RNA–Protein interactions for RNA: YGL213C

SKI8, Transcript of Ski complex component and WD-repeat protein, yeast

Gene SKI8, Length 1,194 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKI8	YGL213C	MLH2	Q07980	695 aa		4.79	□□□□□ -1.64
SKI8	YGL213C	DSE3	Q08729	430 aa		4.79	□□□□□ -1.64
SKI8	YGL213C	NBL1	Q3E7Y6	73 aa		4.79	□□□□□ -1.64
SKI8	YGL213C	SRN2	Q99176	213 aa		4.79	□□□□□ -1.64
SKI8	YGL213C	RAD57	P25301	460 aa		4.78	□□□□□ -1.64
SKI8	YGL213C	YCR100C	P25606	316 aa		4.78	□□□□□ -1.64
SKI8	YGL213C	FAA1	P30624	700 aa	Known RBP	4.78	□□□□□ -1.64
SKI8	YGL213C	NRP1	P32770	719 aa	Known RBP RIP-Chip data	4.78	□□□□□ -1.64	not detected
SKI8	YGL213C	RIM2	P38127	377 aa		4.78	□□□□□ -1.64
SKI8	YGL213C	KAP104	P38217	918 aa	Known RBP	4.78	□□□□□ -1.64
SKI8	YGL213C	GPI16	P38875	610 aa		4.78	□□□□□ -1.64
SKI8	YGL213C	NAS2	P40555	220 aa		4.78	□□□□□ -1.64
SKI8	YGL213C	PDR16	P53860	351 aa	Known RBP	4.78	□□□□□ -1.64
SKI8	YGL213C	SPH1	Q06160	661 aa		4.78	□□□□□ -1.64
SKI8	YGL213C	YPT1	P01123	206 aa	Known RBP	4.77	□□□□□ -1.65
SKI8	YGL213C	NFT1	P0CE68	1218 aa		4.77	□□□□□ -1.65
SKI8	YGL213C	GLN3	P18494	730 aa		4.77	□□□□□ -1.65
SKI8	YGL213C	UBA1	P22515	1024 aa	Known RBP	4.77	□□□□□ -1.65
SKI8	YGL213C	NIP1	P32497	812 aa	Known RBP	4.77	□□□□□ -1.65
SKI8	YGL213C	SIP2	P34164	415 aa	Known RBP	4.77	□□□□□ -1.65
SKI8	YGL213C	INM1	P38710	295 aa		4.77	□□□□□ -1.65
SKI8	YGL213C	LYS1	P38998	373 aa	RIP-Chip data	4.77	□□□□□ -1.65	not detected
SKI8	YGL213C	PES4	P39684	611 aa		4.77	□□□□□ -1.65
SKI8	YGL213C	YER079W	P40052	210 aa	Known RBP	4.77	□□□□□ -1.65
SKI8	YGL213C	DIG1	Q03063	452 aa	Known RBP	4.77	□□□□□ -1.65
SKI8	YGL213C	YMR034C	Q05131	434 aa	Predicted RBP	4.77	□□□□□ -1.65
SKI8	YGL213C	NSE1	Q07913	336 aa		4.77	□□□□□ -1.65
SKI8	YGL213C	YFL068W	P0CX99	160 aa		4.76	□□□□□ -1.65
SKI8	YGL213C	YLL066W-A	P0CY00	160 aa		4.76	□□□□□ -1.65
SKI8	YGL213C	YLL067W-A	P0CY01	160 aa		4.76	□□□□□ -1.65
SKI8	YGL213C	TAL1	P15019	335 aa	Known RBP	4.76	□□□□□ -1.65
SKI8	YGL213C	NDI1	P32340	513 aa		4.76	□□□□□ -1.65
SKI8	YGL213C	ASK1	P35734	292 aa		4.76	□□□□□ -1.65
SKI8	YGL213C	QDR3	P38227	689 aa		4.76	□□□□□ -1.65
SKI8	YGL213C	YAL037W	P39728	267 aa		4.76	□□□□□ -1.65
SKI8	YGL213C	YPS6	P40583	537 aa		4.76	□□□□□ -1.65
SKI8	YGL213C	RPA34	P47006	233 aa	Predicted RBP	4.76	□□□□□ -1.65
SKI8	YGL213C	GWT1	P47026	490 aa		4.76	□□□□□ -1.65
SKI8	YGL213C	IKS1	P47042	667 aa		4.76	□□□□□ -1.65
SKI8	YGL213C	SCW4	P53334	386 aa	Known RBP	4.76	□□□□□ -1.65
SKI8	YGL213C	YNL143C	P53908	130 aa		4.76	□□□□□ -1.65
SKI8	YGL213C	DST1	P07273	309 aa		4.75	□□□□□ -1.65
SKI8	YGL213C	SCH9	P11792	824 aa	Known RBP	4.75	□□□□□ -1.65
SKI8	YGL213C	CTR86	P25355	563 aa		4.75	□□□□□ -1.65
SKI8	YGL213C	YSC83	P32792	385 aa		4.75	□□□□□ -1.65
SKI8	YGL213C	PAC11	P40960	533 aa		4.75	□□□□□ -1.65
SKI8	YGL213C	GPI8	P49018	411 aa		4.75	□□□□□ -1.65
SKI8	YGL213C	PHB2	P50085	310 aa		4.75	□□□□□ -1.65
SKI8	YGL213C	SHE4	P51534	789 aa		4.75	□□□□□ -1.65
SKI8	YGL213C	FRE4	P53746	719 aa		4.75	□□□□□ -1.65
SKI8	YGL213C	GPI15	P53961	229 aa		4.75	□□□□□ -1.65
SKI8	YGL213C	YLR281C	Q05863	155 aa		4.75	□□□□□ -1.65
SKI8	YGL213C	IPK1	Q06667	281 aa		4.75	□□□□□ -1.65
SKI8	YGL213C	SGT1	Q08446	395 aa		4.75	□□□□□ -1.65
SKI8	YGL213C	MUM3	Q08750	479 aa		4.75	□□□□□ -1.65
SKI8	YGL213C	ARG4	P04076	463 aa	Predicted RBP	4.74	□□□□□ -1.65
SKI8	YGL213C	ILV5	P06168	395 aa	Known RBP	4.74	□□□□□ -1.65
SKI8	YGL213C	CHS1	P08004	1131 aa		4.74	□□□□□ -1.65
SKI8	YGL213C	IMA3	P0CW40	589 aa		4.74	□□□□□ -1.65
SKI8	YGL213C	IMA4	P0CW41	589 aa		4.74	□□□□□ -1.65
SKI8	YGL213C	PTR2	P32901	601 aa		4.74	□□□□□ -1.65
SKI8	YGL213C	YBR056W	P38081	501 aa		4.74	□□□□□ -1.65
SKI8	YGL213C	YBL028C	P38202	106 aa		4.74	□□□□□ -1.65
SKI8	YGL213C	DIM1	P41819	318 aa	Known RBP	4.74	□□□□□ -1.65
SKI8	YGL213C	YNR068C	P53754	272 aa		4.74	□□□□□ -1.65
SKI8	YGL213C	PRM1	P53835	661 aa		4.74	□□□□□ -1.65
SKI8	YGL213C	ODC1	Q03028	310 aa		4.74	□□□□□ -1.65
SKI8	YGL213C	BET5	Q03630	159 aa		4.74	□□□□□ -1.65
SKI8	YGL213C	FMP42	Q04991	504 aa		4.74	□□□□□ -1.65
SKI8	YGL213C	SNA4	Q07549	140 aa		4.74	□□□□□ -1.65
SKI8	YGL213C	IMA2	Q08295	589 aa		4.74	□□□□□ -1.65
SKI8	YGL213C	ATG34	Q12292	412 aa		4.74	□□□□□ -1.65
SKI8	YGL213C	CRM1	P30822	1084 aa	Known RBP	4.73	□□□□□ -1.65
SKI8	YGL213C	ATO2	P32907	282 aa		4.73	□□□□□ -1.65
SKI8	YGL213C	ARC40	P38328	384 aa	Known RBP	4.73	□□□□□ -1.65
SKI8	YGL213C	RTT107	P38850	1070 aa		4.73	□□□□□ -1.65
SKI8	YGL213C	SHO1	P40073	367 aa		4.73	□□□□□ -1.65
SKI8	YGL213C	YIL169C	P40442	995 aa		4.73	□□□□□ -1.65
SKI8	YGL213C	YIL152W	P40455	235 aa		4.73	□□□□□ -1.65
SKI8	YGL213C	MMT1	Q03218	510 aa		4.73	□□□□□ -1.65
SKI8	YGL213C	RSN1	Q03516	953 aa		4.73	□□□□□ -1.65
SKI8	YGL213C	URH1	Q04179	340 aa		4.73	□□□□□ -1.65
SKI8	YGL213C	SKI7	Q08491	747 aa	Predicted RBP	4.73	□□□□□ -1.65
SKI8	YGL213C	YPR022C	Q12139	1133 aa		4.73	□□□□□ -1.65
SKI8	YGL213C	ORT1	Q12375	292 aa		4.73	□□□□□ -1.65
SKI8	YGL213C	STE3	P06783	470 aa		4.72	□□□□□ -1.65
SKI8	YGL213C	SLM5	P25345	492 aa	Known RBP	4.72	□□□□□ -1.65
SKI8	YGL213C	LSB5	P25369	354 aa		4.72	□□□□□ -1.65
SKI8	YGL213C	RDS1	P25611	832 aa		4.72	□□□□□ -1.65
SKI8	YGL213C	SPP381	P38282	291 aa	Predicted RBP	4.72	□□□□□ -1.65
SKI8	YGL213C	STP2	P38704	541 aa		4.72	□□□□□ -1.65
SKI8	YGL213C	POP6	P53218	158 aa		4.72	□□□□□ -1.65
SKI8	YGL213C	UTP6	Q02354	440 aa	Known RBP	4.72	□□□□□ -1.65
SKI8	YGL213C	STD1	Q02794	444 aa		4.72	□□□□□ -1.65
SKI8	YGL213C	MGR3	Q04472	501 aa		4.72	□□□□□ -1.65
SKI8	YGL213C	SNT309	Q06091	175 aa	Predicted RBP	4.72	□□□□□ -1.65
SKI8	YGL213C	NOP6	Q07623	225 aa	Known RBP	4.72	□□□□□ -1.65
SKI8	YGL213C	GEP3	Q08622	556 aa		4.72	□□□□□ -1.65
SKI8	YGL213C	RTC5	Q12108	567 aa	Known RBP	4.72	□□□□□ -1.65
SKI8	YGL213C	TAD3	Q9URQ3	322 aa		4.72	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 71.8 ms