RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-222ENST00000532504 FAM167AQ96KS9 214 aa17.27■□□□□ 0.35
PPFIA1-222ENST00000532504 CEP55Q53EZ4 464 aa17.27■□□□□ 0.35
PPFIA1-222ENST00000532504 ZNF569Q5MCW4 686 aa17.27■□□□□ 0.35
PPFIA1-222ENST00000532504 ARL6IP4Q66PJ3 421 aaKnown RBP17.27■□□□□ 0.35
PPFIA1-222ENST00000532504 MB21D1Q8N884 522 aa17.27■□□□□ 0.35
PPFIA1-222ENST00000532504 DPF2Q92785 391 aa17.27■□□□□ 0.35
PPFIA1-222ENST00000532504 FAM20AQ96MK3 541 aa17.27■□□□□ 0.35
PPFIA1-222ENST00000532504 FANCLQ9NW38 375 aa17.27■□□□□ 0.35
PPFIA1-222ENST00000532504 NR3C2P08235 984 aa17.26■□□□□ 0.35
PPFIA1-222ENST00000532504 SNX16P57768 344 aa17.26■□□□□ 0.35
PPFIA1-222ENST00000532504 TSGA10IPQ3SY00 556 aa17.26■□□□□ 0.35
PPFIA1-222ENST00000532504 SH2D3AQ9BRG2 576 aa17.26■□□□□ 0.35
PPFIA1-222ENST00000532504 SFMBT2Q5VUG0 894 aa17.26■□□□□ 0.35
PPFIA1-222ENST00000532504 JMJD4Q9H9V9 463 aa17.26■□□□□ 0.35
PPFIA1-222ENST00000532504 AGTPBP1Q9UPW5 1226 aa17.26■□□□□ 0.35
PPFIA1-222ENST00000532504 XPOTO43592 962 aaKnown RBP17.26■□□□□ 0.35
PPFIA1-222ENST00000532504 PADI6Q6TGC4 694 aa17.26■□□□□ 0.35
PPFIA1-222ENST00000532504 GBP6Q6ZN66 633 aa17.26■□□□□ 0.35
PPFIA1-222ENST00000532504 RHPN2Q8IUC4 686 aa17.26■□□□□ 0.35
PPFIA1-222ENST00000532504 NUP58Q9BVL2 599 aa17.26■□□□□ 0.35
PPFIA1-222ENST00000532504 ATP6V0A4Q9HBG4 840 aa17.26■□□□□ 0.35
PPFIA1-222ENST00000532504 TRIM14Q14142 442 aa17.26■□□□□ 0.35
PPFIA1-222ENST00000532504 POTEFA5A3E0 1075 aa17.25■□□□□ 0.35
PPFIA1-222ENST00000532504 PP2D1A8MPX8 630 aa17.25■□□□□ 0.35
PPFIA1-222ENST00000532504 POTEIP0CG38 1075 aa17.25■□□□□ 0.35
PPFIA1-222ENST00000532504 POTEGQ6S5H5 508 aa17.25■□□□□ 0.35
PPFIA1-222ENST00000532504 POTEEQ6S8J3 1075 aa17.25■□□□□ 0.35
PPFIA1-222ENST00000532504 OTUD6BQ8N6M0 293 aa17.25■□□□□ 0.35
PPFIA1-222ENST00000532504 MICAL1Q8TDZ2 1067 aa17.25■□□□□ 0.35
PPFIA1-222ENST00000532504 GSDMAQ96QA5 445 aa17.25■□□□□ 0.35
PPFIA1-222ENST00000532504 VPS33BQ9H267 617 aa17.25■□□□□ 0.35
PPFIA1-222ENST00000532504 EMILIN3Q9NT22 766 aa17.25■□□□□ 0.35
PPFIA1-222ENST00000532504 SLC9A2Q9UBY0 812 aa17.25■□□□□ 0.35
PPFIA1-222ENST00000532504 TWF2Q6IBS0 349 aaKnown RBP17.25■□□□□ 0.35
PPFIA1-222ENST00000532504 SLC17A8Q8NDX2 589 aa17.25■□□□□ 0.35
PPFIA1-222ENST00000532504 METTL14Q9HCE5 456 aaKnown RBP17.25■□□□□ 0.35
PPFIA1-222ENST00000532504 GPRC5DQ9NZD1 345 aa17.25■□□□□ 0.35
PPFIA1-222ENST00000532504 PCDHAC2Q9Y5I4 1007 aa17.25■□□□□ 0.35
PPFIA1-222ENST00000532504 SLC25A27O95847 323 aa17.25■□□□□ 0.35
PPFIA1-222ENST00000532504 QARSP47897 775 aaKnown RBP17.25■□□□□ 0.35
PPFIA1-222ENST00000532504 TYW1BQ6NUM6 668 aa17.25■□□□□ 0.35
PPFIA1-222ENST00000532504 DDX4Q9NQI0 724 aaKnown RBP17.25■□□□□ 0.35
PPFIA1-222ENST00000532504 TNNC1P63316 161 aa17.25■□□□□ 0.35
PPFIA1-222ENST00000532504 GRIK5Q16478 980 aa17.25■□□□□ 0.35
PPFIA1-222ENST00000532504 APOBEC3HQ6NTF7 200 aaKnown RBP17.25■□□□□ 0.35
PPFIA1-222ENST00000532504 FAM186BQ8IYM0 893 aa17.25■□□□□ 0.35
PPFIA1-222ENST00000532504 TRIML1Q8N9V2 468 aa17.25■□□□□ 0.35
PPFIA1-222ENST00000532504 ANKRD36BP1Q96IX9 119 aa17.25■□□□□ 0.35
PPFIA1-222ENST00000532504 NXF1Q9UBU9 619 aaKnown RBP17.25■□□□□ 0.35
PPFIA1-222ENST00000532504 ZNF771Q7L3S4 317 aaPredicted RBP17.24■□□□□ 0.35
PPFIA1-222ENST00000532504 ZFPM1Q8IX07 1006 aa17.24■□□□□ 0.35
PPFIA1-222ENST00000532504 CDCA5Q96FF9 252 aa17.24■□□□□ 0.35
PPFIA1-222ENST00000532504 XPO4Q9C0E2 1151 aaKnown RBP17.24■□□□□ 0.35
PPFIA1-222ENST00000532504 GPT2Q8TD30 523 aa17.24■□□□□ 0.35
PPFIA1-222ENST00000532504 JPH1Q9HDC5 661 aaPredicted RBP17.24■□□□□ 0.35
PPFIA1-222ENST00000532504 BCCIPQ9P287 314 aaKnown RBP eCLIP17.24■□□□□ 0.357e-7■■■■■ 59.6
PPFIA1-222ENST00000532504 HESX1Q9UBX0 185 aa17.24■□□□□ 0.35
PPFIA1-222ENST00000532504 NFAT5O94916 1531 aa17.24■□□□□ 0.35
PPFIA1-222ENST00000532504 LACTBP83111 547 aaPredicted RBP17.24■□□□□ 0.35
PPFIA1-222ENST00000532504 USP50Q70EL3 339 aaPredicted RBP17.24■□□□□ 0.35
PPFIA1-222ENST00000532504 FAM83AQ86UY5 434 aa17.24■□□□□ 0.35
PPFIA1-222ENST00000532504 TCP11Q8WWU5 503 aa17.24■□□□□ 0.35
PPFIA1-222ENST00000532504 LXNQ9BS40 222 aa17.24■□□□□ 0.35
PPFIA1-222ENST00000532504 IFT172Q9UG01 1749 aa17.24■□□□□ 0.35
PPFIA1-222ENST00000532504 SLIT3O75094 1523 aa17.24■□□□□ 0.35
PPFIA1-222ENST00000532504 EIF3JO75822 258 aaKnown RBP17.24■□□□□ 0.35
PPFIA1-222ENST00000532504 P4HBP07237 508 aaKnown RBP17.24■□□□□ 0.35
PPFIA1-222ENST00000532504 STAT1P42224 750 aa17.24■□□□□ 0.35
PPFIA1-222ENST00000532504 FCGRTP55899 365 aa17.24■□□□□ 0.35
PPFIA1-222ENST00000532504 RNASE9P60153 205 aaKnown RBP17.23■□□□□ 0.35
PPFIA1-222ENST00000532504 IPO4Q8TEX9 1081 aaKnown RBP17.23■□□□□ 0.35
PPFIA1-222ENST00000532504 LRRC45Q96CN5 670 aa17.23■□□□□ 0.35
PPFIA1-222ENST00000532504 MSTO1Q9BUK6 570 aa17.23■□□□□ 0.35
PPFIA1-222ENST00000532504 TMEM206Q9H813 350 aa17.23■□□□□ 0.35
PPFIA1-222ENST00000532504 PPP2R3BQ9Y5P8 575 aa17.23■□□□□ 0.35
PPFIA1-222ENST00000532504 DENND3A2RUS2 1198 aa17.23■□□□□ 0.35
PPFIA1-222ENST00000532504 FAM205CA6NFA0 338 aa17.23■□□□□ 0.35
PPFIA1-222ENST00000532504 CASP1P29466 404 aa17.23■□□□□ 0.35
PPFIA1-222ENST00000532504 POLR2FP61218 127 aaKnown RBP17.23■□□□□ 0.35
PPFIA1-222ENST00000532504 CNOT6LQ96LI5 555 aaKnown RBP17.23■□□□□ 0.35
PPFIA1-222ENST00000532504 CTAGE9A4FU28 777 aa17.23■□□□□ 0.35
PPFIA1-222ENST00000532504 SFNP31947 248 aa17.23■□□□□ 0.35
PPFIA1-222ENST00000532504 TKFCQ3LXA3 575 aa17.23■□□□□ 0.35
PPFIA1-222ENST00000532504 CYP26C1Q6V0L0 522 aa17.23■□□□□ 0.35
PPFIA1-222ENST00000532504 PSPC1Q8WXF1 523 aaKnown RBP17.23■□□□□ 0.35
PPFIA1-222ENST00000532504 PCDHA10Q9Y5I2 948 aa17.23■□□□□ 0.35
PPFIA1-222ENST00000532504 N4BP1O75113 896 aaKnown RBP17.23■□□□□ 0.35
PPFIA1-222ENST00000532504 VIL1P09327 827 aaKnown RBP17.23■□□□□ 0.35
PPFIA1-222ENST00000532504 PAGE5Q96GU1 130 aa17.23■□□□□ 0.35
PPFIA1-222ENST00000532504 PGK2P07205 417 aa17.22■□□□□ 0.35
PPFIA1-222ENST00000532504 ABCB4P21439 1286 aa17.22■□□□□ 0.35
PPFIA1-222ENST00000532504 PSMC2P35998 433 aaKnown RBP17.22■□□□□ 0.35
PPFIA1-222ENST00000532504 ZNF75DP51815 510 aa17.22■□□□□ 0.35
PPFIA1-222ENST00000532504 GTF3C2Q8WUA4 911 aaPredicted RBP17.22■□□□□ 0.35
PPFIA1-222ENST00000532504 PIK3C2AO00443 1686 aa17.22■□□□□ 0.35
PPFIA1-222ENST00000532504 KBTBD13C9JR72 458 aa17.22■□□□□ 0.35
PPFIA1-222ENST00000532504 CAPN9O14815 690 aa17.22■□□□□ 0.35
PPFIA1-222ENST00000532504 MAGEA1P43355 309 aa17.22■□□□□ 0.35
PPFIA1-222ENST00000532504 STAT5BP51692 787 aa17.22■□□□□ 0.35
PPFIA1-222ENST00000532504 MYL7Q01449 175 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms