RNA–Protein interactions for RNA: ENST00000544327.1

SCARB1-208, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 1,812 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-208ENST00000544327 ST7Q9NRC1 585 aa19.63■□□□□ 0.73
SCARB1-208ENST00000544327 ARHGAP20Q9P2F6 1191 aa19.63■□□□□ 0.73
SCARB1-208ENST00000544327 MED24O75448 989 aa19.62■□□□□ 0.73
SCARB1-208ENST00000544327 ATP1A1P05023 1023 aaKnown RBP19.62■□□□□ 0.73
SCARB1-208ENST00000544327 CKAP4Q07065 602 aaKnown RBP19.62■□□□□ 0.73
SCARB1-208ENST00000544327 KIF5AQ12840 1032 aa19.62■□□□□ 0.73
SCARB1-208ENST00000544327 MAPK8IP2Q13387 824 aaPredicted RBP19.62■□□□□ 0.73
SCARB1-208ENST00000544327 PDXDC1Q6P996 788 aa19.62■□□□□ 0.73
SCARB1-208ENST00000544327 ERMNQ8TAM6 284 aa19.62■□□□□ 0.73
SCARB1-208ENST00000544327 C7orf43Q8WVR3 580 aa19.62■□□□□ 0.73
SCARB1-208ENST00000544327 SYN2Q92777 582 aaPredicted RBP19.62■□□□□ 0.73
SCARB1-208ENST00000544327 GBP3Q9H0R5 595 aa19.62■□□□□ 0.73
SCARB1-208ENST00000544327 NUCKS1Q9H1E3 243 aaKnown RBP19.62■□□□□ 0.73
SCARB1-208ENST00000544327 KCTD10Q9H3F6 313 aa19.62■□□□□ 0.73
SCARB1-208ENST00000544327 USO1O60763 962 aaKnown RBP19.62■□□□□ 0.73
SCARB1-208ENST00000544327 TFRCP02786 760 aaKnown RBP19.62■□□□□ 0.73
SCARB1-208ENST00000544327 EDRF1Q3B7T1 1238 aa19.62■□□□□ 0.73
SCARB1-208ENST00000544327 WDR93Q6P2C0 686 aa19.62■□□□□ 0.73
SCARB1-208ENST00000544327 KCTD17Q8N5Z5 321 aa19.62■□□□□ 0.73
SCARB1-208ENST00000544327 NEK11Q8NG66 645 aa19.62■□□□□ 0.73
SCARB1-208ENST00000544327 MMRN2Q9H8L6 949 aa19.62■□□□□ 0.73
SCARB1-208ENST00000544327 FAM207AQ9NSI2 230 aaPredicted RBP19.62■□□□□ 0.73
SCARB1-208ENST00000544327 TFR2Q9UP52 801 aa19.62■□□□□ 0.73
SCARB1-208ENST00000544327 SSU72P8A0A1W2PR75 194 aa19.61■□□□□ 0.73
SCARB1-208ENST00000544327 PIK3CDO00329 1044 aa19.61■□□□□ 0.73
SCARB1-208ENST00000544327 TRAF5O00463 557 aa19.61■□□□□ 0.73
SCARB1-208ENST00000544327 CYP3A4P08684 503 aa19.61■□□□□ 0.73
SCARB1-208ENST00000544327 BMP3P12645 472 aa19.61■□□□□ 0.73
SCARB1-208ENST00000544327 RPA1P27694 616 aa19.61■□□□□ 0.73
SCARB1-208ENST00000544327 KIF11P52732 1056 aa19.61■□□□□ 0.73
SCARB1-208ENST00000544327 KCNMA1Q12791 1236 aa19.61■□□□□ 0.73
SCARB1-208ENST00000544327 ARSHQ5FYA8 562 aa19.61■□□□□ 0.73
SCARB1-208ENST00000544327 RBM26Q5T8P6 1007 aaKnown RBP19.61■□□□□ 0.73
SCARB1-208ENST00000544327 CC2D2BQ6DHV5 1058 aa19.61■□□□□ 0.73
SCARB1-208ENST00000544327 NCAPH2Q6IBW4 605 aa19.61■□□□□ 0.73
SCARB1-208ENST00000544327 SCFD1Q8WVM8 642 aa19.61■□□□□ 0.73
SCARB1-208ENST00000544327 SECISBP2LQ93073 1101 aaKnown RBP19.61■□□□□ 0.73
SCARB1-208ENST00000544327 FGFBP2Q9BYJ0 223 aa19.61■□□□□ 0.73
SCARB1-208ENST00000544327 PCDHA13Q9Y5I0 950 aa19.61■□□□□ 0.73
SCARB1-208ENST00000544327 LRRC53A6NM62 1247 aa19.6■□□□□ 0.73
SCARB1-208ENST00000544327 PJA2O43164 708 aa19.6■□□□□ 0.73
SCARB1-208ENST00000544327 RAD21O60216 631 aa19.6■□□□□ 0.73
SCARB1-208ENST00000544327 GDF11O95390 407 aa19.6■□□□□ 0.73
SCARB1-208ENST00000544327 SSBP05455 408 aaKnown RBP eCLIP19.6■□□□□ 0.73
SCARB1-208ENST00000544327 PLEKP08567 350 aaPredicted RBP19.6■□□□□ 0.73
SCARB1-208ENST00000544327 STAT3P40763 770 aa19.6■□□□□ 0.73
SCARB1-208ENST00000544327 ASTE1Q2TB18 679 aaPredicted RBP19.6■□□□□ 0.73
SCARB1-208ENST00000544327 CCDC40Q4G0X9 1142 aa19.6■□□□□ 0.73
SCARB1-208ENST00000544327 MSL1Q68DK7 614 aa19.6■□□□□ 0.73
SCARB1-208ENST00000544327 TRIM59Q8IWR1 403 aa19.6■□□□□ 0.73
SCARB1-208ENST00000544327 NOA1Q8NC60 698 aaKnown RBP19.6■□□□□ 0.73
SCARB1-208ENST00000544327 SUPT20HQ8NEM7 779 aa19.6■□□□□ 0.73
SCARB1-208ENST00000544327 SH2D4AQ9H788 454 aa19.6■□□□□ 0.73
SCARB1-208ENST00000544327 CEP72Q9P209 647 aa19.6■□□□□ 0.73
SCARB1-208ENST00000544327 FAM184BQ9ULE4 1060 aa19.6■□□□□ 0.73
SCARB1-208ENST00000544327 SPDYE3A6NKU9 549 aa19.6■□□□□ 0.73
SCARB1-208ENST00000544327 EIF4A3P38919 411 aaKnown RBP19.6■□□□□ 0.73
SCARB1-208ENST00000544327 CYP27A1Q02318 531 aa19.6■□□□□ 0.73
SCARB1-208ENST00000544327 TRAF1Q13077 416 aa19.6■□□□□ 0.73
SCARB1-208ENST00000544327 HERC4Q5GLZ8 1057 aaPredicted RBP19.6■□□□□ 0.73
SCARB1-208ENST00000544327 RRAGAQ7L523 313 aa19.6■□□□□ 0.73
SCARB1-208ENST00000544327 CATSPER3Q86XQ3 398 aa19.6■□□□□ 0.73
SCARB1-208ENST00000544327 TXLNBQ8N3L3 684 aa19.6■□□□□ 0.73
SCARB1-208ENST00000544327 SYT2Q8N9I0 419 aaPredicted RBP19.6■□□□□ 0.73
SCARB1-208ENST00000544327 TRIM58Q8NG06 486 aa19.6■□□□□ 0.73
SCARB1-208ENST00000544327 IFIH1Q9BYX4 1025 aaKnown RBP19.6■□□□□ 0.73
SCARB1-208ENST00000544327 TDRD3Q9H7E2 651 aaKnown RBP19.6■□□□□ 0.73
SCARB1-208ENST00000544327 HDAC6Q9UBN7 1215 aa19.6■□□□□ 0.73
SCARB1-208ENST00000544327 HERC5Q9UII4 1024 aaKnown RBP19.6■□□□□ 0.73
SCARB1-208ENST00000544327 L1RE1Q9UN81 338 aa19.6■□□□□ 0.73
SCARB1-208ENST00000544327 ENC1O14682 589 aa19.59■□□□□ 0.73
SCARB1-208ENST00000544327 GH2P01242 217 aa19.59■□□□□ 0.73
SCARB1-208ENST00000544327 SPATA31C1P0DKV0 1188 aa19.59■□□□□ 0.73
SCARB1-208ENST00000544327 JAG1P78504 1218 aa19.59■□□□□ 0.73
SCARB1-208ENST00000544327 SMC1AQ14683 1233 aaKnown RBP19.59■□□□□ 0.73
SCARB1-208ENST00000544327 PRR16Q569H4 304 aa19.59■□□□□ 0.73
SCARB1-208ENST00000544327 HDXQ7Z353 690 aa19.59■□□□□ 0.73
SCARB1-208ENST00000544327 EMILIN3Q9NT22 766 aa19.59■□□□□ 0.73
SCARB1-208ENST00000544327 TNS1Q9HBL0 1735 aaKnown RBP19.59■□□□□ 0.73
SCARB1-208ENST00000544327 POTEFA5A3E0 1075 aa19.58■□□□□ 0.73
SCARB1-208ENST00000544327 RBAK-RBAKDNI3L0D1 243 aa19.58■□□□□ 0.73
SCARB1-208ENST00000544327 OPLAHO14841 1288 aa19.58■□□□□ 0.73
SCARB1-208ENST00000544327 POTEIP0CG38 1075 aa19.58■□□□□ 0.73
SCARB1-208ENST00000544327 PRLRP16471 622 aa19.58■□□□□ 0.73
SCARB1-208ENST00000544327 USP14P54578 494 aa19.58■□□□□ 0.73
SCARB1-208ENST00000544327 AOC3Q16853 763 aa19.58■□□□□ 0.73
SCARB1-208ENST00000544327 POTEGQ6S5H5 508 aa19.58■□□□□ 0.73
SCARB1-208ENST00000544327 POTEEQ6S8J3 1075 aa19.58■□□□□ 0.73
SCARB1-208ENST00000544327 ZNF572Q7Z3I7 529 aaPredicted RBP19.58■□□□□ 0.73
SCARB1-208ENST00000544327 POLR3CQ9BUI4 534 aaPredicted RBP19.58■□□□□ 0.73
SCARB1-208ENST00000544327 VAV3Q9UKW4 847 aa19.58■□□□□ 0.73
SCARB1-208ENST00000544327 JRKLQ9Y4A0 524 aa19.58■□□□□ 0.73
SCARB1-208ENST00000544327 NPHP3-ACAD11A0A0J9YXS1 232 aa19.58■□□□□ 0.72
SCARB1-208ENST00000544327 TARSL2A2RTX5 802 aaKnown RBP19.58■□□□□ 0.72
SCARB1-208ENST00000544327 FAM86B1E9PN63 330 aa19.58■□□□□ 0.72
SCARB1-208ENST00000544327 TACC1O75410 805 aa19.58■□□□□ 0.72
SCARB1-208ENST00000544327 NOL4O94818 638 aa19.58■□□□□ 0.72
SCARB1-208ENST00000544327 FAM86B2P0C5J1 330 aa19.58■□□□□ 0.72
SCARB1-208ENST00000544327 RHOXF2BP0C7M4 288 aa19.58■□□□□ 0.72
SCARB1-208ENST00000544327 MCM3P25205 808 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms