RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 CDC37Q16543 378 aaPredicted RBP8.91□□□□□ -0.98
VTI1A-202ENST00000432306 TCP11X2Q5H9J9 407 aa8.91□□□□□ -0.98
VTI1A-202ENST00000432306 INTS5Q6P9B9 1019 aaKnown RBP8.91□□□□□ -0.98
VTI1A-202ENST00000432306 LDHDQ86WU2 507 aa8.91□□□□□ -0.98
VTI1A-202ENST00000432306 CD302Q8IX05 232 aa8.91□□□□□ -0.98
VTI1A-202ENST00000432306 TRIM22Q8IYM9 498 aa8.91□□□□□ -0.98
VTI1A-202ENST00000432306 CRACR2BQ8N4Y2 399 aaPredicted RBP8.91□□□□□ -0.98
VTI1A-202ENST00000432306 C3orf20Q8ND61 904 aa8.91□□□□□ -0.98
VTI1A-202ENST00000432306 ISCA1Q9BUE6 129 aa8.91□□□□□ -0.98
VTI1A-202ENST00000432306 TTYH3Q9C0H2 523 aa8.91□□□□□ -0.98
VTI1A-202ENST00000432306 ENAMQ9NRM1 1142 aa8.91□□□□□ -0.98
VTI1A-202ENST00000432306 DONSONQ9NYP3 566 aa8.91□□□□□ -0.98
VTI1A-202ENST00000432306 ABCF2Q9UG63 623 aa8.91□□□□□ -0.98
VTI1A-202ENST00000432306 SYNPO2Q9UMS6 1093 aa8.91□□□□□ -0.98
VTI1A-202ENST00000432306 PCDHB6Q9Y5E3 794 aa8.91□□□□□ -0.98
VTI1A-202ENST00000432306 PDE4DIPQ5VU43 2346 aa8.91□□□□□ -0.98
VTI1A-202ENST00000432306 LTBP3Q9NS15 1303 aa8.9□□□□□ -0.98
VTI1A-202ENST00000432306 RIC1Q4ADV7 1423 aa8.9□□□□□ -0.98
VTI1A-202ENST00000432306 A0A087X0B3 334 aa8.9□□□□□ -0.98
VTI1A-202ENST00000432306 TCRBV5S4A2TA0A5A2 114 aa8.9□□□□□ -0.98
VTI1A-202ENST00000432306 SHTN1A0MZ66 631 aa8.9□□□□□ -0.98
VTI1A-202ENST00000432306 ATP5J2-PTCD1G3V325 749 aa8.9□□□□□ -0.98
VTI1A-202ENST00000432306 RNF225M0QZC1 329 aaPredicted RBP8.9□□□□□ -0.98
VTI1A-202ENST00000432306 N4BP3O15049 544 aa8.9□□□□□ -0.98
VTI1A-202ENST00000432306 TFRCP02786 760 aaKnown RBP8.9□□□□□ -0.98
VTI1A-202ENST00000432306 ATP1A1P05023 1023 aaKnown RBP8.9□□□□□ -0.98
VTI1A-202ENST00000432306 EEF1GP26641 437 aaKnown RBP8.9□□□□□ -0.98
VTI1A-202ENST00000432306 HNRNPH3P31942 346 aaKnown RBP8.9□□□□□ -0.98
VTI1A-202ENST00000432306 MAP2K1Q02750 393 aaPredicted RBP8.9□□□□□ -0.98
VTI1A-202ENST00000432306 FKBP4Q02790 459 aaKnown RBP eCLIP8.9□□□□□ -0.98
VTI1A-202ENST00000432306 FUT2Q10981 343 aa8.9□□□□□ -0.98
VTI1A-202ENST00000432306 PAK1Q13153 545 aa8.9□□□□□ -0.98
VTI1A-202ENST00000432306 DRP2Q13474 957 aa8.9□□□□□ -0.98
VTI1A-202ENST00000432306 NBPF9Q3BBW0 867 aa8.9□□□□□ -0.98
VTI1A-202ENST00000432306 GLE1Q53GS7 698 aaKnown RBP8.9□□□□□ -0.98
VTI1A-202ENST00000432306 HSP90AA4PQ58FG1 418 aa8.9□□□□□ -0.98
VTI1A-202ENST00000432306 C10orf62Q5T681 223 aaPredicted RBP8.9□□□□□ -0.98
VTI1A-202ENST00000432306 ZNF658Q5TYW1 1059 aaPredicted RBP8.9□□□□□ -0.98
VTI1A-202ENST00000432306 WDR59Q6PJI9 974 aa8.9□□□□□ -0.98
VTI1A-202ENST00000432306 KRT77Q7Z794 578 aa8.9□□□□□ -0.98
VTI1A-202ENST00000432306 MICU3Q86XE3 530 aa8.9□□□□□ -0.98
VTI1A-202ENST00000432306 TTC5Q8N0Z6 440 aa8.9□□□□□ -0.98
VTI1A-202ENST00000432306 MREGQ8N565 214 aa8.9□□□□□ -0.98
VTI1A-202ENST00000432306 NKX2-3Q8TAU0 364 aa8.9□□□□□ -0.98
VTI1A-202ENST00000432306 NUP58Q9BVL2 599 aa8.9□□□□□ -0.98
VTI1A-202ENST00000432306 TSGA10Q9BZW7 698 aa8.9□□□□□ -0.98
VTI1A-202ENST00000432306 KRT23Q9C075 422 aa8.9□□□□□ -0.98
VTI1A-202ENST00000432306 RETREG1Q9H6L5 497 aa8.9□□□□□ -0.98
VTI1A-202ENST00000432306 RMND1Q9NWS8 449 aa8.9□□□□□ -0.98
VTI1A-202ENST00000432306 SLC12A7Q9Y666 1083 aa8.9□□□□□ -0.98
VTI1A-202ENST00000432306 PDS5AQ29RF7 1337 aaKnown RBP8.9□□□□□ -0.99
VTI1A-202ENST00000432306 A0A1W2PQJ5 194 aa8.89□□□□□ -0.99
VTI1A-202ENST00000432306 TRIM75PA6NK02 468 aa8.89□□□□□ -0.99
VTI1A-202ENST00000432306 LGALS16A8MUM7 142 aa8.89□□□□□ -0.99
VTI1A-202ENST00000432306 CCDC172P0C7W6 258 aa8.89□□□□□ -0.99
VTI1A-202ENST00000432306 MYBL2P10244 700 aa8.89□□□□□ -0.99
VTI1A-202ENST00000432306 HSPA8P11142 646 aaKnown RBP8.89□□□□□ -0.99
VTI1A-202ENST00000432306 INPP5BP32019 993 aa8.89□□□□□ -0.99
VTI1A-202ENST00000432306 CCT5P48643 541 aa8.89□□□□□ -0.99
VTI1A-202ENST00000432306 EPHB4P54760 987 aa8.89□□□□□ -0.99
VTI1A-202ENST00000432306 SCARF1Q14162 830 aa8.89□□□□□ -0.99
VTI1A-202ENST00000432306 SIM2Q14190 667 aaPredicted RBP8.89□□□□□ -0.99
VTI1A-202ENST00000432306 TMEM67Q5HYA8 995 aa8.89□□□□□ -0.99
VTI1A-202ENST00000432306 SPECC1Q5M775 1068 aa8.89□□□□□ -0.99
VTI1A-202ENST00000432306 CCDC70Q6NSX1 233 aa8.89□□□□□ -0.99
VTI1A-202ENST00000432306 USP49Q70CQ1 688 aa8.89□□□□□ -0.99
VTI1A-202ENST00000432306 ANKMY2Q8IV38 441 aa8.89□□□□□ -0.99
VTI1A-202ENST00000432306 GRAMD1CQ8IYS0 662 aa8.89□□□□□ -0.99
VTI1A-202ENST00000432306 IFNL3Q8IZI9 196 aa8.89□□□□□ -0.99
VTI1A-202ENST00000432306 CCDC155Q8N6L0 562 aa8.89□□□□□ -0.99
VTI1A-202ENST00000432306 EIF1ADQ8N9N8 165 aaKnown RBP8.89□□□□□ -0.99
VTI1A-202ENST00000432306 BCAS4Q8TDM0 211 aa8.89□□□□□ -0.99
VTI1A-202ENST00000432306 TNFRSF25Q93038 417 aa8.89□□□□□ -0.99
VTI1A-202ENST00000432306 JAKMIP2Q96AA8 810 aa8.89□□□□□ -0.99
VTI1A-202ENST00000432306 SRPK1Q96SB4 655 aaKnown RBP8.89□□□□□ -0.99
VTI1A-202ENST00000432306 STRBPQ96SI9 672 aaKnown RBP8.89□□□□□ -0.99
VTI1A-202ENST00000432306 NUP88Q99567 741 aaPredicted RBP8.89□□□□□ -0.99
VTI1A-202ENST00000432306 DUSP9Q99956 384 aaKnown RBP8.89□□□□□ -0.99
VTI1A-202ENST00000432306 SLF1Q9BQI6 1058 aa8.89□□□□□ -0.99
VTI1A-202ENST00000432306 SLC26A6Q9BXS9 759 aa8.89□□□□□ -0.99
VTI1A-202ENST00000432306 TAOK3Q9H2K8 898 aa8.89□□□□□ -0.99
VTI1A-202ENST00000432306 CXorf56Q9H5V9 222 aa8.89□□□□□ -0.99
VTI1A-202ENST00000432306 SENP2Q9HC62 589 aa8.89□□□□□ -0.99
VTI1A-202ENST00000432306 INTUQ9ULD6 942 aa8.89□□□□□ -0.99
VTI1A-202ENST00000432306 XDHP47989 1333 aa8.89□□□□□ -0.99
VTI1A-202ENST00000432306 TMCO5BA8MYB1 307 aa8.88□□□□□ -0.99
VTI1A-202ENST00000432306 B4E1Z4 1266 aa8.88□□□□□ -0.99
VTI1A-202ENST00000432306 KCNJ18B7U540 433 aa8.88□□□□□ -0.99
VTI1A-202ENST00000432306 MEFVO15553 781 aaPredicted RBP8.88□□□□□ -0.99
VTI1A-202ENST00000432306 RNASEH2AO75792 299 aaKnown RBP8.88□□□□□ -0.99
VTI1A-202ENST00000432306 DDNO94850 711 aaPredicted RBP8.88□□□□□ -0.99
VTI1A-202ENST00000432306 LCA5LO95447 670 aa8.88□□□□□ -0.99
VTI1A-202ENST00000432306 GUCY1A2P33402 732 aa8.88□□□□□ -0.99
VTI1A-202ENST00000432306 CYLC1P35663 651 aaPredicted RBP8.88□□□□□ -0.99
VTI1A-202ENST00000432306 MCAMP43121 646 aa8.88□□□□□ -0.99
VTI1A-202ENST00000432306 RGS19P49795 217 aa8.88□□□□□ -0.99
VTI1A-202ENST00000432306 ATP2C1P98194 919 aaPredicted RBP8.88□□□□□ -0.99
VTI1A-202ENST00000432306 AKAP17AQ02040 695 aaKnown RBP8.88□□□□□ -0.99
VTI1A-202ENST00000432306 KCNJ12Q14500 433 aa8.88□□□□□ -0.99
VTI1A-202ENST00000432306 KCNB1Q14721 858 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms