RNA–Protein interactions for RNA: ENST00000374826.8

PMS1-202, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best) BASIC

Gene PMS1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-202ENST00000374826 BTN2A2Q8WVV5 523 aa6.67□□□□□ -1.34
PMS1-202ENST00000374826 NGRNQ9NPE2 291 aaKnown RBP6.67□□□□□ -1.34
PMS1-202ENST00000374826 CYP26B1Q9NR63 512 aa6.67□□□□□ -1.34
PMS1-202ENST00000374826 CCNB3Q8WWL7 1395 aa6.67□□□□□ -1.34
PMS1-202ENST00000374826 POGZQ7Z3K3 1410 aa6.67□□□□□ -1.34
PMS1-202ENST00000374826 DENND4BO75064 1496 aaPredicted RBP6.66□□□□□ -1.34
PMS1-202ENST00000374826 ZFYVE16Q7Z3T8 1539 aa6.66□□□□□ -1.34
PMS1-202ENST00000374826 CFAP65Q6ZU64 1925 aaKnown RBP6.66□□□□□ -1.34
PMS1-202ENST00000374826 TBX1O43435 398 aa6.66□□□□□ -1.34
PMS1-202ENST00000374826 ITGAVP06756 1048 aa6.66□□□□□ -1.34
PMS1-202ENST00000374826 CR1LQ2VPA4 569 aa6.66□□□□□ -1.34
PMS1-202ENST00000374826 ANKS3Q6ZW76 656 aa6.66□□□□□ -1.34
PMS1-202ENST00000374826 FAM126BQ8IXS8 530 aa6.66□□□□□ -1.34
PMS1-202ENST00000374826 PPP4R1LQ9P1A2 415 aa6.66□□□□□ -1.34
PMS1-202ENST00000374826 TSC22D4Q9Y3Q8 395 aa6.66□□□□□ -1.34
PMS1-202ENST00000374826 ARHGEF12Q9NZN5 1544 aa6.66□□□□□ -1.34
PMS1-202ENST00000374826 DIP2CQ9Y2E4 1556 aa6.65□□□□□ -1.34
PMS1-202ENST00000374826 BCORL1Q5H9F3 1711 aa6.65□□□□□ -1.34
PMS1-202ENST00000374826 LAMTOR5O43504 91 aa6.65□□□□□ -1.34
PMS1-202ENST00000374826 B4GALT3O60512 393 aa6.65□□□□□ -1.34
PMS1-202ENST00000374826 C6P13671 934 aa6.65□□□□□ -1.34
PMS1-202ENST00000374826 STAT5AP42229 794 aa6.65□□□□□ -1.34
PMS1-202ENST00000374826 CYP4F3Q08477 520 aa6.65□□□□□ -1.34
PMS1-202ENST00000374826 MROH9Q5TGP6 573 aa6.65□□□□□ -1.34
PMS1-202ENST00000374826 IQCEQ6IPM2 695 aa6.65□□□□□ -1.34
PMS1-202ENST00000374826 EEPD1Q7L9B9 569 aa6.65□□□□□ -1.34
PMS1-202ENST00000374826 RIOX2Q8IUF8 465 aa6.65□□□□□ -1.34
PMS1-202ENST00000374826 FRS2Q8WU20 508 aa6.65□□□□□ -1.34
PMS1-202ENST00000374826 KISS1RQ969F8 398 aaPredicted RBP6.65□□□□□ -1.34
PMS1-202ENST00000374826 SCAND2PQ9GZW5 306 aaPredicted RBP6.65□□□□□ -1.34
PMS1-202ENST00000374826 TIMM13Q9Y5L4 95 aaPredicted RBP6.65□□□□□ -1.34
PMS1-202ENST00000374826 PHLDB1Q86UU1 1377 aa6.65□□□□□ -1.35
PMS1-202ENST00000374826 SCAPERQ9BY12 1400 aa6.65□□□□□ -1.35
PMS1-202ENST00000374826 ZNF518AQ6AHZ1 1483 aa6.65□□□□□ -1.35
PMS1-202ENST00000374826 ARHGEF5Q12774 1597 aa6.65□□□□□ -1.35
PMS1-202ENST00000374826 DNMT1P26358 1616 aaKnown RBP6.65□□□□□ -1.35
PMS1-202ENST00000374826 RIMS1Q86UR5 1692 aaKnown RBP6.65□□□□□ -1.35
PMS1-202ENST00000374826 SNRPB2P08579 225 aaKnown RBP6.64□□□□□ -1.35
PMS1-202ENST00000374826 ZNF28P17035 718 aa6.64□□□□□ -1.35
PMS1-202ENST00000374826 HOXC12P31275 282 aa6.64□□□□□ -1.35
PMS1-202ENST00000374826 IL13P35225 146 aa6.64□□□□□ -1.35
PMS1-202ENST00000374826 ZC3H6P61129 1189 aaKnown RBP6.64□□□□□ -1.35
PMS1-202ENST00000374826 NKX3-2P78367 333 aa6.64□□□□□ -1.35
PMS1-202ENST00000374826 ADAM9Q13443 819 aa6.64□□□□□ -1.35
PMS1-202ENST00000374826 CDSNQ15517 529 aa6.64□□□□□ -1.35
PMS1-202ENST00000374826 PRAMEF18Q5VWM3 479 aa6.64□□□□□ -1.35
PMS1-202ENST00000374826 CEP68Q76N32 757 aa6.64□□□□□ -1.35
PMS1-202ENST00000374826 CELF2-AS1Q8N7Q2 184 aa6.64□□□□□ -1.35
PMS1-202ENST00000374826 NPLOC4Q8TAT6 608 aa6.64□□□□□ -1.35
PMS1-202ENST00000374826 EPN3Q9H201 632 aa6.64□□□□□ -1.35
PMS1-202ENST00000374826 ST7Q9NRC1 585 aa6.64□□□□□ -1.35
PMS1-202ENST00000374826 X6R8D5 127 aa6.64□□□□□ -1.35
PMS1-202ENST00000374826 MYOM3Q5VTT5 1437 aa6.64□□□□□ -1.35
PMS1-202ENST00000374826 ATP7AQ04656 1500 aa6.64□□□□□ -1.35
PMS1-202ENST00000374826 NPEPPSL1A6NEC2 478 aa6.63□□□□□ -1.35
PMS1-202ENST00000374826 RAPGEF3O95398 923 aa6.63□□□□□ -1.35
PMS1-202ENST00000374826 TACR2P21452 398 aa6.63□□□□□ -1.35
PMS1-202ENST00000374826 GDF5P43026 501 aa6.63□□□□□ -1.35
PMS1-202ENST00000374826 RPL11P62913 178 aaKnown RBP6.63□□□□□ -1.35
PMS1-202ENST00000374826 ICAM4Q14773 271 aa6.63□□□□□ -1.35
PMS1-202ENST00000374826 DDR2Q16832 855 aa6.63□□□□□ -1.35
PMS1-202ENST00000374826 SLC10A6Q3KNW5 377 aa6.63□□□□□ -1.35
PMS1-202ENST00000374826 EFCAB2Q5VUJ9 269 aa6.63□□□□□ -1.35
PMS1-202ENST00000374826 E4F1Q66K89 784 aaPredicted RBP6.63□□□□□ -1.35
PMS1-202ENST00000374826 PLEKHH2Q8IVE3 1493 aa6.63□□□□□ -1.35
PMS1-202ENST00000374826 Q8N1X5 172 aa6.63□□□□□ -1.35
PMS1-202ENST00000374826 MADDQ8WXG6 1647 aa6.63□□□□□ -1.35
PMS1-202ENST00000374826 TRAPPC8Q9Y2L5 1435 aa6.63□□□□□ -1.35
PMS1-202ENST00000374826 ADAMTSL3P82987 1691 aa6.62□□□□□ -1.35
PMS1-202ENST00000374826 YEATS2Q9ULM3 1422 aa6.62□□□□□ -1.35
PMS1-202ENST00000374826 AGRPO00253 132 aa6.62□□□□□ -1.35
PMS1-202ENST00000374826 ARNTLO00327 626 aa6.62□□□□□ -1.35
PMS1-202ENST00000374826 KLF4O43474 513 aa6.62□□□□□ -1.35
PMS1-202ENST00000374826 CYP1A1P04798 512 aaPredicted RBP6.62□□□□□ -1.35
PMS1-202ENST00000374826 SCG5P05408 212 aa6.62□□□□□ -1.35
PMS1-202ENST00000374826 FPR2P25090 351 aa6.62□□□□□ -1.35
PMS1-202ENST00000374826 ACVRL1P37023 503 aa6.62□□□□□ -1.35
PMS1-202ENST00000374826 ECI1P42126 302 aa6.62□□□□□ -1.35
PMS1-202ENST00000374826 HMGA2P52926 109 aa6.62□□□□□ -1.35
PMS1-202ENST00000374826 NAALADL2Q58DX5 795 aa6.62□□□□□ -1.35
PMS1-202ENST00000374826 PLEKHH3Q7Z736 793 aa6.62□□□□□ -1.35
PMS1-202ENST00000374826 Q8N1Y9 231 aa6.62□□□□□ -1.35
PMS1-202ENST00000374826 MBD6Q96DN6 1003 aa6.62□□□□□ -1.35
PMS1-202ENST00000374826 TRMT2BQ96GJ1 504 aaKnown RBP6.62□□□□□ -1.35
PMS1-202ENST00000374826 KLC2Q9H0B6 622 aa6.62□□□□□ -1.35
PMS1-202ENST00000374826 CD248Q9HCU0 757 aa6.62□□□□□ -1.35
PMS1-202ENST00000374826 CFDP1Q9UEE9 299 aaPredicted RBP6.62□□□□□ -1.35
PMS1-202ENST00000374826 CEP152O94986 1710 aa6.62□□□□□ -1.35
PMS1-202ENST00000374826 MAST1Q9Y2H9 1570 aa6.61□□□□□ -1.35
PMS1-202ENST00000374826 CCDC141Q6ZP82 1450 aa6.61□□□□□ -1.35
PMS1-202ENST00000374826 ZNF644Q9H582 1327 aaPredicted RBP6.61□□□□□ -1.35
PMS1-202ENST00000374826 GPR42O15529 346 aa6.61□□□□□ -1.35
PMS1-202ENST00000374826 MEFVO15553 781 aaPredicted RBP6.61□□□□□ -1.35
PMS1-202ENST00000374826 CPP00450 1065 aa6.61□□□□□ -1.35
PMS1-202ENST00000374826 BCL6P41182 706 aa6.61□□□□□ -1.35
PMS1-202ENST00000374826 KCNJ6P48051 423 aa6.61□□□□□ -1.35
PMS1-202ENST00000374826 GFRA1P56159 465 aa6.61□□□□□ -1.35
PMS1-202ENST00000374826 PPP2CBP62714 309 aa6.61□□□□□ -1.35
PMS1-202ENST00000374826 PPP2CAP67775 309 aa6.61□□□□□ -1.35
PMS1-202ENST00000374826 SF1Q15637 639 aaKnown RBP6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms