□□ -0.73
CUX1-206ENST00000437600 DEF6Q9H4E7 631 aa10.48□□□□□ -0.73
CUX1-206ENST00000437600 GREB1LQ9C091 1923 aaPredicted RBP10.47□□□□□ -0.73
CUX1-206ENST00000437600 CCDC66A2RUB6 948 aa10.47□□□□□ -0.73
CUX1-206ENST00000437600 SPDYE3A6NKU9 549 aa10.47□□□□□ -0.73
CUX1-206ENST00000437600 hCG_1984214I3L0E3 225 aa10.47□□□□□ -0.73
CUX1-206ENST00000437600 PDE2AO00408 941 aaPredicted RBP10.47□□□□□ -0.73
CUX1-206ENST00000437600 NCK2O43639 380 aa10.47□□□□□ -0.73
CUX1-206ENST00000437600 MYCNP04198 464 aaPredicted RBP10.47□□□□□ -0.73
CUX1-206ENST00000437600 ACTN1P12814 892 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms