RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 GIMAP8Q8ND71 665 aaPredicted RBP7.62□□□□□ -1.19
SLIRP-203ENST00000554074 SMARCC2Q8TAQ2 1214 aa7.62□□□□□ -1.19
SLIRP-203ENST00000554074 PPP1R13LQ8WUF5 828 aa7.62□□□□□ -1.19
SLIRP-203ENST00000554074 ATXN2LQ8WWM7 1075 aaKnown RBP7.62□□□□□ -1.19
SLIRP-203ENST00000554074 ALG1Q9BT22 464 aa7.62□□□□□ -1.19
SLIRP-203ENST00000554074 USP26Q9BXU7 913 aa7.62□□□□□ -1.19
SLIRP-203ENST00000554074 FTOQ9C0B1 505 aaKnown RBP eCLIP7.62□□□□□ -1.19
SLIRP-203ENST00000554074 MLXIPQ9HAP2 919 aa7.62□□□□□ -1.19
SLIRP-203ENST00000554074 TTC3P53804 2025 aa7.62□□□□□ -1.19
SLIRP-203ENST00000554074 COL4A6Q14031 1691 aa7.61□□□□□ -1.19
SLIRP-203ENST00000554074 H3BRB1 525 aa7.61□□□□□ -1.19
SLIRP-203ENST00000554074 NOP56O00567 594 aaKnown RBP7.61□□□□□ -1.19
SLIRP-203ENST00000554074 NBNO60934 754 aa7.61□□□□□ -1.19
SLIRP-203ENST00000554074 LGALS2P05162 132 aa7.61□□□□□ -1.19
SLIRP-203ENST00000554074 CA3P07451 260 aa7.61□□□□□ -1.19
SLIRP-203ENST00000554074 MYOGP15173 224 aa7.61□□□□□ -1.19
SLIRP-203ENST00000554074 KCNJ6P48051 423 aa7.61□□□□□ -1.19
SLIRP-203ENST00000554074 CHMP4BP1P59074 171 aa7.61□□□□□ -1.19
SLIRP-203ENST00000554074 WDR5P61964 334 aaKnown RBP7.61□□□□□ -1.19
SLIRP-203ENST00000554074 SEMA3FQ13275 785 aa7.61□□□□□ -1.19
SLIRP-203ENST00000554074 TSGA10IPQ3SY00 556 aa7.61□□□□□ -1.19
SLIRP-203ENST00000554074 TJAP1Q5JTD0 557 aa7.61□□□□□ -1.19
SLIRP-203ENST00000554074 NFXL1Q6ZNB6 911 aa7.61□□□□□ -1.19
SLIRP-203ENST00000554074 CENPQQ7L2Z9 268 aaPredicted RBP7.61□□□□□ -1.19
SLIRP-203ENST00000554074 NLRX1Q86UT6 975 aa7.61□□□□□ -1.19
SLIRP-203ENST00000554074 SRBD1Q8N5C6 995 aaKnown RBP7.61□□□□□ -1.19
SLIRP-203ENST00000554074 FANCBQ8NB91 859 aa7.61□□□□□ -1.19
SLIRP-203ENST00000554074 GPKOWQ92917 476 aaPredicted RBP eCLIP7.61□□□□□ -1.19
SLIRP-203ENST00000554074 GPRASP2Q96D09 838 aa7.61□□□□□ -1.19
SLIRP-203ENST00000554074 CDHR1Q96JP9 859 aa7.61□□□□□ -1.19
SLIRP-203ENST00000554074 GPR20Q99678 358 aa7.61□□□□□ -1.19
SLIRP-203ENST00000554074 MYL10Q9BUA6 226 aa7.61□□□□□ -1.19
SLIRP-203ENST00000554074 TUT1Q9H6E5 874 aaKnown RBP7.61□□□□□ -1.19
SLIRP-203ENST00000554074 ANO2Q9NQ90 1003 aa7.61□□□□□ -1.19
SLIRP-203ENST00000554074 PPP4R2Q9NY27 417 aa7.61□□□□□ -1.19
SLIRP-203ENST00000554074 THEGQ9P2T0 379 aa7.61□□□□□ -1.19
SLIRP-203ENST00000554074 SLC12A7Q9Y666 1083 aa7.61□□□□□ -1.19
SLIRP-203ENST00000554074 ATG2AQ2TAZ0 1938 aa7.6□□□□□ -1.19
SLIRP-203ENST00000554074 C17orf102A2RUQ5 167 aa7.6□□□□□ -1.19
SLIRP-203ENST00000554074 MAFGO15525 162 aa7.6□□□□□ -1.19
SLIRP-203ENST00000554074 LGR5O75473 907 aa7.6□□□□□ -1.19
SLIRP-203ENST00000554074 PLEKHA8P1O95397 391 aa7.6□□□□□ -1.19
SLIRP-203ENST00000554074 SMIM10L2AP0DMW4 78 aa7.6□□□□□ -1.19
SLIRP-203ENST00000554074 SMIM10L2BP0DMW5 78 aa7.6□□□□□ -1.19
SLIRP-203ENST00000554074 GNAT1P11488 350 aa7.6□□□□□ -1.19
SLIRP-203ENST00000554074 RCAN1P53805 252 aa7.6□□□□□ -1.19
SLIRP-203ENST00000554074 EXOSC10Q01780 885 aaKnown RBP7.6□□□□□ -1.19
SLIRP-203ENST00000554074 TAP1Q03518 808 aa7.6□□□□□ -1.19
SLIRP-203ENST00000554074 MKRN4PQ13434 485 aaPredicted RBP7.6□□□□□ -1.19
SLIRP-203ENST00000554074 IKBKEQ14164 716 aa7.6□□□□□ -1.19
SLIRP-203ENST00000554074 HIC1Q14526 733 aa7.6□□□□□ -1.19
SLIRP-203ENST00000554074 KRT32Q14532 448 aa7.6□□□□□ -1.19
SLIRP-203ENST00000554074 ZNF618Q5T7W0 954 aa7.6□□□□□ -1.19
SLIRP-203ENST00000554074 USP17L6PQ6QN14 398 aa7.6□□□□□ -1.19
SLIRP-203ENST00000554074 TMTC3Q6ZXV5 915 aa7.6□□□□□ -1.19
SLIRP-203ENST00000554074 ATP6V0A1Q93050 837 aa7.6□□□□□ -1.19
SLIRP-203ENST00000554074 WNT8BQ93098 351 aa7.6□□□□□ -1.19
SLIRP-203ENST00000554074 CCDC136Q96JN2 1154 aa7.6□□□□□ -1.19
SLIRP-203ENST00000554074 NEK1Q96PY6 1258 aa7.6□□□□□ -1.19
SLIRP-203ENST00000554074 TSPYL2Q9H2G4 693 aaPredicted RBP7.6□□□□□ -1.19
SLIRP-203ENST00000554074 PSTPIP2Q9H939 334 aa7.6□□□□□ -1.19
SLIRP-203ENST00000554074 RBM28Q9NW13 759 aaKnown RBP7.6□□□□□ -1.19
SLIRP-203ENST00000554074 RAPGEFL1Q9UHV5 662 aa7.6□□□□□ -1.19
SLIRP-203ENST00000554074 ZNF215Q9UL58 517 aaPredicted RBP7.6□□□□□ -1.19
SLIRP-203ENST00000554074 RSPH10B2B2RC85 870 aa7.59□□□□□ -1.19
SLIRP-203ENST00000554074 hCG_1984214I3L0E3 225 aa7.59□□□□□ -1.19
SLIRP-203ENST00000554074 GTPBP6O43824 516 aaPredicted RBP7.59□□□□□ -1.19
SLIRP-203ENST00000554074 TLL1O43897 1013 aa7.59□□□□□ -1.19
SLIRP-203ENST00000554074 GJB5O95377 273 aa7.59□□□□□ -1.19
SLIRP-203ENST00000554074 HMGB1P09429 215 aaKnown RBP7.59□□□□□ -1.19
SLIRP-203ENST00000554074 RSPH10BP0C881 870 aa7.59□□□□□ -1.19
SLIRP-203ENST00000554074 IGFBP4P22692 258 aa7.59□□□□□ -1.19
SLIRP-203ENST00000554074 THPOP40225 353 aa7.59□□□□□ -1.19
SLIRP-203ENST00000554074 ADAM17P78536 824 aa7.59□□□□□ -1.19
SLIRP-203ENST00000554074 MRPS5P82675 430 aaKnown RBP7.59□□□□□ -1.19
SLIRP-203ENST00000554074 ZNF200P98182 395 aaPredicted RBP7.59□□□□□ -1.19
SLIRP-203ENST00000554074 COL9A3Q14050 684 aaPredicted RBP7.59□□□□□ -1.19
SLIRP-203ENST00000554074 MBTPS1Q14703 1052 aa7.59□□□□□ -1.19
SLIRP-203ENST00000554074 PLEKHG4Q58EX7 1191 aa7.59□□□□□ -1.19
SLIRP-203ENST00000554074 PPP1R18Q6NYC8 613 aa7.59□□□□□ -1.19
SLIRP-203ENST00000554074 APOA5Q6Q788 366 aa7.59□□□□□ -1.19
SLIRP-203ENST00000554074 SYNE3Q6ZMZ3 975 aa7.59□□□□□ -1.19
SLIRP-203ENST00000554074 CYFIP1Q7L576 1253 aa7.59□□□□□ -1.19
SLIRP-203ENST00000554074 DHX32Q7L7V1 743 aaKnown RBP7.59□□□□□ -1.19
SLIRP-203ENST00000554074 RPAINQ86UA6 219 aa7.59□□□□□ -1.19
SLIRP-203ENST00000554074 ZNF713Q8N859 430 aaPredicted RBP7.59□□□□□ -1.19
SLIRP-203ENST00000554074 PIBF1Q8WXW3 757 aa7.59□□□□□ -1.19
SLIRP-203ENST00000554074 ZFP91Q96JP5 570 aaPredicted RBP7.59□□□□□ -1.19
SLIRP-203ENST00000554074 ASB2Q96Q27 587 aa7.59□□□□□ -1.19
SLIRP-203ENST00000554074 RAD9AQ99638 391 aa7.59□□□□□ -1.19
SLIRP-203ENST00000554074 RNPEPQ9H4A4 650 aa7.59□□□□□ -1.19
SLIRP-203ENST00000554074 EHMT1Q9H9B1 1298 aa7.59□□□□□ -1.19
SLIRP-203ENST00000554074 RTEL1Q9NZ71 1219 aa7.59□□□□□ -1.19
SLIRP-203ENST00000554074 LMCD1Q9NZU5 365 aa7.59□□□□□ -1.19
SLIRP-203ENST00000554074 UBIAD1Q9Y5Z9 338 aa7.59□□□□□ -1.19
SLIRP-203ENST00000554074 MYO7AQ13402 2215 aa7.59□□□□□ -1.19
SLIRP-203ENST00000554074 BDP1A6H8Y1 2624 aa7.59□□□□□ -1.19
SLIRP-203ENST00000554074 CNTNAP5Q8WYK1 1306 aa7.58□□□□□ -1.2
SLIRP-203ENST00000554074 NRCAMQ92823 1304 aa7.58□□□□□ -1.2
SLIRP-203ENST00000554074 SPTBN5Q9NRC6 3674 aaKnown RBP7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms