RNA–Protein interactions for RNA: ENST00000508071.1

CLDND1-217, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 556 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-217ENST00000508071 DSCC1Q9BVC3 393 aa20.87■□□□□ 0.93
CLDND1-217ENST00000508071 TUT1Q9H6E5 874 aaKnown RBP20.87■□□□□ 0.93
CLDND1-217ENST00000508071 H3BNC9 293 aa20.86■□□□□ 0.93
CLDND1-217ENST00000508071 H3BQ06 376 aaPredicted RBP20.86■□□□□ 0.93
CLDND1-217ENST00000508071 GCOM1H8Y6P7 765 aaPredicted RBP20.86■□□□□ 0.93
CLDND1-217ENST00000508071 TREHO43280 583 aa20.86■□□□□ 0.93
CLDND1-217ENST00000508071 UPP2O95045 317 aa20.86■□□□□ 0.93
CLDND1-217ENST00000508071 POLR2MP0CAP2 368 aa20.86■□□□□ 0.93
CLDND1-217ENST00000508071 SMIM10L2AP0DMW4 78 aa20.86■□□□□ 0.93
CLDND1-217ENST00000508071 SMIM10L2BP0DMW5 78 aa20.86■□□□□ 0.93
CLDND1-217ENST00000508071 TRAF1Q13077 416 aa20.86■□□□□ 0.93
CLDND1-217ENST00000508071 GPM6BQ13491 265 aa20.86■□□□□ 0.93
CLDND1-217ENST00000508071 BANK1Q8NDB2 785 aa20.86■□□□□ 0.93
CLDND1-217ENST00000508071 TOP1MTQ969P6 601 aa20.86■□□□□ 0.93
CLDND1-217ENST00000508071 MTMR8Q96EF0 704 aa20.86■□□□□ 0.93
CLDND1-217ENST00000508071 BAZ2BQ9UIF8 2168 aaKnown RBP20.85■□□□□ 0.93
CLDND1-217ENST00000508071 HIP1O00291 1037 aa20.85■□□□□ 0.93
CLDND1-217ENST00000508071 NOP56O00567 594 aaKnown RBP20.85■□□□□ 0.93
CLDND1-217ENST00000508071 CAND2O75155 1236 aa20.85■□□□□ 0.93
CLDND1-217ENST00000508071 LGALS2P05162 132 aa20.85■□□□□ 0.93
CLDND1-217ENST00000508071 CTSHP09668 335 aa20.85■□□□□ 0.93
CLDND1-217ENST00000508071 HOXC8P31273 242 aa20.85■□□□□ 0.93
CLDND1-217ENST00000508071 CSPP1Q1MSJ5 1256 aa20.85■□□□□ 0.93
CLDND1-217ENST00000508071 B4GALNT3Q6L9W6 998 aa20.85■□□□□ 0.93
CLDND1-217ENST00000508071 EP400NLQ6ZTU2 488 aa20.85■□□□□ 0.93
CLDND1-217ENST00000508071 FCHSD1Q86WN1 690 aa20.85■□□□□ 0.93
CLDND1-217ENST00000508071 HOMER1Q86YM7 354 aa20.85■□□□□ 0.93
CLDND1-217ENST00000508071 TMEM192Q8IY95 271 aa20.85■□□□□ 0.93
CLDND1-217ENST00000508071 GPKOWQ92917 476 aaPredicted RBP eCLIP20.85■□□□□ 0.93
CLDND1-217ENST00000508071 ZFP91Q96JP5 570 aaPredicted RBP20.85■□□□□ 0.93
CLDND1-217ENST00000508071 UIMC1Q96RL1 719 aa20.85■□□□□ 0.93
CLDND1-217ENST00000508071 MAD2L2Q9UI95 211 aa20.85■□□□□ 0.93
CLDND1-217ENST00000508071 FAM50BQ9Y247 325 aa20.85■□□□□ 0.93
CLDND1-217ENST00000508071 MYO7AQ13402 2215 aa20.85■□□□□ 0.93
CLDND1-217ENST00000508071 RALGAPA2Q2PPJ7 1873 aa20.84■□□□□ 0.93
CLDND1-217ENST00000508071 GNAT1P11488 350 aa20.84■□□□□ 0.93
CLDND1-217ENST00000508071 GNPTABQ3T906 1256 aa20.84■□□□□ 0.93
CLDND1-217ENST00000508071 TCEAL5Q5H9L2 206 aa20.84■□□□□ 0.93
CLDND1-217ENST00000508071 PABPC5Q96DU9 382 aaKnown RBP20.84■□□□□ 0.93
CLDND1-217ENST00000508071 RNPEPQ9H4A4 650 aa20.84■□□□□ 0.93
CLDND1-217ENST00000508071 NSUN3Q9H649 340 aaKnown RBP20.84■□□□□ 0.93
CLDND1-217ENST00000508071 KAT6AQ92794 2004 aa20.83■□□□□ 0.93
CLDND1-217ENST00000508071 PLEKHM2Q8IWE5 1019 aa20.83■□□□□ 0.93
CLDND1-217ENST00000508071 APBB2Q92870 758 aa20.83■□□□□ 0.93
CLDND1-217ENST00000508071 USP26Q9BXU7 913 aa20.83■□□□□ 0.93
CLDND1-217ENST00000508071 IFIH1Q9BYX4 1025 aaKnown RBP20.83■□□□□ 0.93
CLDND1-217ENST00000508071 OSBPL3Q9H4L5 887 aa20.83■□□□□ 0.93
CLDND1-217ENST00000508071 COL4A6Q14031 1691 aa20.83■□□□□ 0.92
CLDND1-217ENST00000508071 DOCK5Q9H7D0 1870 aa20.82■□□□□ 0.92
CLDND1-217ENST00000508071 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.82■□□□□ 0.92
CLDND1-217ENST00000508071 PALM3A6NDB9 673 aaPredicted RBP20.82■□□□□ 0.92
CLDND1-217ENST00000508071 NEDD9Q14511 834 aa20.82■□□□□ 0.92
CLDND1-217ENST00000508071 SEC23AQ15436 765 aa20.82■□□□□ 0.92
CLDND1-217ENST00000508071 METTL7BQ6UX53 244 aa20.82■□□□□ 0.92
CLDND1-217ENST00000508071 DCXO43602 365 aa20.81■□□□□ 0.92
CLDND1-217ENST00000508071 CHD1LQ86WJ1 897 aa20.81■□□□□ 0.92
CLDND1-217ENST00000508071 SMC5Q8IY18 1101 aa20.81■□□□□ 0.92
CLDND1-217ENST00000508071 PIGSQ96S52 555 aa20.81■□□□□ 0.92
CLDND1-217ENST00000508071 OSBPL7Q9BZF2 842 aa20.81■□□□□ 0.92
CLDND1-217ENST00000508071 RWDD1Q9H446 243 aaPredicted RBP20.81■□□□□ 0.92
CLDND1-217ENST00000508071 BCAS3Q9H6U6 928 aa20.81■□□□□ 0.92
CLDND1-217ENST00000508071 SETD4Q9NVD3 440 aa20.81■□□□□ 0.92
CLDND1-217ENST00000508071 ZNF215Q9UL58 517 aaPredicted RBP20.81■□□□□ 0.92
CLDND1-217ENST00000508071 STAM2O75886 525 aa20.8■□□□□ 0.92
CLDND1-217ENST00000508071 CYB5R4Q7L1T6 521 aa20.8■□□□□ 0.92
CLDND1-217ENST00000508071 CYFIP1Q7L576 1253 aa20.8■□□□□ 0.92
CLDND1-217ENST00000508071 ALYREFQ86V81 257 aaKnown RBP20.8■□□□□ 0.92
CLDND1-217ENST00000508071 FIBCD1Q8N539 461 aa20.8■□□□□ 0.92
CLDND1-217ENST00000508071 IL17RAQ96F46 866 aa20.8■□□□□ 0.92
CLDND1-217ENST00000508071 GPR20Q99678 358 aa20.8■□□□□ 0.92
CLDND1-217ENST00000508071 RIOX1Q9H6W3 641 aa20.8■□□□□ 0.92
CLDND1-217ENST00000508071 CLDND1Q9NY35 253 aa20.8■□□□□ 0.92
CLDND1-217ENST00000508071 PRKAG3Q9UGI9 489 aa20.8■□□□□ 0.92
CLDND1-217ENST00000508071 NCK2O43639 380 aa20.79■□□□□ 0.92
CLDND1-217ENST00000508071 ICAM3P32942 547 aa20.79■□□□□ 0.92
CLDND1-217ENST00000508071 CTNNB1P35222 781 aa20.79■□□□□ 0.92
CLDND1-217ENST00000508071 ARHGAP4P98171 946 aa20.79■□□□□ 0.92
CLDND1-217ENST00000508071 ZP2Q05996 745 aa20.79■□□□□ 0.92
CLDND1-217ENST00000508071 TRDNQ13061 729 aa20.79■□□□□ 0.92
CLDND1-217ENST00000508071 GRM4Q14833 912 aa20.79■□□□□ 0.92
CLDND1-217ENST00000508071 COL19A1Q14993 1142 aa20.79■□□□□ 0.92
CLDND1-217ENST00000508071 INPP4AQ96PE3 977 aaPredicted RBP20.79■□□□□ 0.92
CLDND1-217ENST00000508071 PNMA6FA0A0J9YX94 578 aa20.78■□□□□ 0.92
CLDND1-217ENST00000508071 SPATA31C2B4DYI2 1134 aa20.78■□□□□ 0.92
CLDND1-217ENST00000508071 FIBPO43427 364 aa20.78■□□□□ 0.92
CLDND1-217ENST00000508071 MRPS9P82933 396 aaKnown RBP20.78■□□□□ 0.92
CLDND1-217ENST00000508071 SLC35G1Q2M3R5 365 aa20.78■□□□□ 0.92
CLDND1-217ENST00000508071 FAM26DQ5JW98 314 aa20.78■□□□□ 0.92
CLDND1-217ENST00000508071 UTP14CQ5TAP6 766 aaKnown RBP20.78■□□□□ 0.92
CLDND1-217ENST00000508071 TRIM50Q86XT4 487 aa20.78■□□□□ 0.92
CLDND1-217ENST00000508071 RTEL1Q9NZ71 1219 aa20.78■□□□□ 0.92
CLDND1-217ENST00000508071 FRMPD4Q14CM0 1322 aa20.78■□□□□ 0.92
CLDND1-217ENST00000508071 C5orf42Q9H799 3197 aa20.77■□□□□ 0.92
CLDND1-217ENST00000508071 ATG2AQ2TAZ0 1938 aa20.77■□□□□ 0.92
CLDND1-217ENST00000508071 RB1P06400 928 aa20.77■□□□□ 0.92
CLDND1-217ENST00000508071 NUCB1Q02818 461 aa20.77■□□□□ 0.92
CLDND1-217ENST00000508071 AAMPQ13685 434 aa20.77■□□□□ 0.92
CLDND1-217ENST00000508071 RPAINQ86UA6 219 aa20.77■□□□□ 0.92
CLDND1-217ENST00000508071 ADHFE1Q8IWW8 467 aa20.77■□□□□ 0.92
CLDND1-217ENST00000508071 LMBR1Q8WVP7 490 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms