RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 COMMD10Q9Y6G5 202 aa14.33□□□□□ -0.11
PTPRN2-202ENST00000389416 MED1Q15648 1581 aaPredicted RBP14.33□□□□□ -0.11
PTPRN2-202ENST00000389416 TLDC2A0PJX2 215 aa14.33□□□□□ -0.12
PTPRN2-202ENST00000389416 H2AFZP0C0S5 128 aa14.33□□□□□ -0.12
PTPRN2-202ENST00000389416 CAP2P40123 477 aa14.33□□□□□ -0.12
PTPRN2-202ENST00000389416 SNX16P57768 344 aa14.33□□□□□ -0.12
PTPRN2-202ENST00000389416 NBPF12Q5TAG4 269 aaPredicted RBP14.33□□□□□ -0.12
PTPRN2-202ENST00000389416 H2AFVQ71UI9 128 aa14.33□□□□□ -0.12
PTPRN2-202ENST00000389416 RAD54LQ92698 747 aa14.33□□□□□ -0.12
PTPRN2-202ENST00000389416 HUNKP57058 714 aa14.33□□□□□ -0.12
PTPRN2-202ENST00000389416 TAF1CQ15572 869 aaPredicted RBP14.33□□□□□ -0.12
PTPRN2-202ENST00000389416 POTEAQ6S8J7 498 aa14.33□□□□□ -0.12
PTPRN2-202ENST00000389416 THNSL1Q8IYQ7 743 aa14.33□□□□□ -0.12
PTPRN2-202ENST00000389416 IPO4Q8TEX9 1081 aaKnown RBP14.33□□□□□ -0.12
PTPRN2-202ENST00000389416 BBXQ8WY36 941 aaPredicted RBP14.33□□□□□ -0.12
PTPRN2-202ENST00000389416 PPP2R2CQ9Y2T4 447 aa14.33□□□□□ -0.12
PTPRN2-202ENST00000389416 SHTN1A0MZ66 631 aa14.33□□□□□ -0.12
PTPRN2-202ENST00000389416 PDE6CP51160 858 aa14.33□□□□□ -0.12
PTPRN2-202ENST00000389416 ZNF157P51786 506 aaPredicted RBP14.33□□□□□ -0.12
PTPRN2-202ENST00000389416 RBL2Q08999 1139 aa14.33□□□□□ -0.12
PTPRN2-202ENST00000389416 FAM205AQ6ZU69 1335 aa14.33□□□□□ -0.12
PTPRN2-202ENST00000389416 FAM193BQ96PV7 902 aaPredicted RBP14.33□□□□□ -0.12
PTPRN2-202ENST00000389416 PSMD1Q99460 953 aa14.33□□□□□ -0.12
PTPRN2-202ENST00000389416 NACA2Q9H009 215 aa14.33□□□□□ -0.12
PTPRN2-202ENST00000389416 NXF1Q9UBU9 619 aaKnown RBP14.33□□□□□ -0.12
PTPRN2-202ENST00000389416 FBXO2Q9UK22 296 aaPredicted RBP14.33□□□□□ -0.12
PTPRN2-202ENST00000389416 FAM184BQ9ULE4 1060 aa14.33□□□□□ -0.12
PTPRN2-202ENST00000389416 SMIM23A6NLE4 172 aa14.32□□□□□ -0.12
PTPRN2-202ENST00000389416 RIOK3O14730 519 aaKnown RBP14.32□□□□□ -0.12
PTPRN2-202ENST00000389416 DAPK3O43293 454 aa14.32□□□□□ -0.12
PTPRN2-202ENST00000389416 PRCPP42785 496 aa14.32□□□□□ -0.12
PTPRN2-202ENST00000389416 MXI1P50539 228 aa14.32□□□□□ -0.12
PTPRN2-202ENST00000389416 TTLL4Q14679 1199 aa14.32□□□□□ -0.12
PTPRN2-202ENST00000389416 ZRSR2Q15696 482 aaKnown RBP14.32□□□□□ -0.12
PTPRN2-202ENST00000389416 KLHL7Q8IXQ5 586 aa14.32□□□□□ -0.12
PTPRN2-202ENST00000389416 EIF2AK1Q9BQI3 630 aaKnown RBP14.32□□□□□ -0.12
PTPRN2-202ENST00000389416 TM4SF1P30408 202 aa14.32□□□□□ -0.12
PTPRN2-202ENST00000389416 C8orf74Q6P047 294 aa14.32□□□□□ -0.12
PTPRN2-202ENST00000389416 ANKRD13AQ8IZ07 590 aa14.32□□□□□ -0.12
PTPRN2-202ENST00000389416 CACTINQ8WUQ7 758 aaKnown RBP14.32□□□□□ -0.12
PTPRN2-202ENST00000389416 NAP1L3Q99457 506 aaPredicted RBP14.32□□□□□ -0.12
PTPRN2-202ENST00000389416 NDST4Q9H3R1 872 aa14.32□□□□□ -0.12
PTPRN2-202ENST00000389416 HESX1Q9UBX0 185 aa14.32□□□□□ -0.12
PTPRN2-202ENST00000389416 FMN2Q9NZ56 1722 aa14.32□□□□□ -0.12
PTPRN2-202ENST00000389416 IFT172Q9UG01 1749 aa14.32□□□□□ -0.12
PTPRN2-202ENST00000389416 EZRP15311 586 aaKnown RBP14.32□□□□□ -0.12
PTPRN2-202ENST00000389416 LRRC63Q05C16 580 aa14.32□□□□□ -0.12
PTPRN2-202ENST00000389416 EXOC8Q8IYI6 725 aa14.32□□□□□ -0.12
PTPRN2-202ENST00000389416 MCPH1Q8NEM0 835 aa14.32□□□□□ -0.12
PTPRN2-202ENST00000389416 FAM107BQ9H098 131 aa14.32□□□□□ -0.12
PTPRN2-202ENST00000389416 PLEKHA4Q9H4M7 779 aa14.32□□□□□ -0.12
PTPRN2-202ENST00000389416 SLC16A4O15374 487 aa14.32□□□□□ -0.12
PTPRN2-202ENST00000389416 MYL3P08590 195 aa14.32□□□□□ -0.12
PTPRN2-202ENST00000389416 GRIK5Q16478 980 aa14.32□□□□□ -0.12
PTPRN2-202ENST00000389416 DAAM2Q86T65 1068 aa14.32□□□□□ -0.12
PTPRN2-202ENST00000389416 CCDC26Q8TAB7 109 aa14.32□□□□□ -0.12
PTPRN2-202ENST00000389416 AKT1S1Q96B36 256 aa14.32□□□□□ -0.12
PTPRN2-202ENST00000389416 MAD2L2Q9UI95 211 aa14.32□□□□□ -0.12
PTPRN2-202ENST00000389416 PTK2Q05397 1052 aa14.31□□□□□ -0.12
PTPRN2-202ENST00000389416 IFRD2Q12894 506 aaPredicted RBP14.31□□□□□ -0.12
PTPRN2-202ENST00000389416 KRT31Q15323 416 aa14.31□□□□□ -0.12
PTPRN2-202ENST00000389416 DACT2Q5SW24 774 aa14.31□□□□□ -0.12
PTPRN2-202ENST00000389416 GCNT4Q9P109 453 aa14.31□□□□□ -0.12
PTPRN2-202ENST00000389416 NFAT5O94916 1531 aa14.31□□□□□ -0.12
PTPRN2-202ENST00000389416 TNPO2O14787 897 aaKnown RBP14.31□□□□□ -0.12
PTPRN2-202ENST00000389416 NR3C2P08235 984 aa14.31□□□□□ -0.12
PTPRN2-202ENST00000389416 MAP2K1Q02750 393 aaPredicted RBP14.31□□□□□ -0.12
PTPRN2-202ENST00000389416 ORC2Q13416 577 aaPredicted RBP14.31□□□□□ -0.12
PTPRN2-202ENST00000389416 SNAPC2Q13487 334 aa14.31□□□□□ -0.12
PTPRN2-202ENST00000389416 CCDC77Q9BR77 488 aa14.31□□□□□ -0.12
PTPRN2-202ENST00000389416 MED10Q9BTT4 135 aa14.31□□□□□ -0.12
PTPRN2-202ENST00000389416 ZNF302Q9NR11 478 aa14.31□□□□□ -0.12
PTPRN2-202ENST00000389416 PYCARDQ9ULZ3 195 aa14.31□□□□□ -0.12
PTPRN2-202ENST00000389416 CCDC66A2RUB6 948 aa14.31□□□□□ -0.12
PTPRN2-202ENST00000389416 ABI1Q8IZP0 508 aa14.31□□□□□ -0.12
PTPRN2-202ENST00000389416 KCNB2Q92953 911 aa14.31□□□□□ -0.12
PTPRN2-202ENST00000389416 PCDHA10Q9Y5I2 948 aa14.31□□□□□ -0.12
PTPRN2-202ENST00000389416 PIK3C2AO00443 1686 aa14.31□□□□□ -0.12
PTPRN2-202ENST00000389416 CELF2O95319 508 aaKnown RBP14.3□□□□□ -0.12
PTPRN2-202ENST00000389416 SFNP31947 248 aa14.3□□□□□ -0.12
PTPRN2-202ENST00000389416 COASYQ13057 564 aa14.3□□□□□ -0.12
PTPRN2-202ENST00000389416 ZNF365Q70YC5 407 aa14.3□□□□□ -0.12
PTPRN2-202ENST00000389416 CATSPER4Q7RTX7 472 aa14.3□□□□□ -0.12
PTPRN2-202ENST00000389416 SPATA33Q96N06 139 aa14.3□□□□□ -0.12
PTPRN2-202ENST00000389416 ZMYND12Q9H0C1 365 aa14.3□□□□□ -0.12
PTPRN2-202ENST00000389416 ATP6V0A4Q9HBG4 840 aa14.3□□□□□ -0.12
PTPRN2-202ENST00000389416 DDX4Q9NQI0 724 aaKnown RBP14.3□□□□□ -0.12
PTPRN2-202ENST00000389416 MTRF1LQ9UGC7 380 aaKnown RBP14.3□□□□□ -0.12
PTPRN2-202ENST00000389416 PCDHB4Q9Y5E5 795 aa14.3□□□□□ -0.12
PTPRN2-202ENST00000389416 TLR3O15455 904 aaKnown RBP14.3□□□□□ -0.12
PTPRN2-202ENST00000389416 ATF7P17544 494 aaPredicted RBP14.3□□□□□ -0.12
PTPRN2-202ENST00000389416 PNMA8AQ86V59 439 aaPredicted RBP14.3□□□□□ -0.12
PTPRN2-202ENST00000389416 SCYL3Q8IZE3 742 aa14.3□□□□□ -0.12
PTPRN2-202ENST00000389416 OTUD6BQ8N6M0 293 aa14.3□□□□□ -0.12
PTPRN2-202ENST00000389416 GIMAP8Q8ND71 665 aaPredicted RBP14.3□□□□□ -0.12
PTPRN2-202ENST00000389416 KIAA1524Q8TCG1 905 aa14.3□□□□□ -0.12
PTPRN2-202ENST00000389416 MSTO1Q9BUK6 570 aa14.3□□□□□ -0.12
PTPRN2-202ENST00000389416 MFAP3P55082 362 aa14.3□□□□□ -0.12
PTPRN2-202ENST00000389416 PSMC5P62195 406 aa14.3□□□□□ -0.12
PTPRN2-202ENST00000389416 SYCE1Q8N0S2 351 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms