RNA–Protein interactions for RNA: YER088C

DOT6, Transcript of Protein involved in rRNA and ribosome biogenesis, yeast

Gene DOT6, Length 2,013 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DOT6	YER088C	KRE2	P27809	442 aa		1.95	□□□□□ -2.1
DOT6	YER088C	FUN19	P28003	413 aa	Predicted RBP	1.95	□□□□□ -2.1
DOT6	YER088C	HXT3	P32466	567 aa	Known RBP	1.95	□□□□□ -2.1
DOT6	YER088C	NPL6	P32832	435 aa		1.95	□□□□□ -2.1
DOT6	YER088C	TUL1	P36096	758 aa		1.95	□□□□□ -2.1
DOT6	YER088C	AVT5	P38176	459 aa		1.95	□□□□□ -2.1
DOT6	YER088C	MSO1	P53604	210 aa	Known RBP	1.95	□□□□□ -2.1
DOT6	YER088C	MDM1	Q01846	1127 aa		1.95	□□□□□ -2.1
DOT6	YER088C	SCW10	Q04951	389 aa		1.95	□□□□□ -2.1
DOT6	YER088C	TSR2	Q06672	205 aa	Known RBP	1.95	□□□□□ -2.1
DOT6	YER088C	ALE1	Q08548	619 aa		1.95	□□□□□ -2.1
DOT6	YER088C	RIM20	Q12033	661 aa		1.95	□□□□□ -2.1
DOT6	YER088C	RTN2	Q12443	393 aa		1.95	□□□□□ -2.1
DOT6	YER088C	YER078W-A	Q3E7A2	54 aa		1.95	□□□□□ -2.1
DOT6	YER088C	YCL021W-A	Q96VH3	125 aa		1.95	□□□□□ -2.1
DOT6	YER088C	ISN1	Q99312	450 aa		1.95	□□□□□ -2.1
DOT6	YER088C	VPS13	Q07878	3144 aa		1.94	□□□□□ -2.1
DOT6	YER088C	FLO1	P32768	1537 aa		1.94	□□□□□ -2.1
DOT6	YER088C	CHS1	P08004	1131 aa		1.94	□□□□□ -2.1
DOT6	YER088C	SEC63	P14906	663 aa		1.94	□□□□□ -2.1
DOT6	YER088C	EXO70	P19658	623 aa		1.94	□□□□□ -2.1
DOT6	YER088C	FRE2	P36033	711 aa		1.94	□□□□□ -2.1
DOT6	YER088C	LSM5	P40089	93 aa	Known RBP	1.94	□□□□□ -2.1
DOT6	YER088C	ALG8	P40351	577 aa		1.94	□□□□□ -2.1
DOT6	YER088C	OCA1	P50946	238 aa	Predicted RBP	1.94	□□□□□ -2.1
DOT6	YER088C	HNT3	Q08702	217 aa		1.94	□□□□□ -2.1
DOT6	YER088C	YLL056C	Q12177	298 aa		1.94	□□□□□ -2.1
DOT6	YER088C	HIP1	P06775	603 aa		1.93	□□□□□ -2.1
DOT6	YER088C	YIM1	P28625	365 aa		1.93	□□□□□ -2.1
DOT6	YER088C	PRP21	P32524	280 aa	Predicted RBP	1.93	□□□□□ -2.1
DOT6	YER088C	RFC3	P38629	340 aa		1.93	□□□□□ -2.1
DOT6	YER088C	TFG2	P41896	400 aa	Predicted RBP	1.93	□□□□□ -2.1
DOT6	YER088C	URB2	P47108	1174 aa		1.93	□□□□□ -2.1
DOT6	YER088C	YGR149W	P48236	432 aa		1.93	□□□□□ -2.1
DOT6	YER088C	VPS72	Q03388	795 aa		1.93	□□□□□ -2.1
DOT6	YER088C	TY3A-G	Q12173	290 aa		1.93	□□□□□ -2.1
DOT6	YER088C	TY3A-I	Q99219	290 aa		1.93	□□□□□ -2.1
DOT6	YER088C	DUR1,2	P32528	1835 aa	Known RBP	1.93	□□□□□ -2.1
DOT6	YER088C	UBR2	Q07963	1872 aa		1.93	□□□□□ -2.1
DOT6	YER088C	RHO2	P06781	192 aa		1.93	□□□□□ -2.1
DOT6	YER088C	RIP1	P08067	215 aa		1.93	□□□□□ -2.1
DOT6	YER088C	FLO11	P08640	1367 aa		1.93	□□□□□ -2.1
DOT6	YER088C	YBR139W	P38109	508 aa		1.93	□□□□□ -2.1
DOT6	YER088C	SPG5	P42933	373 aa		1.93	□□□□□ -2.1
DOT6	YER088C	YJL132W	P47014	750 aa		1.93	□□□□□ -2.1
DOT6	YER088C	AVT4	P50944	713 aa		1.93	□□□□□ -2.1
DOT6	YER088C	WSC2	P53832	503 aa		1.93	□□□□□ -2.1
DOT6	YER088C	GIS2	P53849	153 aa	Known RBP RIP-Chip data	1.93	□□□□□ -2.1	not detected
DOT6	YER088C	PRP42	Q03776	544 aa	Known RBP	1.93	□□□□□ -2.1
DOT6	YER088C	SOV1	Q04748	898 aa		1.93	□□□□□ -2.1
DOT6	YER088C	TUS1	Q06412	1307 aa		1.93	□□□□□ -2.1
DOT6	YER088C	SCM3	Q12334	223 aa		1.93	□□□□□ -2.1
DOT6	YER088C	TOR2	P32600	2474 aa	Known RBP	1.92	□□□□□ -2.1
DOT6	YER088C	LEU4	P06208	619 aa	Known RBP	1.92	□□□□□ -2.1
DOT6	YER088C	RED1	P14291	827 aa		1.92	□□□□□ -2.1
DOT6	YER088C	RAD14	P28519	371 aa		1.92	□□□□□ -2.1
DOT6	YER088C	AFG1	P32317	509 aa		1.92	□□□□□ -2.1
DOT6	YER088C	NDI1	P32340	513 aa		1.92	□□□□□ -2.1
DOT6	YER088C	GLC7	P32598	312 aa	Known RBP	1.92	□□□□□ -2.1
DOT6	YER088C	GYP6	P32806	458 aa		1.92	□□□□□ -2.1
DOT6	YER088C	NFU1	P32860	256 aa		1.92	□□□□□ -2.1
DOT6	YER088C	NIP100	P33420	868 aa		1.92	□□□□□ -2.1
DOT6	YER088C	YOX1	P34161	385 aa		1.92	□□□□□ -2.1
DOT6	YER088C	SAS3	P34218	831 aa		1.92	□□□□□ -2.1
DOT6	YER088C	RFS1	P38234	210 aa	Known RBP	1.92	□□□□□ -2.1
DOT6	YER088C	POP1	P41812	875 aa		1.92	□□□□□ -2.1
DOT6	YER088C	ELP2	P42935	788 aa		1.92	□□□□□ -2.1
DOT6	YER088C	VTC2	P43585	828 aa		1.92	□□□□□ -2.1
DOT6	YER088C	ODC1	Q03028	310 aa		1.92	□□□□□ -2.1
DOT6	YER088C	PIR3	Q03180	325 aa		1.92	□□□□□ -2.1
DOT6	YER088C	ARX1	Q03862	593 aa	Known RBP	1.92	□□□□□ -2.1
DOT6	YER088C	YDR034W-B	Q6Q5X2	51 aa		1.92	□□□□□ -2.1
DOT6	YER088C	SAC3	P46674	1301 aa		1.91	□□□□□ -2.1
DOT6	YER088C	CBS2	P14905	389 aa		1.91	□□□□□ -2.1
DOT6	YER088C	IDH2	P28241	369 aa	Known RBP	1.91	□□□□□ -2.1
DOT6	YER088C	ITR1	P30605	584 aa		1.91	□□□□□ -2.1
DOT6	YER088C	RML2	P32611	393 aa		1.91	□□□□□ -2.1
DOT6	YER088C	YHR131C	P38835	850 aa		1.91	□□□□□ -2.1
DOT6	YER088C	SPL2	P38839	148 aa		1.91	□□□□□ -2.1
DOT6	YER088C	ISC1	P40015	477 aa	Known RBP	1.91	□□□□□ -2.1
DOT6	YER088C	YPI1	P43587	155 aa		1.91	□□□□□ -2.1
DOT6	YER088C	SRB7	P47822	140 aa		1.91	□□□□□ -2.1
DOT6	YER088C	OGG1	P53397	376 aa	Predicted RBP	1.91	□□□□□ -2.1
DOT6	YER088C	MDM30	Q05930	598 aa		1.91	□□□□□ -2.1
DOT6	YER088C	ECM29	P38737	1868 aa		1.91	□□□□□ -2.1
DOT6	YER088C	PPH22	P23595	377 aa		1.91	□□□□□ -2.1
DOT6	YER088C	YCR100C	P25606	316 aa		1.91	□□□□□ -2.1
DOT6	YER088C	OTU2	P38747	307 aa	Known RBP	1.91	□□□□□ -2.1
DOT6	YER088C	DLD2	P46681	530 aa	Known RBP	1.91	□□□□□ -2.1
DOT6	YER088C	YNL050C	P53952	270 aa		1.91	□□□□□ -2.1
DOT6	YER088C	YLR287C	Q05881	355 aa		1.91	□□□□□ -2.1
DOT6	YER088C	VTA1	Q06263	330 aa		1.91	□□□□□ -2.1
DOT6	YER088C	RSA1	Q08932	381 aa		1.91	□□□□□ -2.1
DOT6	YER088C	ERV2	Q12284	196 aa		1.91	□□□□□ -2.1
DOT6	YER088C	AHC1	Q12433	566 aa		1.91	□□□□□ -2.1
DOT6	YER088C	FAB1	P34756	2278 aa		1.9	□□□□□ -2.1
DOT6	YER088C	GPH1	P06738	902 aa	Known RBP	1.9	□□□□□ -2.11
DOT6	YER088C	SPS4	P09937	338 aa		1.9	□□□□□ -2.11
DOT6	YER088C	HEM15	P16622	393 aa		1.9	□□□□□ -2.11
DOT6	YER088C	CDC60	P26637	1090 aa	Known RBP	1.9	□□□□□ -2.11

Retrieved 100 of 5,963 RNA–protein pairs in 59.5 ms