RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 LUZP1Q86V48 1076 aa16.5■□□□□ 0.23
CDK5RAP3-201ENST00000338399 TPH2Q8IWU9 490 aa16.5■□□□□ 0.23
CDK5RAP3-201ENST00000338399 TRIML1Q8N9V2 468 aa16.5■□□□□ 0.23
CDK5RAP3-201ENST00000338399 C7orf25Q9BPX7 421 aa16.5■□□□□ 0.23
CDK5RAP3-201ENST00000338399 TUFT1Q9NNX1 390 aa16.5■□□□□ 0.23
CDK5RAP3-201ENST00000338399 COBLO75128 1261 aa16.5■□□□□ 0.23
CDK5RAP3-201ENST00000338399 RPN1P04843 607 aaKnown RBP16.5■□□□□ 0.23
CDK5RAP3-201ENST00000338399 TM4SF4P48230 202 aa16.5■□□□□ 0.23
CDK5RAP3-201ENST00000338399 EEPD1Q7L9B9 569 aa16.5■□□□□ 0.23
CDK5RAP3-201ENST00000338399 ABRAQ8N0Z2 381 aa16.5■□□□□ 0.23
CDK5RAP3-201ENST00000338399 TRIM9Q9C026 710 aa16.5■□□□□ 0.23
CDK5RAP3-201ENST00000338399 BCAS3Q9H6U6 928 aa16.5■□□□□ 0.23
CDK5RAP3-201ENST00000338399 DNM3Q9UQ16 869 aa16.5■□□□□ 0.23
CDK5RAP3-201ENST00000338399 SAMM50Q9Y512 469 aa16.5■□□□□ 0.23
CDK5RAP3-201ENST00000338399 MYMKA6NI61 221 aa16.49■□□□□ 0.23
CDK5RAP3-201ENST00000338399 TLR2O60603 784 aa16.49■□□□□ 0.23
CDK5RAP3-201ENST00000338399 ECM2O94769 699 aaPredicted RBP16.49■□□□□ 0.23
CDK5RAP3-201ENST00000338399 SSBP05455 408 aaKnown RBP eCLIP16.49■□□□□ 0.23
CDK5RAP3-201ENST00000338399 PLA2G4BP0C869 781 aa16.49■□□□□ 0.23
CDK5RAP3-201ENST00000338399 MAPK4P31152 587 aa16.49■□□□□ 0.23
CDK5RAP3-201ENST00000338399 ICAM3P32942 547 aa16.49■□□□□ 0.23
CDK5RAP3-201ENST00000338399 ZNF792Q3KQV3 632 aa16.49■□□□□ 0.23
CDK5RAP3-201ENST00000338399 PLEKHH3Q7Z736 793 aa16.49■□□□□ 0.23
CDK5RAP3-201ENST00000338399 NAT10Q9H0A0 1025 aaKnown RBP16.49■□□□□ 0.23
CDK5RAP3-201ENST00000338399 ZFYVE28Q9HCC9 887 aa16.49■□□□□ 0.23
CDK5RAP3-201ENST00000338399 TCEAL9Q9UHQ7 104 aa16.49■□□□□ 0.23
CDK5RAP3-201ENST00000338399 KLRC4O43908 158 aa16.48■□□□□ 0.23
CDK5RAP3-201ENST00000338399 CCNE2O96020 404 aa16.48■□□□□ 0.23
CDK5RAP3-201ENST00000338399 ASIC1P78348 528 aa16.48■□□□□ 0.23
CDK5RAP3-201ENST00000338399 KRT76Q01546 638 aa16.48■□□□□ 0.23
CDK5RAP3-201ENST00000338399 SP2Q02086 613 aa16.48■□□□□ 0.23
CDK5RAP3-201ENST00000338399 C17orf99Q6UX52 265 aa16.48■□□□□ 0.23
CDK5RAP3-201ENST00000338399 DYMQ7RTS9 669 aa16.48■□□□□ 0.23
CDK5RAP3-201ENST00000338399 BANK1Q8NDB2 785 aa16.48■□□□□ 0.23
CDK5RAP3-201ENST00000338399 NFASCO94856 1347 aa16.48■□□□□ 0.23
CDK5RAP3-201ENST00000338399 WDR81Q562E7 1941 aa16.48■□□□□ 0.23
CDK5RAP3-201ENST00000338399 DOCK3Q8IZD9 2030 aa16.48■□□□□ 0.23
CDK5RAP3-201ENST00000338399 SORBS3O60504 671 aa16.48■□□□□ 0.23
CDK5RAP3-201ENST00000338399 IQCB1Q15051 598 aa16.48■□□□□ 0.23
CDK5RAP3-201ENST00000338399 DEFB115Q30KQ5 88 aa16.48■□□□□ 0.23
CDK5RAP3-201ENST00000338399 KMT5BQ4FZB7 885 aa16.48■□□□□ 0.23
CDK5RAP3-201ENST00000338399 NEK9Q8TD19 979 aa16.48■□□□□ 0.23
CDK5RAP3-201ENST00000338399 LXNQ9BS40 222 aa16.48■□□□□ 0.23
CDK5RAP3-201ENST00000338399 LRRC27Q9C0I9 530 aa16.48■□□□□ 0.23
CDK5RAP3-201ENST00000338399 WRAP73Q9P2S5 460 aaPredicted RBP16.48■□□□□ 0.23
CDK5RAP3-201ENST00000338399 ASB14A6NK59 587 aa16.47■□□□□ 0.23
CDK5RAP3-201ENST00000338399 P4HBP07237 508 aaKnown RBP16.47■□□□□ 0.23
CDK5RAP3-201ENST00000338399 JAK3P52333 1124 aa16.47■□□□□ 0.23
CDK5RAP3-201ENST00000338399 SLC12A3P55017 1021 aa16.47■□□□□ 0.23
CDK5RAP3-201ENST00000338399 CRHR2Q13324 411 aa16.47■□□□□ 0.23
CDK5RAP3-201ENST00000338399 GRB14Q14449 540 aa16.47■□□□□ 0.23
CDK5RAP3-201ENST00000338399 UVSSAQ2YD98 709 aa16.47■□□□□ 0.23
CDK5RAP3-201ENST00000338399 ZNF746Q6NUN9 644 aaPredicted RBP16.47■□□□□ 0.23
CDK5RAP3-201ENST00000338399 DPP9Q86TI2 863 aa16.47■□□□□ 0.23
CDK5RAP3-201ENST00000338399 MLKLQ8NB16 471 aa16.47■□□□□ 0.23
CDK5RAP3-201ENST00000338399 MORC4Q8TE76 937 aa16.47■□□□□ 0.23
CDK5RAP3-201ENST00000338399 PIGOQ8TEQ8 1089 aa16.47■□□□□ 0.23
CDK5RAP3-201ENST00000338399 DDX12PQ92771 950 aa16.47■□□□□ 0.23
CDK5RAP3-201ENST00000338399 JPH1Q9HDC5 661 aaPredicted RBP16.47■□□□□ 0.23
CDK5RAP3-201ENST00000338399 RMND1Q9NWS8 449 aa16.47■□□□□ 0.23
CDK5RAP3-201ENST00000338399 LOC102724159A0A0B4J2E5 919 aa16.46■□□□□ 0.23
CDK5RAP3-201ENST00000338399 WDR64B1ANS9 1081 aa16.46■□□□□ 0.23
CDK5RAP3-201ENST00000338399 ZBTB39O15060 712 aa16.46■□□□□ 0.23
CDK5RAP3-201ENST00000338399 AOC2O75106 756 aa16.46■□□□□ 0.23
CDK5RAP3-201ENST00000338399 EYA4O95677 639 aa16.46■□□□□ 0.23
CDK5RAP3-201ENST00000338399 MUTP22033 750 aa16.46■□□□□ 0.23
CDK5RAP3-201ENST00000338399 SFNP31947 248 aa16.46■□□□□ 0.23
CDK5RAP3-201ENST00000338399 SP4Q02446 784 aa16.46■□□□□ 0.23
CDK5RAP3-201ENST00000338399 PWP2Q15269 919 aaKnown RBP16.46■□□□□ 0.23
CDK5RAP3-201ENST00000338399 GPBP1Q86WP2 473 aa16.46■□□□□ 0.23
CDK5RAP3-201ENST00000338399 DHX40Q8IX18 779 aaKnown RBP16.46■□□□□ 0.23
CDK5RAP3-201ENST00000338399 SMYD4Q8IYR2 804 aaPredicted RBP16.46■□□□□ 0.23
CDK5RAP3-201ENST00000338399 KCTD17Q8N5Z5 321 aa16.46■□□□□ 0.23
CDK5RAP3-201ENST00000338399 AOPEPQ8N6M6 819 aa16.46■□□□□ 0.23
CDK5RAP3-201ENST00000338399 SYT2Q8N9I0 419 aaPredicted RBP16.46■□□□□ 0.23
CDK5RAP3-201ENST00000338399 SENP7Q9BQF6 1050 aa16.46■□□□□ 0.23
CDK5RAP3-201ENST00000338399 CREBZFQ9NS37 354 aa16.46■□□□□ 0.23
CDK5RAP3-201ENST00000338399 SLC9A2Q9UBY0 812 aa16.46■□□□□ 0.23
CDK5RAP3-201ENST00000338399 TELO2Q9Y4R8 837 aa16.46■□□□□ 0.23
CDK5RAP3-201ENST00000338399 RASSF10A6NK89 507 aa16.46■□□□□ 0.22
CDK5RAP3-201ENST00000338399 BECN2A8MW95 431 aa16.46■□□□□ 0.22
CDK5RAP3-201ENST00000338399 APLP1P51693 650 aa16.46■□□□□ 0.22
CDK5RAP3-201ENST00000338399 NOGQ13253 232 aa16.46■□□□□ 0.22
CDK5RAP3-201ENST00000338399 KCNB1Q14721 858 aa16.46■□□□□ 0.22
CDK5RAP3-201ENST00000338399 ARMCX2Q7L311 632 aa16.46■□□□□ 0.22
CDK5RAP3-201ENST00000338399 CYFIP1Q7L576 1253 aa16.46■□□□□ 0.22
CDK5RAP3-201ENST00000338399 FBXO16Q8IX29 292 aaPredicted RBP16.46■□□□□ 0.22
CDK5RAP3-201ENST00000338399 CAPNS2Q96L46 248 aa16.46■□□□□ 0.22
CDK5RAP3-201ENST00000338399 NACC1Q96RE7 527 aa16.46■□□□□ 0.22
CDK5RAP3-201ENST00000338399 BPIFA3Q9BQP9 254 aa16.46■□□□□ 0.22
CDK5RAP3-201ENST00000338399 BHMT2Q9H2M3 363 aa16.46■□□□□ 0.22
CDK5RAP3-201ENST00000338399 DACH1Q9UI36 760 aa16.46■□□□□ 0.22
CDK5RAP3-201ENST00000338399 SLC15A5A6NIM6 579 aa16.45■□□□□ 0.22
CDK5RAP3-201ENST00000338399 CA12O43570 354 aa16.45■□□□□ 0.22
CDK5RAP3-201ENST00000338399 RHOBTB3O94955 611 aa16.45■□□□□ 0.22
CDK5RAP3-201ENST00000338399 CYP11B2P19099 503 aa16.45■□□□□ 0.22
CDK5RAP3-201ENST00000338399 UBA1P22314 1058 aaKnown RBP16.45■□□□□ 0.22
CDK5RAP3-201ENST00000338399 QARSP47897 775 aaKnown RBP16.45■□□□□ 0.22
CDK5RAP3-201ENST00000338399 ZNF658Q5TYW1 1059 aaPredicted RBP16.45■□□□□ 0.22
CDK5RAP3-201ENST00000338399 SMAP1Q8IYB5 467 aaPredicted RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms