RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 KCNJ12Q14500 433 aa12.95□□□□□ -0.34
SYNGAP1-201ENST00000293748 LONRF2Q1L5Z9 754 aa12.95□□□□□ -0.34
SYNGAP1-201ENST00000293748 AP1ARQ63HQ0 302 aa12.95□□□□□ -0.34
SYNGAP1-201ENST00000293748 SEPT14Q6ZU15 432 aa12.95□□□□□ -0.34
SYNGAP1-201ENST00000293748 SNX29Q8TEQ0 813 aa12.95□□□□□ -0.34
SYNGAP1-201ENST00000293748 DYNLL2Q96FJ2 89 aa12.95□□□□□ -0.34
SYNGAP1-201ENST00000293748 FAM207AQ9NSI2 230 aaPredicted RBP12.95□□□□□ -0.34
SYNGAP1-201ENST00000293748 IVNS1ABPQ9Y6Y0 642 aa12.95□□□□□ -0.34
SYNGAP1-201ENST00000293748 GUCY2FP51841 1108 aa12.95□□□□□ -0.34
SYNGAP1-201ENST00000293748 SNCBQ16143 134 aa12.95□□□□□ -0.34
SYNGAP1-201ENST00000293748 SPATA1Q5VX52 437 aa12.95□□□□□ -0.34
SYNGAP1-201ENST00000293748 TACO1Q9BSH4 297 aaKnown RBP12.95□□□□□ -0.34
SYNGAP1-201ENST00000293748 PHLPP2Q6ZVD8 1323 aa12.94□□□□□ -0.34
SYNGAP1-201ENST00000293748 CNTNAP1P78357 1384 aa12.94□□□□□ -0.34
SYNGAP1-201ENST00000293748 BCRP11274 1271 aa12.94□□□□□ -0.34
SYNGAP1-201ENST00000293748 CCT5P48643 541 aa12.94□□□□□ -0.34
SYNGAP1-201ENST00000293748 VEGFBP49765 207 aa12.94□□□□□ -0.34
SYNGAP1-201ENST00000293748 ATP1A2P50993 1020 aa12.94□□□□□ -0.34
SYNGAP1-201ENST00000293748 RASAL3Q86YV0 1011 aa12.94□□□□□ -0.34
SYNGAP1-201ENST00000293748 AFAP1L2Q8N4X5 818 aa12.94□□□□□ -0.34
SYNGAP1-201ENST00000293748 PPP1R13BQ96KQ4 1090 aa12.94□□□□□ -0.34
SYNGAP1-201ENST00000293748 COL2A1P02458 1487 aaPredicted RBP12.94□□□□□ -0.34
SYNGAP1-201ENST00000293748 LTBP1Q14766 1721 aa12.94□□□□□ -0.34
SYNGAP1-201ENST00000293748 B4DLN1 442 aa12.94□□□□□ -0.34
SYNGAP1-201ENST00000293748 TTLL1O95922 423 aa12.94□□□□□ -0.34
SYNGAP1-201ENST00000293748 CYP2D6P10635 497 aa12.94□□□□□ -0.34
SYNGAP1-201ENST00000293748 SNX16P57768 344 aa12.94□□□□□ -0.34
SYNGAP1-201ENST00000293748 CTDSPL2Q05D32 466 aa12.94□□□□□ -0.34
SYNGAP1-201ENST00000293748 ITIH3Q06033 890 aa12.94□□□□□ -0.34
SYNGAP1-201ENST00000293748 LZTS2Q9BRK4 669 aa12.94□□□□□ -0.34
SYNGAP1-201ENST00000293748 FANCLQ9NW38 375 aa12.94□□□□□ -0.34
SYNGAP1-201ENST00000293748 AK9Q5TCS8 1911 aa12.94□□□□□ -0.34
SYNGAP1-201ENST00000293748 CCDC169A6NNP5 214 aa12.94□□□□□ -0.34
SYNGAP1-201ENST00000293748 TXNDC9O14530 226 aa12.94□□□□□ -0.34
SYNGAP1-201ENST00000293748 CCNT1O60563 726 aaKnown RBP12.94□□□□□ -0.34
SYNGAP1-201ENST00000293748 CTCFP49711 727 aaPredicted RBP12.94□□□□□ -0.34
SYNGAP1-201ENST00000293748 FMR1Q06787 632 aaKnown RBP eCLIP12.94□□□□□ -0.34
SYNGAP1-201ENST00000293748 LDLRAD1Q5T700 205 aa12.94□□□□□ -0.34
SYNGAP1-201ENST00000293748 ZFPM1Q8IX07 1006 aa12.94□□□□□ -0.34
SYNGAP1-201ENST00000293748 CHURC1Q8WUH1 139 aa12.94□□□□□ -0.34
SYNGAP1-201ENST00000293748 EPN1Q9Y6I3 576 aaPredicted RBP12.94□□□□□ -0.34
SYNGAP1-201ENST00000293748 ZBED4O75132 1171 aa12.93□□□□□ -0.34
SYNGAP1-201ENST00000293748 SMTNP53814 917 aa12.93□□□□□ -0.34
SYNGAP1-201ENST00000293748 TRPC3Q13507 836 aa12.93□□□□□ -0.34
SYNGAP1-201ENST00000293748 PLS1Q14651 629 aa12.93□□□□□ -0.34
SYNGAP1-201ENST00000293748 CST9Q5W186 159 aa12.93□□□□□ -0.34
SYNGAP1-201ENST00000293748 CABP7Q86V35 215 aa12.93□□□□□ -0.34
SYNGAP1-201ENST00000293748 RNF168Q8IYW5 571 aaPredicted RBP12.93□□□□□ -0.34
SYNGAP1-201ENST00000293748 ODF2LQ9ULJ1 636 aa12.93□□□□□ -0.34
SYNGAP1-201ENST00000293748 STK38LQ9Y2H1 464 aa12.93□□□□□ -0.34
SYNGAP1-201ENST00000293748 NOSTRINQ8IVI9 506 aa12.93□□□□□ -0.34
SYNGAP1-201ENST00000293748 GBP7Q8N8V2 638 aaPredicted RBP12.93□□□□□ -0.34
SYNGAP1-201ENST00000293748 LPAR1Q92633 364 aa12.93□□□□□ -0.34
SYNGAP1-201ENST00000293748 EXOC7Q9UPT5 735 aa12.93□□□□□ -0.34
SYNGAP1-201ENST00000293748 ZMYM6O95789 1325 aa12.93□□□□□ -0.34
SYNGAP1-201ENST00000293748 MORC3Q14149 939 aa12.93□□□□□ -0.34
SYNGAP1-201ENST00000293748 SEPT2Q15019 361 aa12.93□□□□□ -0.34
SYNGAP1-201ENST00000293748 GABPB2Q8TAK5 448 aaPredicted RBP12.93□□□□□ -0.34
SYNGAP1-201ENST00000293748 EFCC1Q9HA90 598 aa12.93□□□□□ -0.34
SYNGAP1-201ENST00000293748 NLRC4Q9NPP4 1024 aa12.93□□□□□ -0.34
SYNGAP1-201ENST00000293748 SLC5A4Q9NY91 659 aa12.93□□□□□ -0.34
SYNGAP1-201ENST00000293748 PCDHA7Q9UN72 937 aa12.93□□□□□ -0.34
SYNGAP1-201ENST00000293748 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.93□□□□□ -0.34
SYNGAP1-201ENST00000293748 USP17L15C9J2P7 530 aa12.93□□□□□ -0.34
SYNGAP1-201ENST00000293748 USP17L13C9JLJ4 530 aa12.93□□□□□ -0.34
SYNGAP1-201ENST00000293748 USP17L11C9JVI0 530 aa12.93□□□□□ -0.34
SYNGAP1-201ENST00000293748 USP17L18D6R9N7 530 aa12.93□□□□□ -0.34
SYNGAP1-201ENST00000293748 USP17L22D6RA61 530 aa12.93□□□□□ -0.34
SYNGAP1-201ENST00000293748 USP17L17D6RBQ6 530 aa12.93□□□□□ -0.34
SYNGAP1-201ENST00000293748 USP17L19D6RCP7 530 aa12.93□□□□□ -0.34
SYNGAP1-201ENST00000293748 USP17L20D6RJB6 530 aa12.93□□□□□ -0.34
SYNGAP1-201ENST00000293748 IKBKBO14920 756 aa12.93□□□□□ -0.34
SYNGAP1-201ENST00000293748 USP17L24Q0WX57 530 aa12.93□□□□□ -0.34
SYNGAP1-201ENST00000293748 ZNF354CQ86Y25 554 aa12.93□□□□□ -0.34
SYNGAP1-201ENST00000293748 MRRFQ96E11 262 aaKnown RBP12.93□□□□□ -0.34
SYNGAP1-201ENST00000293748 TEPSINQ96N21 525 aa12.93□□□□□ -0.34
SYNGAP1-201ENST00000293748 LARSQ9P2J5 1176 aaKnown RBP12.93□□□□□ -0.34
SYNGAP1-201ENST00000293748 TPCN1Q9ULQ1 816 aa12.93□□□□□ -0.34
SYNGAP1-201ENST00000293748 MYH13Q9UKX3 1938 aa12.92□□□□□ -0.34
SYNGAP1-201ENST00000293748 KRIT1O00522 736 aa12.92□□□□□ -0.34
SYNGAP1-201ENST00000293748 ZWINTO95229 277 aa12.92□□□□□ -0.34
SYNGAP1-201ENST00000293748 PTPRAP18433 802 aa12.92□□□□□ -0.34
SYNGAP1-201ENST00000293748 ANKRD42Q8N9B4 389 aa12.92□□□□□ -0.34
SYNGAP1-201ENST00000293748 STAG1Q8WVM7 1258 aa12.92□□□□□ -0.34
SYNGAP1-201ENST00000293748 KCNJ14Q9UNX9 436 aa12.92□□□□□ -0.34
SYNGAP1-201ENST00000293748 CYP2D7A0A087X1C5 515 aa12.92□□□□□ -0.34
SYNGAP1-201ENST00000293748 SLC1A4P43007 532 aa12.92□□□□□ -0.34
SYNGAP1-201ENST00000293748 HMGCS2P54868 508 aa12.92□□□□□ -0.34
SYNGAP1-201ENST00000293748 CUL4AQ13619 759 aa12.92□□□□□ -0.34
SYNGAP1-201ENST00000293748 PPP1R21Q6ZMI0 780 aa12.92□□□□□ -0.34
SYNGAP1-201ENST00000293748 PROCA1Q8NCQ7 364 aaPredicted RBP12.92□□□□□ -0.34
SYNGAP1-201ENST00000293748 CACTINQ8WUQ7 758 aaKnown RBP12.92□□□□□ -0.34
SYNGAP1-201ENST00000293748 CLMNQ96JQ2 1002 aa12.92□□□□□ -0.34
SYNGAP1-201ENST00000293748 FAN1Q9Y2M0 1017 aa12.92□□□□□ -0.34
SYNGAP1-201ENST00000293748 TRPA1O75762 1119 aa12.92□□□□□ -0.34
SYNGAP1-201ENST00000293748 STAT1P42224 750 aa12.92□□□□□ -0.34
SYNGAP1-201ENST00000293748 NCBP1Q09161 790 aaKnown RBP12.92□□□□□ -0.34
SYNGAP1-201ENST00000293748 SLFNL1Q499Z3 407 aa12.92□□□□□ -0.34
SYNGAP1-201ENST00000293748 LRCH2Q5VUJ6 765 aa12.92□□□□□ -0.34
SYNGAP1-201ENST00000293748 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms