RNA–Protein interactions for RNA: ENST00000565832.5

CHD9-217, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 2,169 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-217ENST00000565832 VGLL4Q14135 290 aa7.01□□□□□ -1.29
CHD9-217ENST00000565832 MORC3Q14149 939 aa7.01□□□□□ -1.29
CHD9-217ENST00000565832 KLHL10Q6JEL2 608 aa7.01□□□□□ -1.29
CHD9-217ENST00000565832 KCNK18Q7Z418 384 aa7.01□□□□□ -1.29
CHD9-217ENST00000565832 CABP7Q86V35 215 aa7.01□□□□□ -1.29
CHD9-217ENST00000565832 HPS3Q969F9 1004 aa7.01□□□□□ -1.29
CHD9-217ENST00000565832 LENG9Q96B70 501 aa7.01□□□□□ -1.29
CHD9-217ENST00000565832 DCPSQ96C86 337 aaKnown RBP7.01□□□□□ -1.29
CHD9-217ENST00000565832 HOOK2Q96ED9 719 aa7.01□□□□□ -1.29
CHD9-217ENST00000565832 SLF1Q9BQI6 1058 aa7.01□□□□□ -1.29
CHD9-217ENST00000565832 SH2D4AQ9H788 454 aa7.01□□□□□ -1.29
CHD9-217ENST00000565832 RRAGDQ9NQL2 400 aaPredicted RBP7.01□□□□□ -1.29
CHD9-217ENST00000565832 COL20A1Q9P218 1284 aa7.01□□□□□ -1.29
CHD9-217ENST00000565832 CCPG1Q9ULG6 757 aa7.01□□□□□ -1.29
CHD9-217ENST00000565832 PCDHA12Q9UN75 941 aa7.01□□□□□ -1.29
CHD9-217ENST00000565832 LAD1O00515 517 aa7□□□□□ -1.29
CHD9-217ENST00000565832 MARCH6O60337 910 aa7□□□□□ -1.29
CHD9-217ENST00000565832 STX17P56962 302 aa7□□□□□ -1.29
CHD9-217ENST00000565832 SUPT20HL1Q3ZLR7 823 aa7□□□□□ -1.29
CHD9-217ENST00000565832 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7□□□□□ -1.293e-9■■■□□ 16.8
CHD9-217ENST00000565832 ATG4CQ96DT6 458 aa7□□□□□ -1.29
CHD9-217ENST00000565832 EEF2KMTQ96G04 330 aa7□□□□□ -1.29
CHD9-217ENST00000565832 PNMA5Q96PV4 448 aa7□□□□□ -1.29
CHD9-217ENST00000565832 CCSER1Q9C0I3 900 aa7□□□□□ -1.29
CHD9-217ENST00000565832 NAT10Q9H0A0 1025 aaKnown RBP7□□□□□ -1.29
CHD9-217ENST00000565832 ALG2Q9H553 416 aa7□□□□□ -1.29
CHD9-217ENST00000565832 FANCLQ9NW38 375 aa7□□□□□ -1.29
CHD9-217ENST00000565832 AFG3L2Q9Y4W6 797 aa7□□□□□ -1.29
CHD9-217ENST00000565832 GCOM1H8Y6P7 765 aaPredicted RBP6.99□□□□□ -1.29
CHD9-217ENST00000565832 VWA5AO00534 786 aa6.99□□□□□ -1.29
CHD9-217ENST00000565832 WDR46O15213 610 aaKnown RBP6.99□□□□□ -1.29
CHD9-217ENST00000565832 MSH4O15457 936 aa6.99□□□□□ -1.29
CHD9-217ENST00000565832 ICAM1P05362 532 aa6.99□□□□□ -1.29
CHD9-217ENST00000565832 POLR2MP0CAP2 368 aa6.99□□□□□ -1.29
CHD9-217ENST00000565832 EPHX2P34913 555 aa6.99□□□□□ -1.29
CHD9-217ENST00000565832 USP11P51784 963 aa6.99□□□□□ -1.29
CHD9-217ENST00000565832 GRB10Q13322 594 aa6.99□□□□□ -1.29
CHD9-217ENST00000565832 TREML2Q5T2D2 321 aa6.99□□□□□ -1.29
CHD9-217ENST00000565832 KANK3Q6NY19 840 aa6.99□□□□□ -1.29
CHD9-217ENST00000565832 FAM160B2Q86V87 743 aa6.99□□□□□ -1.29
CHD9-217ENST00000565832 ELOA2Q8IYF1 753 aaPredicted RBP6.99□□□□□ -1.29
CHD9-217ENST00000565832 RETREG2Q8NC44 543 aa6.99□□□□□ -1.29
CHD9-217ENST00000565832 CLEC4DQ8WXI8 215 aa6.99□□□□□ -1.29
CHD9-217ENST00000565832 LPAR1Q92633 364 aa6.99□□□□□ -1.29
CHD9-217ENST00000565832 WDR18Q9BV38 432 aa6.99□□□□□ -1.29
CHD9-217ENST00000565832 SLC38A10Q9HBR0 1119 aa6.99□□□□□ -1.29
CHD9-217ENST00000565832 POLD4Q9HCU8 107 aa6.99□□□□□ -1.29
CHD9-217ENST00000565832 HOOK1Q9UJC3 728 aaKnown RBP6.99□□□□□ -1.29
CHD9-217ENST00000565832 PPP1R9AQ9ULJ8 1098 aa6.99□□□□□ -1.29
CHD9-217ENST00000565832 GDAQ9Y2T3 454 aa6.99□□□□□ -1.29
CHD9-217ENST00000565832 SNCAIPQ9Y6H5 919 aa6.99□□□□□ -1.29
CHD9-217ENST00000565832 CYP3A7-CYP3A51PA0A087WV96 503 aa6.99□□□□□ -1.29
CHD9-217ENST00000565832 PIK3CDO00329 1044 aa6.99□□□□□ -1.29
CHD9-217ENST00000565832 TRAF5O00463 557 aa6.99□□□□□ -1.29
CHD9-217ENST00000565832 MEIS1O00470 390 aa6.99□□□□□ -1.29
CHD9-217ENST00000565832 PLA2G6O60733 806 aa6.99□□□□□ -1.29
CHD9-217ENST00000565832 CAVIN2O95810 425 aa6.99□□□□□ -1.29
CHD9-217ENST00000565832 PTMAP06454 111 aaKnown RBP6.99□□□□□ -1.29
CHD9-217ENST00000565832 CYP3A7P24462 503 aa6.99□□□□□ -1.29
CHD9-217ENST00000565832 ZNF76P36508 570 aa6.99□□□□□ -1.29
CHD9-217ENST00000565832 SREBF1P36956 1147 aa6.99□□□□□ -1.29
CHD9-217ENST00000565832 TXLNAP40222 546 aa6.99□□□□□ -1.29
CHD9-217ENST00000565832 ZNF75DP51815 510 aa6.99□□□□□ -1.29
CHD9-217ENST00000565832 ARID5BQ14865 1188 aa6.99□□□□□ -1.29
CHD9-217ENST00000565832 PLA2G4DQ86XP0 818 aa6.99□□□□□ -1.29
CHD9-217ENST00000565832 IL31RAQ8NI17 732 aa6.99□□□□□ -1.29
CHD9-217ENST00000565832 ETNPPLQ8TBG4 499 aa6.99□□□□□ -1.29
CHD9-217ENST00000565832 R3HDMLQ9H3Y0 253 aa6.99□□□□□ -1.29
CHD9-217ENST00000565832 ELP3Q9H9T3 547 aa6.99□□□□□ -1.29
CHD9-217ENST00000565832 KCNMB3Q9NPA1 279 aa6.99□□□□□ -1.29
CHD9-217ENST00000565832 SAMSN1Q9NSI8 373 aaKnown RBP6.99□□□□□ -1.29
CHD9-217ENST00000565832 BLOC1S4Q9NUP1 217 aa6.99□□□□□ -1.29
CHD9-217ENST00000565832 KBTBD4Q9NVX7 518 aa6.99□□□□□ -1.29
CHD9-217ENST00000565832 MAP10Q9P2G4 905 aa6.99□□□□□ -1.29
CHD9-217ENST00000565832 PHIPQ8WWQ0 1821 aa6.98□□□□□ -1.29
CHD9-217ENST00000565832 IGLV3-22A0A075B6J6 115 aa6.98□□□□□ -1.29
CHD9-217ENST00000565832 GLTPD2A6NH11 291 aa6.98□□□□□ -1.29
CHD9-217ENST00000565832 E9PMD0 336 aa6.98□□□□□ -1.29
CHD9-217ENST00000565832 ZBTB39O15060 712 aa6.98□□□□□ -1.29
CHD9-217ENST00000565832 RPN1P04843 607 aaKnown RBP6.98□□□□□ -1.29
CHD9-217ENST00000565832 ARP10275 920 aa6.98□□□□□ -1.29
CHD9-217ENST00000565832 RFX1P22670 979 aa6.98□□□□□ -1.29
CHD9-217ENST00000565832 COPS2P61201 443 aa6.98□□□□□ -1.29
CHD9-217ENST00000565832 PSMC6P62333 389 aa6.98□□□□□ -1.29
CHD9-217ENST00000565832 RAD51AP2Q09MP3 1159 aa6.98□□□□□ -1.29
CHD9-217ENST00000565832 AP3B2Q13367 1082 aa6.98□□□□□ -1.29
CHD9-217ENST00000565832 PDIA5Q14554 519 aa6.98□□□□□ -1.29
CHD9-217ENST00000565832 CCDC144BQ3MJ40 725 aa6.98□□□□□ -1.29
CHD9-217ENST00000565832 MAP1SQ66K74 1059 aaPredicted RBP6.98□□□□□ -1.29
CHD9-217ENST00000565832 DYMQ7RTS9 669 aa6.98□□□□□ -1.29
CHD9-217ENST00000565832 DRC7Q8IY82 874 aa6.98□□□□□ -1.29
CHD9-217ENST00000565832 SNX29Q8TEQ0 813 aa6.98□□□□□ -1.29
CHD9-217ENST00000565832 AK8Q96MA6 479 aa6.98□□□□□ -1.29
CHD9-217ENST00000565832 NAP1L5Q96NT1 182 aaPredicted RBP6.98□□□□□ -1.29
CHD9-217ENST00000565832 TRERF1Q96PN7 1200 aa6.98□□□□□ -1.29
CHD9-217ENST00000565832 GSDMAQ96QA5 445 aa6.98□□□□□ -1.29
CHD9-217ENST00000565832 GLT8D2Q9H1C3 349 aa6.98□□□□□ -1.29
CHD9-217ENST00000565832 BCAS3Q9H6U6 928 aa6.98□□□□□ -1.29
CHD9-217ENST00000565832 PKD2L1Q9P0L9 805 aa6.98□□□□□ -1.29
CHD9-217ENST00000565832 CCDC39Q9UFE4 941 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms