RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 IPO7O95373 1038 aaKnown RBP17.56■□□□□ 0.4
MAP1LC3B-201ENST00000268607 LONP1P36776 959 aaKnown RBP17.56■□□□□ 0.4
MAP1LC3B-201ENST00000268607 UBA7P41226 1012 aa17.56■□□□□ 0.4
MAP1LC3B-201ENST00000268607 GUCY1A3Q02108 690 aa17.56■□□□□ 0.4
MAP1LC3B-201ENST00000268607 SEPT2Q15019 361 aa17.56■□□□□ 0.4
MAP1LC3B-201ENST00000268607 NAALADL2Q58DX5 795 aa17.56■□□□□ 0.4
MAP1LC3B-201ENST00000268607 ZNF658Q5TYW1 1059 aaPredicted RBP17.56■□□□□ 0.4
MAP1LC3B-201ENST00000268607 SPATA4Q8NEY3 305 aa17.56■□□□□ 0.4
MAP1LC3B-201ENST00000268607 LRRC15Q8TF66 581 aa17.56■□□□□ 0.4
MAP1LC3B-201ENST00000268607 ZIM3Q96PE6 472 aa17.56■□□□□ 0.4
MAP1LC3B-201ENST00000268607 ZMYND12Q9H0C1 365 aa17.56■□□□□ 0.4
MAP1LC3B-201ENST00000268607 EHD2Q9NZN4 543 aa17.56■□□□□ 0.4
MAP1LC3B-201ENST00000268607 HDAC9Q9UKV0 1011 aa17.56■□□□□ 0.4
MAP1LC3B-201ENST00000268607 ZNF646O15015 1829 aaPredicted RBP17.56■□□□□ 0.4
MAP1LC3B-201ENST00000268607 LGALS16A8MUM7 142 aa17.56■□□□□ 0.4
MAP1LC3B-201ENST00000268607 CXCR5P32302 372 aa17.56■□□□□ 0.4
MAP1LC3B-201ENST00000268607 SLC16A2P36021 539 aa17.56■□□□□ 0.4
MAP1LC3B-201ENST00000268607 KLK7P49862 253 aa17.56■□□□□ 0.4
MAP1LC3B-201ENST00000268607 PMS1P54277 932 aaKnown RBP17.56■□□□□ 0.4
MAP1LC3B-201ENST00000268607 EPHB4P54760 987 aa17.56■□□□□ 0.4
MAP1LC3B-201ENST00000268607 NNTQ13423 1086 aa17.56■□□□□ 0.4
MAP1LC3B-201ENST00000268607 TTBK2Q6IQ55 1244 aa17.56■□□□□ 0.4
MAP1LC3B-201ENST00000268607 ZNF662Q6ZS27 426 aa17.56■□□□□ 0.4
MAP1LC3B-201ENST00000268607 RNPC3Q96LT9 517 aaKnown RBP17.56■□□□□ 0.4
MAP1LC3B-201ENST00000268607 TRIM6Q9C030 488 aaPredicted RBP17.56■□□□□ 0.4
MAP1LC3B-201ENST00000268607 DDX20Q9UHI6 824 aaKnown RBP17.56■□□□□ 0.4
MAP1LC3B-201ENST00000268607 CNOT7Q9UIV1 285 aaKnown RBP17.56■□□□□ 0.4
MAP1LC3B-201ENST00000268607 SNX12Q9UMY4 172 aa17.56■□□□□ 0.4
MAP1LC3B-201ENST00000268607 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.56■□□□□ 0.4
MAP1LC3B-201ENST00000268607 BRCA1P38398 1863 aaKnown RBP17.56■□□□□ 0.4
MAP1LC3B-201ENST00000268607 ATXN2Q99700 1313 aaKnown RBP17.56■□□□□ 0.4
MAP1LC3B-201ENST00000268607 SMTNP53814 917 aa17.55■□□□□ 0.4
MAP1LC3B-201ENST00000268607 MEA1Q16626 185 aa17.55■□□□□ 0.4
MAP1LC3B-201ENST00000268607 CCDC13Q8IYE1 715 aa17.55■□□□□ 0.4
MAP1LC3B-201ENST00000268607 ZNF507Q8TCN5 953 aa17.55■□□□□ 0.4
MAP1LC3B-201ENST00000268607 EEF2KMTQ96G04 330 aa17.55■□□□□ 0.4
MAP1LC3B-201ENST00000268607 LZTS2Q9BRK4 669 aa17.55■□□□□ 0.4
MAP1LC3B-201ENST00000268607 IDI2Q9BXS1 227 aa17.55■□□□□ 0.4
MAP1LC3B-201ENST00000268607 DISC1Q9NRI5 854 aa17.55■□□□□ 0.4
MAP1LC3B-201ENST00000268607 PI4KBQ9UBF8 816 aa17.55■□□□□ 0.4
MAP1LC3B-201ENST00000268607 LRWD1Q9UFC0 647 aa17.55■□□□□ 0.4
MAP1LC3B-201ENST00000268607 RASSF9O75901 435 aa17.55■□□□□ 0.4
MAP1LC3B-201ENST00000268607 APBA1Q02410 837 aa17.55■□□□□ 0.4
MAP1LC3B-201ENST00000268607 KIF5AQ12840 1032 aa17.55■□□□□ 0.4
MAP1LC3B-201ENST00000268607 CERKLQ49MI3 558 aaPredicted RBP17.55■□□□□ 0.4
MAP1LC3B-201ENST00000268607 NAA35Q5VZE5 725 aa17.55■□□□□ 0.4
MAP1LC3B-201ENST00000268607 ALS2CLQ60I27 953 aa17.55■□□□□ 0.4
MAP1LC3B-201ENST00000268607 KCTD1Q719H9 257 aa17.55■□□□□ 0.4
MAP1LC3B-201ENST00000268607 KRT26Q7Z3Y9 468 aa17.55■□□□□ 0.4
MAP1LC3B-201ENST00000268607 SPICE1Q8N0Z3 855 aa17.55■□□□□ 0.4
MAP1LC3B-201ENST00000268607 TBCKQ8TEA7 893 aa17.55■□□□□ 0.4
MAP1LC3B-201ENST00000268607 PURBQ96QR8 312 aaKnown RBP17.55■□□□□ 0.4
MAP1LC3B-201ENST00000268607 UIMC1Q96RL1 719 aa17.55■□□□□ 0.4
MAP1LC3B-201ENST00000268607 CAPN6Q9Y6Q1 641 aa17.55■□□□□ 0.4
MAP1LC3B-201ENST00000268607 B4DLN1 442 aa17.55■□□□□ 0.4
MAP1LC3B-201ENST00000268607 H7C1D1 291 aa17.55■□□□□ 0.4
MAP1LC3B-201ENST00000268607 GTPBP6O43824 516 aaPredicted RBP17.55■□□□□ 0.4
MAP1LC3B-201ENST00000268607 RPN1P04843 607 aaKnown RBP17.55■□□□□ 0.4
MAP1LC3B-201ENST00000268607 TRIM21P19474 475 aaKnown RBP17.55■□□□□ 0.4
MAP1LC3B-201ENST00000268607 LSP1P33241 339 aa17.55■□□□□ 0.4
MAP1LC3B-201ENST00000268607 TECP42680 631 aa17.55■□□□□ 0.4
MAP1LC3B-201ENST00000268607 MRPL12P52815 198 aaKnown RBP17.55■□□□□ 0.4
MAP1LC3B-201ENST00000268607 NAP1L1P55209 391 aaKnown RBP17.55■□□□□ 0.4
MAP1LC3B-201ENST00000268607 FKBP1AP62942 108 aaKnown RBP17.55■□□□□ 0.4
MAP1LC3B-201ENST00000268607 CRYMQ14894 314 aa17.55■□□□□ 0.4
MAP1LC3B-201ENST00000268607 ZYXQ15942 572 aaKnown RBP17.55■□□□□ 0.4
MAP1LC3B-201ENST00000268607 C11orf91Q3C1V1 193 aa17.55■□□□□ 0.4
MAP1LC3B-201ENST00000268607 VCPKMTQ9H867 229 aa17.55■□□□□ 0.4
MAP1LC3B-201ENST00000268607 C6orf50Q9HD87 102 aa17.55■□□□□ 0.4
MAP1LC3B-201ENST00000268607 FER1L6Q2WGJ9 1857 aa17.54■□□□□ 0.4
MAP1LC3B-201ENST00000268607 A0A1W2PQC6 194 aa17.54■□□□□ 0.4
MAP1LC3B-201ENST00000268607 GH2P01242 217 aa17.54■□□□□ 0.4
MAP1LC3B-201ENST00000268607 SSBP05455 408 aaKnown RBP eCLIP17.54■□□□□ 0.4
MAP1LC3B-201ENST00000268607 CLNS1AP54105 237 aaKnown RBP17.54■□□□□ 0.4
MAP1LC3B-201ENST00000268607 SNAP25P60880 206 aa17.54■□□□□ 0.4
MAP1LC3B-201ENST00000268607 HDLBPQ00341 1268 aaKnown RBP17.54■□□□□ 0.4
MAP1LC3B-201ENST00000268607 NONOQ15233 471 aaKnown RBP eCLIP17.54■□□□□ 0.4
MAP1LC3B-201ENST00000268607 DAGLBQ8NCG7 672 aa17.54■□□□□ 0.4
MAP1LC3B-201ENST00000268607 ZNHIT6Q9NWK9 470 aaKnown RBP17.54■□□□□ 0.4
MAP1LC3B-201ENST00000268607 SKAP2O75563 359 aaPredicted RBP17.54■□□□□ 0.4
MAP1LC3B-201ENST00000268607 DDNO94850 711 aaPredicted RBP17.54■□□□□ 0.4
MAP1LC3B-201ENST00000268607 SEC24CP53992 1094 aa17.54■□□□□ 0.4
MAP1LC3B-201ENST00000268607 CCDC96Q2M329 555 aa17.54■□□□□ 0.4
MAP1LC3B-201ENST00000268607 HAUS3Q68CZ6 603 aa17.54■□□□□ 0.4
MAP1LC3B-201ENST00000268607 NFRKBQ6P4R8 1299 aa17.54■□□□□ 0.4
MAP1LC3B-201ENST00000268607 EMBQ6PCB8 327 aa17.54■□□□□ 0.4
MAP1LC3B-201ENST00000268607 FMNL3Q8IVF7 1028 aa17.54■□□□□ 0.4
MAP1LC3B-201ENST00000268607 MLXIPQ9HAP2 919 aa17.54■□□□□ 0.4
MAP1LC3B-201ENST00000268607 SLC40A1Q9NP59 571 aa17.54■□□□□ 0.4
MAP1LC3B-201ENST00000268607 STIM2Q9P246 746 aa17.54■□□□□ 0.4
MAP1LC3B-201ENST00000268607 IRF6O14896 467 aa17.53■□□□□ 0.4
MAP1LC3B-201ENST00000268607 ZNF263O14978 683 aa17.53■□□□□ 0.4
MAP1LC3B-201ENST00000268607 TAL1P17542 331 aaPredicted RBP17.53■□□□□ 0.4
MAP1LC3B-201ENST00000268607 ERCC3P19447 782 aa17.53■□□□□ 0.4
MAP1LC3B-201ENST00000268607 CALRP27797 417 aaKnown RBP17.53■□□□□ 0.4
MAP1LC3B-201ENST00000268607 CDR1P51861 262 aa17.53■□□□□ 0.4
MAP1LC3B-201ENST00000268607 INHBEP58166 350 aa17.53■□□□□ 0.4
MAP1LC3B-201ENST00000268607 EPN3Q9H201 632 aa17.53■□□□□ 0.4
MAP1LC3B-201ENST00000268607 TMOD2Q9NZR1 351 aa17.53■□□□□ 0.4
MAP1LC3B-201ENST00000268607 CNTNAP1P78357 1384 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms