RNA–Protein interactions for RNA: ENST00000532149.1

CHD7-211, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-211ENST00000532149 PLA2G4BP0C869 781 aa13.67□□□□□ -0.22
CHD7-211ENST00000532149 PBX1P40424 430 aa13.67□□□□□ -0.22
CHD7-211ENST00000532149 COPB1P53618 953 aaKnown RBP13.67□□□□□ -0.22
CHD7-211ENST00000532149 PTPN14Q15678 1187 aa13.67□□□□□ -0.22
CHD7-211ENST00000532149 FIGNQ5HY92 759 aa13.67□□□□□ -0.22
CHD7-211ENST00000532149 TTI2Q6NXR4 508 aa13.67□□□□□ -0.22
CHD7-211ENST00000532149 APTXQ7Z2E3 356 aaKnown RBP13.67□□□□□ -0.22
CHD7-211ENST00000532149 MYOCDQ8IZQ8 938 aa13.67□□□□□ -0.22
CHD7-211ENST00000532149 RDM1Q8NG50 284 aa13.67□□□□□ -0.22
CHD7-211ENST00000532149 STAMQ92783 540 aa13.67□□□□□ -0.22
CHD7-211ENST00000532149 LENG9Q96B70 501 aa13.67□□□□□ -0.22
CHD7-211ENST00000532149 TIPINQ9BVW5 301 aa13.67□□□□□ -0.22
CHD7-211ENST00000532149 EDEM3Q9BZQ6 932 aa13.67□□□□□ -0.22
CHD7-211ENST00000532149 TBC1D22BQ9NU19 505 aa13.67□□□□□ -0.22
CHD7-211ENST00000532149 PYCARDQ9ULZ3 195 aa13.67□□□□□ -0.22
CHD7-211ENST00000532149 FRMPD4Q14CM0 1322 aa13.66□□□□□ -0.22
CHD7-211ENST00000532149 IGLV3-22A0A075B6J6 115 aa13.66□□□□□ -0.22
CHD7-211ENST00000532149 FRMD3A2A2Y4 597 aa13.66□□□□□ -0.22
CHD7-211ENST00000532149 MYMKA6NI61 221 aa13.66□□□□□ -0.22
CHD7-211ENST00000532149 UNCXA6NJT0 531 aa13.66□□□□□ -0.22
CHD7-211ENST00000532149 LGALS16A8MUM7 142 aa13.66□□□□□ -0.22
CHD7-211ENST00000532149 MSH4O15457 936 aa13.66□□□□□ -0.22
CHD7-211ENST00000532149 EYA4O95677 639 aa13.66□□□□□ -0.22
CHD7-211ENST00000532149 EMP3P54852 163 aa13.66□□□□□ -0.22
CHD7-211ENST00000532149 FKBP3Q00688 224 aaKnown RBP13.66□□□□□ -0.22
CHD7-211ENST00000532149 SPIRE1Q08AE8 756 aa13.66□□□□□ -0.22
CHD7-211ENST00000532149 MCM6Q14566 821 aa13.66□□□□□ -0.22
CHD7-211ENST00000532149 KRT31Q15323 416 aa13.66□□□□□ -0.22
CHD7-211ENST00000532149 EPHA7Q15375 998 aa13.66□□□□□ -0.22
CHD7-211ENST00000532149 TBC1D10BQ4KMP7 808 aaPredicted RBP13.66□□□□□ -0.22
CHD7-211ENST00000532149 FKBP15Q5T1M5 1219 aa13.66□□□□□ -0.22
CHD7-211ENST00000532149 PCNX4Q63HM2 1172 aa13.66□□□□□ -0.22
CHD7-211ENST00000532149 ARMCX5Q6P1M9 558 aa13.66□□□□□ -0.22
CHD7-211ENST00000532149 TMTC1Q8IUR5 882 aa13.66□□□□□ -0.22
CHD7-211ENST00000532149 TRMT44Q8IYL2 757 aaKnown RBP13.66□□□□□ -0.22
CHD7-211ENST00000532149 CCAR2Q8N163 923 aaKnown RBP13.66□□□□□ -0.22
CHD7-211ENST00000532149 SLC17A8Q8NDX2 589 aa13.66□□□□□ -0.22
CHD7-211ENST00000532149 ZC3H15Q8WU90 426 aaKnown RBP13.66□□□□□ -0.22
CHD7-211ENST00000532149 CDHR1Q96JP9 859 aa13.66□□□□□ -0.22
CHD7-211ENST00000532149 NACC1Q96RE7 527 aa13.66□□□□□ -0.22
CHD7-211ENST00000532149 MED15Q96RN5 788 aa13.66□□□□□ -0.22
CHD7-211ENST00000532149 BAG1Q99933 345 aaPredicted RBP13.66□□□□□ -0.22
CHD7-211ENST00000532149 MXRA8Q9BRK3 442 aa13.66□□□□□ -0.22
CHD7-211ENST00000532149 TEKT3Q9BXF9 490 aa13.66□□□□□ -0.22
CHD7-211ENST00000532149 ADARB2Q9NS39 739 aaKnown RBP13.66□□□□□ -0.22
CHD7-211ENST00000532149 PANK4Q9NVE7 773 aa13.66□□□□□ -0.22
CHD7-211ENST00000532149 TMOD4Q9NZQ9 345 aa13.66□□□□□ -0.22
CHD7-211ENST00000532149 TCEAL9Q9UHQ7 104 aa13.66□□□□□ -0.22
CHD7-211ENST00000532149 KCNG1Q9UIX4 513 aa13.66□□□□□ -0.22
CHD7-211ENST00000532149 KIAA1024Q9UPX6 916 aa13.66□□□□□ -0.22
CHD7-211ENST00000532149 COL4A3BPQ9Y5P4 624 aa13.66□□□□□ -0.22
CHD7-211ENST00000532149 RPTORQ8N122 1335 aa13.65□□□□□ -0.22
CHD7-211ENST00000532149 PPP1R12BO60237 982 aaPredicted RBP13.65□□□□□ -0.22
CHD7-211ENST00000532149 GAS7O60861 476 aa13.65□□□□□ -0.22
CHD7-211ENST00000532149 PSMD10O75832 226 aa13.65□□□□□ -0.22
CHD7-211ENST00000532149 PTPRAP18433 802 aa13.65□□□□□ -0.22
CHD7-211ENST00000532149 FECHP22830 423 aa13.65□□□□□ -0.22
CHD7-211ENST00000532149 ABCD1P33897 745 aa13.65□□□□□ -0.22
CHD7-211ENST00000532149 PRELPP51888 382 aa13.65□□□□□ -0.22
CHD7-211ENST00000532149 STX17P56962 302 aa13.65□□□□□ -0.22
CHD7-211ENST00000532149 LRMPQ12912 555 aa13.65□□□□□ -0.22
CHD7-211ENST00000532149 COG2Q14746 738 aa13.65□□□□□ -0.22
CHD7-211ENST00000532149 EDRF1Q3B7T1 1238 aa13.65□□□□□ -0.22
CHD7-211ENST00000532149 SH3D19Q5HYK7 790 aa13.65□□□□□ -0.22
CHD7-211ENST00000532149 FAM26FQ5R3K3 315 aa13.65□□□□□ -0.22
CHD7-211ENST00000532149 LRCH2Q5VUJ6 765 aa13.65□□□□□ -0.22
CHD7-211ENST00000532149 OTOP1Q7RTM1 612 aa13.65□□□□□ -0.22
CHD7-211ENST00000532149 SAMD7Q7Z3H4 446 aa13.65□□□□□ -0.22
CHD7-211ENST00000532149 MB21D1Q8N884 522 aa13.65□□□□□ -0.22
CHD7-211ENST00000532149 ZNF397Q8NF99 534 aaPredicted RBP13.65□□□□□ -0.22
CHD7-211ENST00000532149 KIF18AQ8NI77 898 aa13.65□□□□□ -0.22
CHD7-211ENST00000532149 DNAJC19Q96DA6 116 aa13.65□□□□□ -0.22
CHD7-211ENST00000532149 KLRG1Q96E93 195 aa13.65□□□□□ -0.22
CHD7-211ENST00000532149 SRRTQ9BXP5 876 aaKnown RBP13.65□□□□□ -0.22
CHD7-211ENST00000532149 NUCKS1Q9H1E3 243 aaKnown RBP13.65□□□□□ -0.22
CHD7-211ENST00000532149 ZNHIT6Q9NWK9 470 aaKnown RBP13.65□□□□□ -0.22
CHD7-211ENST00000532149 FAM184BQ9ULE4 1060 aa13.65□□□□□ -0.22
CHD7-211ENST00000532149 ADAMTS5Q9UNA0 930 aa13.65□□□□□ -0.22
CHD7-211ENST00000532149 GDAQ9Y2T3 454 aa13.65□□□□□ -0.22
CHD7-211ENST00000532149 UBE4BO95155 1302 aa13.64□□□□□ -0.23
CHD7-211ENST00000532149 FAM86B1E9PN63 330 aa13.64□□□□□ -0.23
CHD7-211ENST00000532149 DYNC1I1O14576 645 aa13.64□□□□□ -0.23
CHD7-211ENST00000532149 FLOT1O75955 427 aa13.64□□□□□ -0.23
CHD7-211ENST00000532149 KRT18P05783 430 aaKnown RBP13.64□□□□□ -0.23
CHD7-211ENST00000532149 FAM86B2P0C5J1 330 aa13.64□□□□□ -0.23
CHD7-211ENST00000532149 SLURP2P0DP57 97 aa13.64□□□□□ -0.23
CHD7-211ENST00000532149 SCP2P22307 547 aa13.64□□□□□ -0.23
CHD7-211ENST00000532149 RPL13P26373 211 aaKnown RBP13.64□□□□□ -0.23
CHD7-211ENST00000532149 CASP1P29466 404 aa13.64□□□□□ -0.23
CHD7-211ENST00000532149 GTF2F1P35269 517 aaKnown RBP eCLIP13.64□□□□□ -0.23
CHD7-211ENST00000532149 COPB2P35606 906 aa13.64□□□□□ -0.23
CHD7-211ENST00000532149 SLC12A3P55017 1021 aa13.64□□□□□ -0.23
CHD7-211ENST00000532149 STK4Q13043 487 aa13.64□□□□□ -0.23
CHD7-211ENST00000532149 ALCAMQ13740 583 aa13.64□□□□□ -0.23
CHD7-211ENST00000532149 TUBB2AQ13885 445 aa13.64□□□□□ -0.23
CHD7-211ENST00000532149 SHROOM1Q2M3G4 852 aaPredicted RBP13.64□□□□□ -0.23
CHD7-211ENST00000532149 CCDC174Q6PII3 467 aa13.64□□□□□ -0.23
CHD7-211ENST00000532149 MTERF4Q7Z6M4 381 aaKnown RBP13.64□□□□□ -0.23
CHD7-211ENST00000532149 CATSPER3Q86XQ3 398 aa13.64□□□□□ -0.23
CHD7-211ENST00000532149 TXLNBQ8N3L3 684 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 1397 ms