RNA–Protein interactions for RNA: YLR403W

SFP1, Transcript of Regulates transcription of ribosomal protein and biogenesis genes, yeastyeast

Gene SFP1, Length 2,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFP1YLR403W YBR085C-AO43137 85 aa8.76□□□□□ -1.01
SFP1YLR403W PRC1P00729 532 aa8.76□□□□□ -1.01
SFP1YLR403W RAD7P06779 565 aa8.76□□□□□ -1.01
SFP1YLR403W COS2P0CX12 379 aa8.76□□□□□ -1.01
SFP1YLR403W COS3P0CX13 379 aa8.76□□□□□ -1.01
SFP1YLR403W CHA1P25379 360 aaKnown RBP8.76□□□□□ -1.01
SFP1YLR403W CDC50P25656 391 aa8.76□□□□□ -1.01
SFP1YLR403W PRO3P32263 286 aaKnown RBP8.76□□□□□ -1.01
SFP1YLR403W ICP55P40051 511 aa8.76□□□□□ -1.01
SFP1YLR403W HOC1P47124 396 aa8.76□□□□□ -1.01
SFP1YLR403W IBA57P47158 497 aa8.76□□□□□ -1.01
SFP1YLR403W EFM3P47163 339 aa8.76□□□□□ -1.01
SFP1YLR403W SSU72P53538 206 aaPredicted RBP8.76□□□□□ -1.01
SFP1YLR403W SPC98P53540 846 aa8.76□□□□□ -1.01
SFP1YLR403W NAN1Q02931 896 aaKnown RBP8.76□□□□□ -1.01
SFP1YLR403W YDR109CQ04585 715 aa8.76□□□□□ -1.01
SFP1YLR403W SCP1Q08873 200 aa8.76□□□□□ -1.01
SFP1YLR403W AFI1Q99222 893 aa8.76□□□□□ -1.01
SFP1YLR403W TPK2P06245 380 aa8.76□□□□□ -1.01
SFP1YLR403W DFR1P07807 211 aaKnown RBP RIP-Chip data8.76□□□□□ -1.01not detected
SFP1YLR403W PEP5P12868 1029 aa8.76□□□□□ -1.01
SFP1YLR403W MET16P18408 261 aaPredicted RBP8.76□□□□□ -1.01
SFP1YLR403W CDC20P26309 610 aa8.76□□□□□ -1.01
SFP1YLR403W IDH1P28834 360 aaKnown RBP RIP-Chip data8.76□□□□□ -1.01not detected
SFP1YLR403W SNU114P36048 1008 aaKnown RBP8.76□□□□□ -1.01
SFP1YLR403W MRPL15P36523 253 aa8.76□□□□□ -1.01
SFP1YLR403W ECM21P38167 1117 aaKnown RBP8.76□□□□□ -1.01
SFP1YLR403W ECM2P38241 364 aaKnown RBP8.76□□□□□ -1.01
SFP1YLR403W PRE3P38624 215 aa8.76□□□□□ -1.01
SFP1YLR403W ACO2P39533 789 aa8.76□□□□□ -1.01
SFP1YLR403W PMT4P46971 762 aa8.76□□□□□ -1.01
SFP1YLR403W NET1P47035 1189 aa8.76□□□□□ -1.01
SFP1YLR403W RIM8P53179 542 aa8.76□□□□□ -1.01
SFP1YLR403W ARE2P53629 642 aaKnown RBP8.76□□□□□ -1.01
SFP1YLR403W YNL010WP53981 241 aaKnown RBP8.76□□□□□ -1.01
SFP1YLR403W YMR099CQ03161 297 aaKnown RBP8.76□□□□□ -1.01
SFP1YLR403W CAC2Q04199 468 aa8.76□□□□□ -1.01
SFP1YLR403W APC4Q04601 652 aa8.76□□□□□ -1.01
SFP1YLR403W THI7Q05998 598 aa8.76□□□□□ -1.01
SFP1YLR403W HIM1Q06674 414 aa8.76□□□□□ -1.01
SFP1YLR403W ACM1Q08981 209 aa8.76□□□□□ -1.01
SFP1YLR403W YOP1Q12402 180 aa8.76□□□□□ -1.01
SFP1YLR403W WIP1Q2V2P8 89 aa8.76□□□□□ -1.01
SFP1YLR403W CIT1P00890 479 aa8.75□□□□□ -1.01
SFP1YLR403W TY1A-LR4P0C2I8 440 aaKnown RBP8.75□□□□□ -1.01
SFP1YLR403W TY1A-DR6P0CX70 440 aa8.75□□□□□ -1.01
SFP1YLR403W TY1A-ER1P0CX71 440 aa8.75□□□□□ -1.01
SFP1YLR403W TY1A-LR2P0CX72 440 aa8.75□□□□□ -1.01
SFP1YLR403W TY1A-PLP0CX73 440 aa8.75□□□□□ -1.01
SFP1YLR403W TY1A-JR1P0CX74 440 aa8.75□□□□□ -1.01
SFP1YLR403W TY1A-LR3P0CX75 440 aa8.75□□□□□ -1.01
SFP1YLR403W TY1A-ML2P0CX76 440 aa8.75□□□□□ -1.01
SFP1YLR403W MRPL9P31334 269 aa8.75□□□□□ -1.01
SFP1YLR403W YBR056WP38081 501 aa8.75□□□□□ -1.01
SFP1YLR403W MIT1P40002 666 aa8.75□□□□□ -1.01
SFP1YLR403W TGL3P40308 642 aa8.75□□□□□ -1.01
SFP1YLR403W NOP19P53317 196 aaPredicted RBP8.75□□□□□ -1.01
SFP1YLR403W SLD5Q03406 294 aa8.75□□□□□ -1.01
SFP1YLR403W NBA1Q08229 501 aaKnown RBP8.75□□□□□ -1.01
SFP1YLR403W TY1A-GR1Q12085 440 aa8.75□□□□□ -1.01
SFP1YLR403W TY1A-PR3Q6Q5H1 440 aaKnown RBP8.75□□□□□ -1.01
SFP1YLR403W TY1A-OLQ92392 440 aaKnown RBP8.75□□□□□ -1.01
SFP1YLR403W RGS2Q99188 309 aa8.75□□□□□ -1.01
SFP1YLR403W TY4B-HP0C2J7 1802 aa8.75□□□□□ -1.01
SFP1YLR403W TY4B-JP47024 1803 aa8.75□□□□□ -1.01
SFP1YLR403W HEM15P16622 393 aa8.74□□□□□ -1.01
SFP1YLR403W FRE1P32791 686 aa8.74□□□□□ -1.01
SFP1YLR403W NCL1P38205 684 aaKnown RBP8.74□□□□□ -1.01
SFP1YLR403W NTC20P38302 140 aaPredicted RBP8.74□□□□□ -1.01
SFP1YLR403W YHK8P38776 514 aa8.74□□□□□ -1.01
SFP1YLR403W MRX5P47007 382 aa8.74□□□□□ -1.01
SFP1YLR403W PUS4P48567 403 aaKnown RBP8.74□□□□□ -1.01
SFP1YLR403W TEP1P53916 434 aa8.74□□□□□ -1.01
SFP1YLR403W EOS1P53938 366 aa8.74□□□□□ -1.01
SFP1YLR403W EFR3Q03653 782 aaKnown RBP8.74□□□□□ -1.01
SFP1YLR403W NHX1Q04121 633 aa8.74□□□□□ -1.01
SFP1YLR403W SMA2Q04658 369 aa8.74□□□□□ -1.01
SFP1YLR403W YOR365CQ08844 703 aa8.74□□□□□ -1.01
SFP1YLR403W SAM4Q08985 325 aaKnown RBP8.74□□□□□ -1.01
SFP1YLR403W AHC2P25649 128 aa8.74□□□□□ -1.01
SFP1YLR403W GPI10P30777 616 aa8.74□□□□□ -1.01
SFP1YLR403W MCM10P32354 571 aa8.74□□□□□ -1.01
SFP1YLR403W TCM62P38228 572 aaKnown RBP8.74□□□□□ -1.01
SFP1YLR403W PRK1P40494 810 aa8.74□□□□□ -1.01
SFP1YLR403W ARH1P48360 493 aa8.74□□□□□ -1.01
SFP1YLR403W SOK2P53438 785 aaPredicted RBP8.74□□□□□ -1.01
SFP1YLR403W YPL080CQ02826 108 aa8.74□□□□□ -1.01
SFP1YLR403W MDM30Q05930 598 aa8.74□□□□□ -1.01
SFP1YLR403W SFM1Q12314 213 aa8.74□□□□□ -1.01
SFP1YLR403W TRP4P07285 380 aaPredicted RBP8.73□□□□□ -1.01
SFP1YLR403W AGP1P25376 633 aa8.73□□□□□ -1.01
SFP1YLR403W MCM5P29496 775 aaKnown RBP8.73□□□□□ -1.01
SFP1YLR403W IMP2'P32351 346 aa8.73□□□□□ -1.01
SFP1YLR403W APE2P32454 952 aaKnown RBP8.73□□□□□ -1.01
SFP1YLR403W SRO77P38163 1010 aa8.73□□□□□ -1.01
SFP1YLR403W URA8P38627 578 aaPredicted RBP8.73□□□□□ -1.01
SFP1YLR403W PEX28P38848 579 aa8.73□□□□□ -1.01
SFP1YLR403W GIP4P39732 760 aa8.73□□□□□ -1.01
SFP1YLR403W MET28P40573 187 aa8.73□□□□□ -1.01
SFP1YLR403W YJR107WP47145 328 aa8.73□□□□□ -1.01
Retrieved 100 of 5,963 RNA–protein pairs in 40.4 ms