RNA–Protein interactions for RNA: YDL212W

SHR3, Transcript of Endoplasmic reticulum packaging chaperone, yeastyeast

Gene SHR3, Length 633 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHR3YDL212W YJR011CP47086 261 aaPredicted RBP3.64□□□□□ -1.83
SHR3YDL212W HER2Q03557 464 aa3.64□□□□□ -1.83
SHR3YDL212W COG4Q06096 861 aa3.64□□□□□ -1.83
SHR3YDL212W TSR2Q06672 205 aaKnown RBP3.64□□□□□ -1.83
SHR3YDL212W FDH1Q08911 376 aa3.64□□□□□ -1.83
SHR3YDL212W ISN1Q99312 450 aa3.64□□□□□ -1.83
SHR3YDL212W DAL2P25335 343 aa3.63□□□□□ -1.83
SHR3YDL212W RVS161P25343 265 aaKnown RBP3.63□□□□□ -1.83
SHR3YDL212W LSB5P25369 354 aa3.63□□□□□ -1.83
SHR3YDL212W ARA1P38115 344 aa3.63□□□□□ -1.83
SHR3YDL212W RPS0BP46654 252 aaKnown RBP3.63□□□□□ -1.83
SHR3YDL212W HMS2P47175 358 aa3.63□□□□□ -1.83
SHR3YDL212W SGT1Q08446 395 aa3.63□□□□□ -1.83
SHR3YDL212W VAM3Q12241 283 aa3.63□□□□□ -1.83
SHR3YDL212W ARG4P04076 463 aaPredicted RBP3.62□□□□□ -1.83
SHR3YDL212W CDC31P06704 161 aaKnown RBP3.62□□□□□ -1.83
SHR3YDL212W RAD57P25301 460 aa3.62□□□□□ -1.83
SHR3YDL212W CTR86P25355 563 aa3.62□□□□□ -1.83
SHR3YDL212W KRE2P27809 442 aa3.62□□□□□ -1.83
SHR3YDL212W BEM1P29366 551 aa3.62□□□□□ -1.83
SHR3YDL212W RPN12P32496 274 aa3.62□□□□□ -1.83
SHR3YDL212W MNS1P32906 549 aa3.62□□□□□ -1.83
SHR3YDL212W HCS1P34243 683 aa3.62□□□□□ -1.83
SHR3YDL212W KKQ8P36004 724 aa3.62□□□□□ -1.83
SHR3YDL212W FMS1P50264 508 aa3.62□□□□□ -1.83
SHR3YDL212W YGR250CP53316 781 aaKnown RBP3.62□□□□□ -1.83
SHR3YDL212W RHB1P25378 209 aa3.61□□□□□ -1.83
SHR3YDL212W SOR1P35497 357 aaKnown RBP3.61□□□□□ -1.83
SHR3YDL212W GPD2P41911 440 aaKnown RBP3.61□□□□□ -1.83
SHR3YDL212W PHB2P50085 310 aa3.61□□□□□ -1.83
SHR3YDL212W YGL039WP53183 348 aaKnown RBP3.61□□□□□ -1.83
SHR3YDL212W CWC25P53854 179 aaKnown RBP3.61□□□□□ -1.83
SHR3YDL212W SOR2Q07786 357 aa3.61□□□□□ -1.83
SHR3YDL212W RKM1Q08961 583 aaPredicted RBP3.61□□□□□ -1.83
SHR3YDL212W CLB3P24870 427 aa3.6□□□□□ -1.83
SHR3YDL212W HIR2P32480 875 aa3.6□□□□□ -1.83
SHR3YDL212W KAR9P32526 644 aa3.6□□□□□ -1.83
SHR3YDL212W MUD1P32605 298 aaKnown RBP3.6□□□□□ -1.83
SHR3YDL212W APE3P37302 537 aaKnown RBP3.6□□□□□ -1.83
SHR3YDL212W NAB3P38996 802 aaKnown RBP RIP-Chip data3.6□□□□□ -1.83not detected
SHR3YDL212W AZR1P50080 613 aa3.6□□□□□ -1.83
SHR3YDL212W MDM1Q01846 1127 aa3.6□□□□□ -1.83
SHR3YDL212W SKI7Q08491 747 aaPredicted RBP3.6□□□□□ -1.83
SHR3YDL212W SPO12P17123 173 aa3.59□□□□□ -1.83
SHR3YDL212W YME2P32843 850 aa3.59□□□□□ -1.83
SHR3YDL212W BRO1P48582 844 aa3.59□□□□□ -1.83
SHR3YDL212W GPI15P53961 229 aa3.59□□□□□ -1.83
SHR3YDL212W VPS72Q03388 795 aa3.59□□□□□ -1.83
SHR3YDL212W BET5Q03630 159 aa3.59□□□□□ -1.83
SHR3YDL212W RRP45Q05636 305 aaKnown RBP3.59□□□□□ -1.83
SHR3YDL212W SMY1P32364 656 aaKnown RBP3.58□□□□□ -1.84
SHR3YDL212W YHR131CP38835 850 aa3.58□□□□□ -1.84
SHR3YDL212W LSM5P40089 93 aaKnown RBP3.58□□□□□ -1.84
SHR3YDL212W COS5P47187 383 aa3.58□□□□□ -1.84
SHR3YDL212W GIP3Q03016 1276 aa3.58□□□□□ -1.84
SHR3YDL212W RSN1Q03516 953 aa3.58□□□□□ -1.84
SHR3YDL212W YMR155WQ03795 547 aa3.58□□□□□ -1.84
SHR3YDL212W YLR287CQ05881 355 aa3.58□□□□□ -1.84
SHR3YDL212W COS7Q07788 383 aa3.58□□□□□ -1.84
SHR3YDL212W AHC1Q12433 566 aa3.58□□□□□ -1.84
SHR3YDL212W YRF1-4O13559 1382 aa3.57□□□□□ -1.84
SHR3YDL212W POP5P28005 173 aa3.57□□□□□ -1.84
SHR3YDL212W NPL6P32832 435 aa3.57□□□□□ -1.84
SHR3YDL212W YAL037WP39728 267 aa3.57□□□□□ -1.84
SHR3YDL212W JLP2P40206 208 aa3.57□□□□□ -1.84
SHR3YDL212W YGL138CP53122 345 aa3.57□□□□□ -1.84
SHR3YDL212W SHY1P53266 389 aa3.57□□□□□ -1.84
SHR3YDL212W TSA2Q04120 196 aa3.57□□□□□ -1.84
SHR3YDL212W REX4Q08237 289 aa3.57□□□□□ -1.84
SHR3YDL212W WTM1Q12363 437 aaKnown RBP3.57□□□□□ -1.84
SHR3YDL212W INH1P01097 85 aa3.56□□□□□ -1.84
SHR3YDL212W SCEIP03882 235 aa3.56□□□□□ -1.84
SHR3YDL212W NFU1P32860 256 aa3.56□□□□□ -1.84
SHR3YDL212W SRL2Q12020 392 aa3.56□□□□□ -1.84
SHR3YDL212W YRM1Q12340 786 aa3.56□□□□□ -1.84
SHR3YDL212W CLC1P17891 233 aa3.55□□□□□ -1.84
SHR3YDL212W PCL1P24867 279 aa3.55□□□□□ -1.84
SHR3YDL212W CSE2P33308 149 aa3.55□□□□□ -1.84
SHR3YDL212W MRPL10P36520 322 aa3.55□□□□□ -1.84
SHR3YDL212W NTC20P38302 140 aaPredicted RBP3.55□□□□□ -1.84
SHR3YDL212W RRP4P38792 359 aaKnown RBP3.55□□□□□ -1.84
SHR3YDL212W PHO86P46956 311 aa3.55□□□□□ -1.84
SHR3YDL212W PEX25Q02969 394 aa3.55□□□□□ -1.84
SHR3YDL212W TAF12Q03761 539 aa3.55□□□□□ -1.84
SHR3YDL212W YMR027WQ04371 470 aa3.55□□□□□ -1.84
SHR3YDL212W ROY1Q04847 553 aa3.55□□□□□ -1.84
SHR3YDL212W SCM3Q12334 223 aa3.55□□□□□ -1.84
SHR3YDL212W PRS1P32895 427 aaKnown RBP3.54□□□□□ -1.84
SHR3YDL212W UTH1P36135 365 aa3.54□□□□□ -1.84
SHR3YDL212W YJR085CP47131 105 aaKnown RBP3.54□□□□□ -1.84
SHR3YDL212W RHO5P53879 331 aaKnown RBP3.54□□□□□ -1.84
SHR3YDL212W BNI5P53890 448 aaKnown RBP3.54□□□□□ -1.84
SHR3YDL212W SKO1Q02100 647 aa3.54□□□□□ -1.84
SHR3YDL212W OAZ1Q02803 292 aa3.54□□□□□ -1.84
SHR3YDL212W BCH1Q05029 724 aa3.54□□□□□ -1.84
SHR3YDL212W SNT309Q06091 175 aaPredicted RBP3.54□□□□□ -1.84
SHR3YDL212W DIS3Q08162 1001 aaKnown RBP3.54□□□□□ -1.84
SHR3YDL212W HSP42Q12329 375 aa3.54□□□□□ -1.84
SHR3YDL212W TY1B-AO13527 1196 aaKnown RBP3.53□□□□□ -1.84
SHR3YDL212W YCR051WP25631 222 aa3.53□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 53 ms